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* gnu: rav1e: Update to 0.5.1; also update rust-aom-sys to 0.3.0.Maxim Cournoyer2022-01-10
| | | | | | | | | | | | | | | * gnu/packages/crates-graphics.scm (rust-aom-sys-0.2): Rename to... (rust-aom-sys-0.3): ... this, updating to 0.3.0. (rust-aom-sys-0.1): Delete unused variable. * gnu/packages/video.scm (rav1e): Update to 0.5.1. [cargo-test-flags]: New argument. [cargo-inputs]: Add rust-aom-sys-0.3. Update rust-arrayvec and rust-av-metrics to 0.7. Update rust-rustc-version to 0.4. Update rust-dav1d-sys to 0.3.4. [cargo-development-inputs]: Update rust-assert-cmd to 2. Update rust-pretty-assertions to 0.7. Update rust-semver to 1. [phases]{relax-versions}: New phase.
* gnu: rust-av-metrics: Update to 0.7.2. Also update rust-lab to 0.11.0.Maxim Cournoyer2022-01-10
| | | | | | | | | | | | | * gnu/packages/crates-io.scm (rust-lab-0.8): Update to 0.11.0, rename to... (rust-lab-0.11): ... this. [cargo-development-inputs]: Update rust-approx to 0.5, rust-pretty-assertions to 0.7 and rust-rand to 0.8. (rust-lab-0.7): Adjust accordingly. (rust-lab-0.4): Inherit from rust-lab-0.7 and fix source field indentation. (rust-av-metrics-0.6): Update to 0.7.2, renaming it to... (rust-av-metrics-0.7): ... this. [cargo-inputs]: Update rust-lab to 0.11. [cargo-development-inputs]: Add rust-criterion-0.3 and rust-y4m-0.7.
* gnu: rust-v-frame-0.2: Update to 0.2.5.Maxim Cournoyer2022-01-10
| | | | | | * gnu/packages/crates-io.scm (rust-v-frame-0.2): Update to 0.2.5. [skip-build?]: Remove argument. [cargo-inputs]: Add rust-rust-hawktracer-0.7 and rust-rayon-1.
* gnu: Add rust-rustc-version-0.4.Maxim Cournoyer2022-01-10
| | | | | * gnu/packages/crates-io.scm (rust-rustc-version-0.4): New variable. (rust-rustc-version-0.3): Inherit from the above.
* gnu: Add rust-concolor-control.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/crates-io.scm (rust-concolor-control): New variable.
* gnu: Add rust-concolor-query.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/crates-io.scm (rust-concolor-query): New variable.
* gnu: Add rust-cfg-expr-0.8.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/crates-io.scm (rust-cfg-expr-0.8): New variable.
* gnu: mozjs-78: Disable rust-simd to workaround a build failure.Maxim Cournoyer2022-01-10
| | | | | | * gnu/packages/gnuzilla.scm (mozjs-78) [configure-flags]: Disable rust-simd to avoid a build failure that occurs when Rust is newer than 1.54.0.
* build/python: Improve error output in sanity check.Hartmut Goebel2022-01-10
| | | | | | | | Instead of printing the "str()" representation of the excaption, print the "repr()" representation. This will print the name of the exception and thus ease understanding the actual error. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: rust: Use rust-1.57.0.Maxim Cournoyer2022-01-10
| | | | | | | | * gnu/packages/rust.scm (rust-1.54): Make it a private variable. Move definition to... (rust-1.57): ... here. (rust-1.55, rust-1.56): Make private. * gnu/packages/shells.scm (nushell)[rust]: Remove argument.
* gnu: simple-scan: Add python to native inputs.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/gnome.scm (simple-scan)[native-inputs]: Add python.
* gnu: gnome-calculator: Add python to native inputs.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/gnome.scm (gnome-calculator)[native-inputs]: Add python.
* gnu: gnome-screenshot: Add python to native inputs.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/gnome.scm (gnome-screenshot)[native-inputs]: Add python.
* gnu: file-roller: Add python to native inputs.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/gnome.scm (file-roller)[native-inputs]: Add python.
* gnu: python-pandas: Update to 1.3.5.Maxim Cournoyer2022-01-10
| | | | | | | | * gnu/packages/python-science.scm (python-pandas): Update to 1.3.5. [phases]{check}: Add a reference to the network accessing tests issue, now reported upstream. Reinstate the excelwriter tests. [propagated-inputs]: Add python-xlsxwriter. [native-inputs]: Remove python-nose.
* gnu: python-xlwt: Add comment about maintainership of the package.Maxim Cournoyer2022-01-10
| | | | | | The package appears to be abandoned. * gnu/packages/python-xyz.scm (python-xlwt): Add comment.
* gnu: python-openpyxl: Update to 3.0.9.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/python-xyz.scm (python-openpyxl): Update to 3.0.9.
* gnu: python-xlrd: Update to 2.0.1.Maxim Cournoyer2022-01-10
| | | | | | | * gnu/packages/python-xyz.scm (python-xlrd): Update to 2.0.1. [source]: Use git-fetch. [arguments]: Delete field. [native-inputs]: Add python-pytest.
* gnu: mutter: Add python to native inputs.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/gnome.scm (mutter)[native-inputs]: Add python.
* gnu: libgweather: Add python to native inputs.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/gnome.scm (libgweather)[native-inputs]: Add python.
* gnu: baobab: Add python to native inputs.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/gnome.scm (baobab)[native-inputs]: Add python.
* gnu: python-pytest-timeout: Update to 2.0.2.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/check.scm (python-pytest-timeout): Update to 2.0.2.
* gnu: binutils: Fix CVE-2021-45078.Leo Famulari2022-01-10
| | | | | | | | | | | | | | This is for the release branch. Should we also use a graft for the master branch? It would be even better if we could add a binutils-next package that users could install, in my opinion. * gnu/packages/patches/binutils-CVE-2021-45078.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/base.scm (binutils)[source]: Use it. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: glib: Update to 2.70.2.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/glib.scm (glib): Update to 2.70.2.
* gnu: meson: Update to 0.60.3.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/build-tools.scm (gn): Update to 0.60.3.
* gnu: glibmm: Update to 2.70.0 and apply guix style.Maxim Cournoyer2022-01-10
| | | | | * gnu/packages/glib.scm (glibmm): Update to 2.70.0. [native-inputs]: Use new style.
* gnu: cpuid: Remove obsolete file permissions change.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/linux.scm (cpuid)[arguments]<#:phases>{fix-makefile}: Remove Makefile gzip permissions patch. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: pre-commit: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/version-control.scm (pre-commit)[arguments]<#:phases>: Remove 'make-gz-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: go-github-com-prometheus-common: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/syncthing.scm (go-github-com-prometheus-common) [arguments]<#:phases>: Remove 'make-gzip-archive-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: python-pdfminer-six: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/python-xyz.scm (python-pdfminer-six)[arguments] <#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: arcanist: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/phabricator.scm (arcanist)[arguments]<#:phases>: Remove 'make-compressed-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: helm: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/music.scm (helm)[arguments]<#:phases>: Remove 'make-gz-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: lmms: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/music.scm (lmms)[arguments]<#:phases>: Remove 'make-manpages-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: jalv-select: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/music.scm (jalv-select)[arguments]<#:phases>: Remove 'make-manpages-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: python-scikit-learn: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn)[arguments] <#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: go-ipfs: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/ipfs.scm (go-ipfs)[arguments]<#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: python-plotly: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/graph.scm (python-plotly)[arguments]<#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: go-github-com-gdamore-tcell: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/golang.scm (go-github-com-gdamore-tcell)[arguments] <#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: go-github-com-docker-distribution: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/golang.scm (go-github-com-docker-distribution)[arguments] <#:phases>: Remove 'make-gzip-archive-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: go-golang-org-x-crypto: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/golang.scm (go-golang-org-x-crypto)[arguments]<#:phases>: Remove 'make-gzip-archive-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: po4a: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | * gnu/packages/gettext.scm (po4a)[arguments]<#:phases>: Remove 'make-compressed-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: emacs: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/emacs.scm (emacs)[arguments]<#:phases>: Remove 'make-compressed-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: cups-minimal: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/cups.scm (cups-minimal)[arguments]<#:phases>: Remove 'make-manpages-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: clipper: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/bioinformatics.scm (clipper)[arguments]<#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: python-biom-format: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | * gnu/packages/bioinformatics.scm (python-biom-format)[arguments] <#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* build-system/gnu: Make gzip files writable before resetting timestamps.Sarah Morgensen2022-01-10
| | | | | | | guix/build/gnu-build-system.scm (reset-gzip-timestamps): Ensure gzip files are writable before resetting their timestamps. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: tbb-2020: Use ld.gold to work around segfaults in check phase.Maxim Cournoyer2022-01-10
| | | | | | * gnu/packages/tbb.scm (tbb-2020) [configure-flags]: Use -fuse-ld=gold in CFLAGS. [native-inputs]: Add ld-gold-wrapper.
* gnu: python-igraph: Update to 0.9.8.Maxim Cournoyer2022-01-10
| | | | | | | | | | | * gnu/packages/graph.scm (python-igraph): Update to 0.9.8. [origin]: Fetch from git. [configure-flags]: Delete argument. [phases]{build}: No longer override phase. {check}: Preserve ordering and streamline. {specify-libigraph-location}: New phase. [native-inputs]: Remove pkg-config. [home-page]: Update.
* gnu: igraph: Update to 0.9.5.Maxim Cournoyer2022-01-10
| | | | | | | | | | * gnu/packages/graph.scm (igraph): Update to 0.9.5. [source]: Add snippet to fully unbundle. [build-system]: Use cmake-build-system. [configure-flags]: Replace all by just '-DBUILD_SHARED_LIBS=ON'. [native-inputs]: Add pkg-config. [inputs]{zlib}: Delete input. {arpack-ng, plfit, suitesparse}: New inputs.
* gnu: Add plfit.Maxim Cournoyer2022-01-10
| | | | * gnu/packages/graph.scm (plfit): New variable.
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