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* doc: Clarify special-files-service-type expected value.Bruno Victal2023-03-21
| | | | | | | * doc/guix.texi (Services, Base Services): Clarify special-files-service-type expected value. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* services: configuration: simplify alist? procedure.Bruno Victal2023-03-21
| | | | | | * gnu/services/configuration.scm (alist?): simplify procedure. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: paulxstretch: Patch paths.Sughosha2023-03-21
| | | | | | | | * gnu/packages/music.scm (paulxstretch) [arguments]: Add patch-paths phase. [inputs]: Add dconf, fontconfig and glib:bin. Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: Add python-brian2tools.Lars-Dominik Braun2023-03-21
| | | | * gnu/packages/machine-learning.scm (python-brian2tools): New variable.
* gnu: Add python-libneuroml.Lars-Dominik Braun2023-03-21
| | | | * gnu/packages/python-science.scm (python-libneuroml): New variable.
* gnu: Add python-pylems.Lars-Dominik Braun2023-03-21
| | | | * gnu/packages/python-science.scm (python-pylems): New variable.
* gnu: Add python-markdown-strings.Lars-Dominik Braun2023-03-21
| | | | * gnu/packages/python-xyz.scm (python-markdown-strings): New variable.
* gnu: r-tibble: Update to 3.2.1.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/statistics.scm (r-tibble): Update to 3.2.1.
* gnu: r-keras: Update to 2.11.1.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-keras): Update to 2.11.1.
* gnu: r-intervals: Update to 0.15.3.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-intervals): Update to 0.15.3.
* gnu: r-maldiquant: Update to 1.22.1.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-maldiquant): Update to 1.22.1.
* gnu: r-metafor: Update to 4.0-0.Ricardo Wurmus2023-03-21
| | | | | | * gnu/packages/cran.scm (r-metafor): Update to 4.0-0. [propagated-inputs]: Add r-numderiv. [native-inputs]: Add r-r-rsp.
* gnu: r-qgraph: Update to 1.9.4.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-qgraph): Update to 1.9.4.
* gnu: r-ggfortify: Update to 0.4.16.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-ggfortify): Update to 0.4.16.
* gnu: r-sf: Update to 1.0-12.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-sf): Update to 1.0-12.
* gnu: r-glmmtmb: Update to 1.1.6.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-glmmtmb): Update to 1.1.6.
* gnu: r-fnn: Update to 1.1.3.2.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-fnn): Update to 1.1.3.2.
* gnu: r-truncnorm: Update to 1.0-9.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-truncnorm): Update to 1.0-9.
* gnu: r-partykit: Update to 1.2-19.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/cran.scm (r-partykit): Update to 1.2-19.
* gnu: r-nmf: Update to 0.26.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/bioconductor.scm (r-nmf): Update to 0.26.
* gnu: sbcl-history-tree: Update to 0.1.1.Pierre Neidhardt2023-03-21
| | | | * gnu/packages/lisp-xyz.scm (sbcl-history-tree): Update to 0.1.1.
* gnu: r-singlecellexperiment: Update to 1.20.1.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.20.1.
* gnu: r-variancepartition: Update to 1.28.9.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.28.9.
* gnu: r-biocparallel: Update to 1.32.6.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.32.6.
* gnu: Add mygnuhealth.Petr Hodina2023-03-20
| | | | | | | | * gnu/packages/medical.scm (mygnuhealth): New variable. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Co-authored-by: Morgan Smith <Morgan.J.Smith@outlook.com> Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: zabbix-agentd: Update to 6.0.14.Kaelyn Takata2023-03-20
| | | | | | * gnu/packages/monitoring.scm (zabbix-agentd): Update to 6.0.14. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: tesseract-ocr: Use standard TESSDATA_PREFIX.Simon South2023-03-20
| | | | | | | | | | * gnu/packages/ocr.scm (tesseract-ocr-tessdata-fast): Install data to 'share/tessdata' prefix rather than 'share/tesseract-ocr/tessdata'. (tesseract-ocr) [arguments]: Delete adjust-TESSDATA_PREFIX-macro. Adjust installation prefix in install-minimal-tessdata phase. [native-search-paths]: Search for files under share/tessdata directly. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* gnu: emacs-magit-gerrit: Update to 0.4-1.a975215.Maxim Cournoyer2023-03-20
| | | | * gnu/packages/emacs-xyz.scm (emacs-magit-gerrit): Update to 0.4-1.a975215.
* gnu: emacs-magit: Update to 3.3.0-4.a760dd1.Maxim Cournoyer2023-03-20
| | | | | | | | This update resolves a problem where configuring a remote would result in the error "Symbol’s function definition is void: transient--with-suspended-override". * gnu/packages/emacs-xyz.scm (emacs-magit): Update to 3.3.0-4.a760dd1.
* gnu: emacs-transient: Update to 0.3.7-1.0ae0de4.Maxim Cournoyer2023-03-20
| | | | | * gnu/packages/emacs-xyz.scm (emacs-transient): Update to 0.3.7-1.0ae0de4. [propagated-inputs]: Remove emacs-dash; add emacs-compat.
* gnu: lepton-eda: Update to 1.9.18-20220529.Ricardo Wurmus2023-03-21
| | | | | | * gnu/packages/engineering.scm (lepton-eda): Update to 1.9.18-20220529. [inputs]: Add guile-readline. [arguments]: Adjust build phase 'fix-dynamic-link; add build phase 'fix-tests.
* gnu: Add ctrlr.Ricardo Wurmus2023-03-21
| | | | * gnu/packages/music.scm (ctrlr): New variable.
* gnu: openjdk10: Apply patch again.Andreas Enge2023-03-20
| | | | | | | This partially reverts commit 7636c49b45adb9870cf416c64bde032ec858a820 where the patch was dropped. * gnu/packages/java.scm (openjdk10)[source]: Apply patch.
* gnu: Add r-annotationhubdata.Mădălin Ionel Patrașcu2023-03-20
| | | | | | * gnu/packages/bioconductor.scm (r-annotationhubdata): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-affylmgui.Mădălin Ionel Patrașcu2023-03-20
| | | | * gnu/packages/bioconductor.scm (r-affylmgui): New variable.
* gnu: Add r-tkrplot.Mădălin Ionel Patrașcu2023-03-20
| | | | | | * gnu/packages/cran.scm (r-tkrplot): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>.
* gnu: Add r-affyplm.Mădălin Ionel Patrașcu2023-03-20
| | | | * gnu/packages/bioconductor.scm (r-affyplm): New variable.
* gnu: Add r-affyilm.Mădălin Ionel Patrașcu2023-03-20
| | | | * gnu/packages/bioconductor.scm (r-affyilm): New variable.
* gnu: python-google-api-client: Update to 1.12.8.Efraim Flashner2023-03-20
| | | | | | | | | | * gnu/packages/python-web.scm (python-google-api-client): Update to 1.12.8. [arguments]: Remove custom phase to adjust setup.py. [native-inputs]: Remove python-oauth2client, python-uritemplate. Move python-httplib2, python-six ... [propagated-inputs]: ... here. Add python-google-api-core-1, python-google-auth-1, python-google-auth-httplib2, python-uritemplate-3.
* gnu: python-googleapis-common-protos: Update to 1.56.4.Efraim Flashner2023-03-20
| | | | | | * gnu/packages/python-web.scm (python-googleapis-common-protos): Update to 1.56.4. [arguments]: Enable test suite.
* gnu: Add python-google-api-core-1.Efraim Flashner2023-03-20
| | | | * gnu/packages/python-web.scm (python-google-api-core-1): New variable.
* gnu: Add python-google-auth-1.Efraim Flashner2023-03-20
| | | | * gnu/packages/python-web.scm (python-google-auth-1): New variable.
* gnu: Add python-google-auth-httplib2.Efraim Flashner2023-03-20
| | | | | * gnu/packages/python-web.scm (python-google-auth-httplib2): New variable.
* gnu: Add python-uritemplate-3.Efraim Flashner2023-03-20
| | | | * gnu/packages/python-web.scm (python-uritemplate-3): New variable.
* gnu: python-httplib2: Update to 0.15.0.Efraim Flashner2023-03-20
| | | | | | | | | | | | * gnu/packages/python-web.scm (python-httplib2): Update to 0.15.0. [source]: Download using git. [arguments]: Add a phase to adjust the test package version requirements. [native-inputs]: Add python-flake8, python-future, python-mock, python-pytest, python-pytest-cov, python-pytest-forked, python-pytest-randomly, python-pytest-timeout, python-pytest-xdist, python-six. [home-page]: Switch to new upstream homepage.
* gnu: zig: Increase max-silent-time.Efraim Flashner2023-03-20
| | | | | * gnu/packages/zig.scm (zig-0.10)[properties]: Set max-silent-time to 3 hours.
* gnu: Add transanno.Ricardo Wurmus2023-03-20
| | | | * gnu/packages/bioinformatics.scm (transanno): New variable.
* gnu: Add rust-autocompress-0.2.Ricardo Wurmus2023-03-20
| | | | * gnu/packages/crates-io.scm (rust-autocompress-0.2): New variable.
* gnu: Add rust-temp-testdir-0.2.Ricardo Wurmus2023-03-20
| | | | * gnu/packages/crates-io.scm (rust-temp-testdir-0.2): New variable.
* gnu: Add rust-bio-0.41.Ricardo Wurmus2023-03-20
| | | | * gnu/packages/crates-io.scm (rust-bio-0.41): New variable.
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