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* gnu: r-s4vectors: Update to 0.28.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.28.1.
* gnu: r-systempiper: Update to 1.24.3.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.24.3.
* gnu: r-gseabase: Update to 1.52.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.52.1.
* gnu: r-genefilter: Update to 1.72.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.72.1.
* gnu: r-delayedmatrixstats: Update to 1.12.3.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.12.3.
* gnu: r-sparsematrixstats: Update to 1.2.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.2.1.
* gnu: r-scran: Update to 1.18.5.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-scran): Update to 1.18.5.
* gnu: r-scuttle: Update to 1.0.4.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-scuttle): Update to 1.0.4.
* gnu: r-beachmat: Update to 2.6.4.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.4.
* gnu: r-rhdf5lib: Update to 1.12.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.1.
* gnu: r-hdf5array: Update to 1.18.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.18.1.
* gnu: r-preprocesscore: Update to 1.52.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.52.1.
* gnu: r-chemminer: Update to 3.42.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.1.
* gnu: r-gdsfmt: Update to 1.26.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.26.1.
* gnu: r-cytolib: Update to 2.2.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-cytolib): Update to 2.2.1.
* gnu: r-multidataset: Update to 1.18.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.1.
* gnu: r-clusterprofiler: Update to 3.18.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.1.
* gnu: r-enrichplot: Update to 1.10.2.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.2.
* gnu: r-matrixgenerics: Update to 1.2.1.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.2.1.
* gnu: r-diffbind: Update to 3.0.13.Ricardo Wurmus2021-02-11
| | | | * gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.13.
* gnu: OpenLDAP: Update to 2.4.57 [security fixes].Leo Famulari2021-02-11
| | | | | | | Fixes CVE-2020-{36221,36222,36223,36224,36225,36226,36226,36228,36229,36230}. * gnu/packages/openldap.scm (openldap-2.4.57): New variable. (openldap)[replacement]: New field.
* gnu: Add wob.Nicolas Goaziou2021-02-11
| | | | * gnu/packages/xdisorg.scm (wob): New variable.
* gnu: Add gammastep.Nicolas Goaziou2021-02-11
| | | | * gnu/packages/xdisorg.scm (gammastep): New variable.
* gnu: Add font-cozette.Julien Lepiller2021-02-11
| | | | * gnu/packages/fonts.scm (font-cozette): New variable.
* gnu: Add python-crayons.Julien Lepiller2021-02-11
| | | | * gnu/packages/python-xyz.scm (python-crayons): New variable.
* gnu: grammalecte: Update to 2.1.0.Nicolas Goaziou2021-02-11
| | | | * gnu/packages/dictionaries.scm (grammalecte): Update to 2.1.0.
* gnu: python-dropbox: Update to 11.2.0.Efraim Flashner2021-02-11
| | | | * gnu/packages/file-systems.scm (python-dropbox): Update to 11.2.0.
* gnu: dbxfs: Update to 1.0.51.Efraim Flashner2021-02-11
| | | | * gnu/packages/file-systems.scm (dbxfs): Update to 1.0.51.
* gnu: texmacs: Update to 1.99.18.Nicolas Goaziou2021-02-11
| | | | * gnu/packages/text-editors.scm (texmacs): Update to 1.99.18.
* gnu: lyx: Update to 2.3.6.1.Nicolas Goaziou2021-02-11
| | | | * gnu/packages/tex.scm (lyx): Update to 2.3.6.1.
* gnu: python-duniterpy: Update to 0.61.0.Nicolas Goaziou2021-02-11
| | | | * gnu/packages/finance.scm (python-duniterpy): Update to 0.61.0.
* gnu: musescore: Update to 3.6.2.Nicolas Goaziou2021-02-11
| | | | * gnu/packages/music.scm (musescore): Update to 3.6.2.
* gnu: emacs-ebdb: Update to 0.6.22.Nicolas Goaziou2021-02-11
| | | | * gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.6.22.
* gnu: visidata: Update to 2.2.1.Ryan Prior2021-02-11
| | | | | | * gnu/packages/visidata.scm (visidata): Update to 2.2.1. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: esbuild: Update to 0.8.43.Ryan Prior2021-02-11
| | | | | | * gnu/packages/web.scm (esbuild): Update to 0.8.43. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: emacs-ztree: Update to 20210210.Pierre Neidhardt2021-02-11
| | | | * gnu/packages/emacs-xyz.scm (emacs-ztree): Update to 20210210.
* gnu: Add tiramisu.Stefan Reichör2021-02-11
| | | | | | * gnu/packages/gnome-xyz.scm (tiramisu): New variable. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: dropbear: Unbundle libraries.Efraim Flashner2021-02-11
| | | | | | | * gnu/packages/ssh.scm (dropbear)[source]: Add snippet to remove libtommath, libtomcrypt. [arguments]: Add configure-flag to not use bundled libraries. [inputs]: Add libtomcrypt, libtommath.
* gnu: libtomcrypt: Patch pkg-config file to pull libtommath.Efraim Flashner2021-02-11
| | | | | * gnu/packages/multiprecision.scm (libtomcrypt)[arguments]: Adjust 'prepare-build phase to patch libtomcrypt.pc to link tommath.
* environment: Allow starting from existing profile.Lars-Dominik Braun2021-02-11
| | | | | | | | * guix/scripts/environment.scm (%options): Add -p/--profile switch. (show-help): Document new switch. (guix-environment): Handle new 'profile switch. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: Add libtomcrypt.Efraim Flashner2021-02-11
| | | | * gnu/packages/multiprecision.scm (libtomcrypt): New variable.
* gnu: lz4: Disable parallel testing.Léo Le Bouter2021-02-11
| | | | | | | * gnu/packages/compression.scm (lz4)[arguments]: Set "#:parallel-tests?" keyword argument to "#f". Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: miredo: Fix creation of .pid file.Léo Le Bouter2021-02-11
| | | | | | | | * gnu/packages/networking.scm (miredo)[arguments]: Add "--localstatedir=/var" to #:configure-flags and add 'do-not-create-/run phase to #:phases to remove code that tries to create a directory inside "@localstatedir@" during install. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: vim: Fix test_signals test.John Doe2021-02-11
| | | | | | * gnu/packages/vim.scm (vim)[arguments]: Add "CFLAGS=-D_REENTRANT" to Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* services: Add 'xorg-server-service-type'.宋文武2021-02-11
| | | | | * gnu/services/xorg.scm (xorg-server-service-type): New service type. (xorg-server-profile-service): New procedure.
* gnu: parted: Update to 3.4.Léo Le Bouter2021-02-11
| | | | | | | * gnu/packages/disk.scm (parted): Update to 3.4. [native-inputs]: Remove python-2 and add python-wrapper to fix tests. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: gajim-openpgp: Update to 1.3.9.Raghav Gururajan2021-02-11
| | | | | | | * gnu/packages/messaging.scm (gajim-openpgp): Update to 1.3.9. [propagated-inputs]: Add python-gpg. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: gajim-omemo: Update to 2.7.13.Raghav Gururajan2021-02-11
| | | | | | * gnu/packages/messaging.scm (gajim-omemo): Update to 2.7.13. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: gajim: Fix credentials management.Raghav Gururajan2021-02-11
| | | | | | | * gnu/packages/messaging.scm (gajim)[inputs]: Remove gnome-keyring. Add libsecret. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* gnu: gajim: Update to 1.3.0.Raghav Gururajan2021-02-11
| | | | | | | * gnu/packages/messaging.scm (gajim): Update to 1.3.0. [arguments]<#:phases>['disable-failing-tests]: New phase. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
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