| Commit message (Collapse) | Author | Age |
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* guix/inferior.scm (open-inferior): Use (ice-9 match).
(inferior-package-input-field, inferior-package-inputs):
(inferior-package-native-inputs)
(inferior-package-propagated-inputs)
(inferior-package-transitive-propagated-inputs): New procedures.
* tests/inferior.scm ("inferior-package-inputs"): New test.
inputs fixlet
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* guix/inferior.scm (<inferior>)[packages, table]: New fields.
(open-inferior): Initialize these new fields.
(inferior-packages): Rename to...
(%inferior-packages): ... this.
(inferior-packages): New procedure; force the promise.
(%inferior-package-table, lookup-inferior-packages): New procedures.
* tests/inferior.scm ("lookup-inferior-packages")
("lookup-inferior-packages and eq?-ness"): New tests.
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* guix/inferior.scm (read-inferior-response)
(send-inferior-request): New procedures.
(inferior-eval): Rewrite in terms of these.
(proxy, inferior-package-derivation, inferior-package->derivation)
(package-compiler): New procedures.
* tests/inferior.scm ("inferior-package-derivation"): New test.
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* gnu/packages/bioinformatics.scm (r-pore): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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This fix ensures that the H5_HAVE_PARALLEL identifier is correctly set
in the file H5pubconf.h.
* gnu/packages/maths.scm (hdf5-parallel-openmpi)[arguments]: Add
the "--enable-parallel" flag to the list of configure flags. Remove
the incompatible "--enable-cxx" flag. Add 'mpi-setup' phase.
Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
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* gnu/packages/maths.scm (hdf5)[arguments]: Add condition to 'split'
phase to check for existence of h5fc script.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[configure]: Remove
unused "localstatedir" setting.
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* gnu/packages/ftp.scm (libfilezilla): Update to 0.13.2.
[source]: Use HTTPS.
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* gnu/packages/python.scm (python-pyparsing)[home-page]: Update.
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* gnu/packages/emacs.scm (emacs-mu4e-conversation)[description]:
Fix 'correspondant' typo.
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* gnu/packages/kodi.scm (kodi)[arguments]: Substitute INVOKE for SYSTEM*.
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* gnu/packages/kodi.scm (crossguid)[arguments]: Substitute INVOKE for SYSTEM*.
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* gnu/packages/gnuzilla.scm (icecat): Update to 60.2.0-gnu1.
[source]: Download pre-release from alpha.gnu.org. Remove obsolete patches.
Comment out the code to delete the bundled copies of libevent, cairo,
harfbuzz, and graphite2.
[inputs]: Use the latest ffmpeg. Comment out libevent, cairo, harfbuzz, and
graphite2.
[native-inputs]: Add rust and cargo.
[arguments]: Remove --enable-gio and --disable-gnomeui. Add --disable-stylo.
Comment out --with-system-{libevent,harfbuzz,graphite2}, --enable-system-cairo.
Import %cargo-build-system-modules. Add 'patch-cargo-checksums' phase.
* gnu/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch,
gnu/packages/patches/icecat-bug-1413868-pt1.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
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* gnu/packages/patches/libvpx-use-after-free-in-postproc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/video.scm (libvpx)[source]: Add patch.
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* gnu/packages/python-crypto.scm (python-paramiko): Update to 2.4.2.
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* gnu/packages/python-crypto.scm (python-paramiko)[home-page]: Use HTTPS.
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* gnu/packages/python.scm (python-rencode): Update to 1.0.5.
[arguments]: Add a 'delete-bogus-test' phase.
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* gnu/packages/python.scm (python-hdf4)[arguments]: Substitute INVOKE
for SYSTEM*.
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* gnu/packages/skarnet.scm (s6): Update to 2.7.2.1.
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* gnu/packages/xml.scm (perl-xml-compile): Update to 1.60.
[propagated-inputs]: Add perl-carp, perl-scalar-list-utils, and
perl-types-serialiser.
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* gnu/packages/emacs.scm (emacs-orgalist): Update to 1.9.
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* gnu/packages/graphics.scm (openscenegraph): Update to 3.6.3.
[source]: Use GIT-FILE-NAME.
[inputs]: Remove unused pth and qtbase.
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* gnu/packages/graphviz.scm (python-pydot): Update to 1.2.4.
[arguments]: Run the test suite.
[native-inputs]: Add python-chardet.
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* gnu/packages/debian.scm, gnu/packages/syndication.scm: Add comments.
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* gnu/packages/debian.scm (ubuntu-keyring): Update to 2018.09.18.1.
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* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.048.
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* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[fix-mtime-bug]:
Delete.
[reset-timestamps-after-changes]: Modify.
(rust-1.24): Don't delete "fix-mtime-bug" since now it doesn't ever
get created.
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* gnu/packages/rust.scm (rust-1.23)[arguments]<#:phases>
[patch-cargo-tests, ignore-glibc-2.27-incompatible-test,fix-mtime-bug]: Move
to...
(rust-1.20): ... here.
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* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.9.
(%linux-libre-hash): Update hash.
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* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.71.
(%linux-libre-4.14-hash): Update hash.
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* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.128.
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* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.157.
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* gnu/packages/bittorrent.scm (qbittorrent): Update to 4.1.3.
[inputs]: Use python-wrapper instead of python.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/gprolog.scm (gprolog): Update to 1.4.5.
[source]: Add an alternate source URL.
Signed-off-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/bioinformatics.scm (rsem): Update to 1.3.1.
[source]: Fetch from git; remove patch; delete bundled samtools.
[arguments]: Pass make flags; adjust phases.
[inputs]: Remove ncurses and samtools-0.1; add htslib-1.3.
* gnu/packages/patches/rsem-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
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* gnu/packages/haskell.scm (ghc-pandoc-citeproc): Update to 0.14.3.1.
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* gnu/packages/haskell.scm (ghc-xml-conduit): Update to 1.8.0.1.
[inputs]: Add ghc-doctest.
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* gnu/packages/machine-learning.scm (python2-scikit-learn)[arguments]:
Override check phase to disable broken tests and pass environment variables.
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* gnu/packages/cran.scm (r-parmigene): New variable.
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* gnu/packages/emacs.scm (emacs-dired-sidebar): New public variable.
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* gnu/packages/gnome.scm (eolie)[home-page]: Set to wiki.gnome.org/Apps/Eolie.
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* gnu/services/networking.scm (<iptables-configuration>): New record type.
(iptables-service-type): New variable.
* gnu/tests/networking.scm (run-iptables-test): New procedure.
(%test-iptables): New variable.
* doc/guix.texi (Networking Services): Document it.
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* gnu/packages/bootloaders.scm (u-boot)[home-page]: Use HTTPS.
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* gnu/packages/security-token.scm (ccid): Update to 1.4.30.
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* gnu/packages/xiph.scm (opusfile): Update to 0.11.
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* gnu/packages/xdisorg.scm (scrot, unclutter, xautolock, nxbelld)
[arguments]: Use INVOKE.
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* gnu/packages/shells.scm (mksh)[arguments]: Use INVOKE...
(scsh)[arguments]: ...and also return #t from all phases.
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* gnu/packages/maths.scm (ruby-asciimath)[arguments]: Return #t from
all phases.
* gnu/packages/rails.scm (ruby-debug-inspector)[arguments]: Substitute
INVOKE for SYSTEM*.
* gnu/packages/ruby.scm (ruby-permutation, ruby-blankslate)
(ruby-minitest-pretty-diff, ruby-guard, ruby-rb-inotify, ruby-tins)
(ruby-gem-hadar, ruby-term-ansicolor, ruby-json-pure)
(ruby-activesupport, ruby-redcloth, ruby-netrc, ruby-unf-ext, ruby-yard)
(ruby-turn, ruby-sqlite3, ruby-shoulda-context, ruby-shoulda-matchers)
(ruby-shoulda, ruby-httpclient, ruby-ansi, ruby-bio-commandeer)
(ruby-rubytest, ruby-brass, ruby-qed, ruby-ae, ruby-lemon, ruby-hashery)
(ruby-rc4, ruby-concurrent)[arguments]: Likewise.
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* gnu/packages/ruby.scm (ruby-heredoc-unindent)[description]: Fix typo.
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* gnu/packages/telephony.scm (libiax2, mumble)[arguments]: Use INVOKE.
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