| Commit message (Collapse) | Author | Age |
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* gnu/packages/lisp-xyz.scm (cl-clsql)[inputs]: Remove mysql. Add
mariadb:dev.
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* gnu/packages/lisp-xyz.scm (sbcl-clsql)[inputs]: Remove mysql. Add
mariadb:dev, mariadb:lib.
[arguments]: Adjust custom 'build-helper-library phase to build with
and link to mariadb.
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* gnu/packages/mail.scm (opensmtpd-extras)[inputs]: Remove mysql. Add
mariadb:dev.
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* gnu/packages/linux.scm (ulogd)[inputs]: Remove mysql. Add mariadb:dev.
[arguments]: Adjust configure-flags accordingly.
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* gnu/packages/irc.scm (inspircd)[inputs]: Remove mysql. Add mariadb:dev.
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* gnu/packages/haxe.scm (neko)[inputs]: Remove mysql. Add mariadb:dev,
mariadb:lib.
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* gnu/packages/haskell-xyz.scm (ghc-mysql)[inputs]: Remove mysql. Add
mariadb:dev.
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* gnu/packages/benchmark.scm (sysbench)[arguments]: Remove mysql flag.
[inputs]: Remove mysql. Add mariadb:dev.
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* gnu/packages/cran.scm (r-ffbase)[arguments]: Add phase 'r-compatibility.
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* gnu/packages/web.scm (mod-wsgi)[inputs]: Move httpd ...
[native-inputs]: ... to here.
[arguments]: Forbid keeping a reference to httpd.
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* gnu/packages/openldap.scm (389-ds-base)[inputs]: Move httpd ...
[native-inputs]: ... to here.
[arguments]: Forbid keeping a reference to httpd.
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* gnu/packages/haxe.scm (neko): Move httpd ...
[native-inputs]: ... to here.
[arguments]: Forbid keeping a reference to httpd.
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* guix/build-system/cmake.scm (cmake-build, cmake-cross-build):
Add #:disallowed-references.
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Fixes CVE-2023-27522, CVE-2023-25690, CVE-2022-37436, CVE-2022-36760,
CVE-2006-20001, CVE-2022-31813, CVE-2022-30556, CVE-2022-30522,
CVE-2022-29404, CVE-2022-28615, CVE-2022-28614, CVE-2022-28330,
CVE-2022-26377, CVE-2022-23943, CVE-2022-22721, CVE-2022-22720,
and CVE-2022-22719.
* gnu/packages/web.scm (httpd): Update to 2.4.57.
(httpd/pinned): New variable.
* gnu/packages/gnome.scm (libsoup-minimal): Replace httpd with httpd/pinned.
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* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.44.1.
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* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.34.1.
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Support is currently broken and blocks too many other packages.
* gnu/packages/gnome.scm (librsvg-for-system): Only use librsvg on
x86_64-linux.
* gnu/packages/rust.scm (rust-bootstrap)[supported-systems]: Remove
aarch64-linux, riscv64-linux.
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* gnu/packages/statistics.scm (r-norm): Update to 1.0-11.0.
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* gnu/packages/statistics.scm (r-lme4): Update to 1.1-33.
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* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-15.
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* gnu/packages/statistics.scm (r-checkmate): Update to 2.2.0.
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* gnu/packages/statistics.scm (r-xml2): Update to 1.3.4.
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* gnu/packages/statistics.scm (r-dplyr): Update to 1.1.2.
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* gnu/packages/statistics.scm (r-rlang): Update to 1.1.1.
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* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4.10.
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* gnu/packages/statistics.scm (r-mass): Update to 7.3-59.
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* gnu/packages/cran.scm (r-measurements): Update to 1.5.1.
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* gnu/packages/cran.scm (r-vroom): Update to 1.6.3.
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* gnu/packages/cran.scm (r-qtl2): Update to 0.32.
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* gnu/packages/cran.scm (r-qtl): Update to 1.60.
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* gnu/packages/cran.scm (r-yardstick): Update to 1.2.0.
[propagated-inputs]: Add r-cli, r-lifecycle, and r-tibble.
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* gnu/packages/cran.scm (r-spatstat): Update to 3.0-5.
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* gnu/packages/cran.scm (r-spatstat-model): Update to 3.2-3.
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* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.9.
[propagated-inputs]: Add r-dplyr.
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* gnu/packages/cran.scm (r-rcdd): Update to 1.5-2.
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* gnu/packages/cran.scm (r-snowballc): Update to 0.7.1.
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* gnu/packages/cran.scm (r-rgdal): Update to 1.6-6.
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* gnu/packages/cran.scm (r-parameters): Update to 0.21.0.
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* gnu/packages/cran.scm (r-terra): Update to 1.7-29.
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* gnu/packages/cran.scm (r-batchtools): Update to 0.9.17.
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* gnu/packages/cran.scm (r-s2): Update to 1.1.3.
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* gnu/packages/cran.scm (r-units): Update to 0.8-2.
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* gnu/packages/cran.scm (r-epi): Update to 2.47.1.
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* gnu/packages/cran.scm (r-longdat): Update to 1.1.1.
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* gnu/packages/cran.scm (r-rmpfr): Update to 0.9-2.
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* gnu/packages/cran.scm (r-bigrquery): Update to 1.4.2.
[propagated-inputs]: Add r-cli and r-withr.
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* gnu/packages/cran.scm (r-ouch): Update to 2.19.
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* gnu/packages/cran.scm (r-afex): Update to 1.3-0.
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* gnu/packages/cran.scm (r-fs): Update to 1.6.2.
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* gnu/packages/cran.scm (r-tmb): Update to 1.9.4.
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