| Commit message (Expand) | Author | Age |
|---|
| ... | |
| | * | gnu: Add impute.•••* gnu/packages/bioinformatics.scm (r-impute): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add BSgenome.•••* gnu/packages/bioinformatics.scm (r-bsgenome): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add plotly.•••* gnu/packages/statistics.scm (r-plotly): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add viridis.•••* gnu/packages/statistics.scm (r-viridis): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add topGO.•••* gnu/packages/bioinformatics.scm (r-topgo): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add matrixStats.•••* gnu/packages/statistics.scm (r-matrixstats): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add R.rsp.•••* gnu/packages/statistics.scm (r-r-rsp): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add R.cache.•••* gnu/packages/statistics.scm (r-r-cache): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add R.utils.•••* gnu/packages/statistics.scm (r-r-utils): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add R.oo.•••* gnu/packages/statistics.scm (r-r-oo): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add R.methodsS3.•••* gnu/packages/statistics.scm (r-r-methodss3): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add base64enc.•••* gnu/packages/statistics.scm (r-base64enc): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add DT.•••* gnu/packages/statistics.scm (r-dt): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add SparseM.•••* gnu/packages/statistics.scm (r-sparsem): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add GO.db.•••* gnu/packages/bioinformatics.scm (r-go-db): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add GenomicFeatures.•••* gnu/packages/bioinformatics.scm (r-genomicfeatures): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add rtracklayer.•••* gnu/packages/bioinformatics.scm (r-rtracklayer): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add GenomicAlignments.•••* gnu/packages/bioinformatics.scm (r-genomicalignments): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add SummarizedExperiment.•••* gnu/packages/bioinformatics.scm (r-summarizedexperiment): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add Rsamtools.•••* gnu/packages/bioinformatics.scm (r-rsamtools): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add Biostrings.•••* gnu/packages/bioinformatics.scm (r-biostrings): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add BiocParallel.•••* gnu/packages/bioinformatics.scm (r-biocparallel): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add biomaRt.•••* gnu/packages/bioinformatics.scm (r-biomart): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add AnnotationDbi.•••* gnu/packages/bioinformatics.scm (r-annotationdbi): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add Biobase.•••* gnu/packages/bioinformatics.scm (r-biobase): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add snow.•••* gnu/packages/statistics.scm (r-snow): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add futile.logger.•••* gnu/packages/statistics.scm (r-futile-logger): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add futile.options.•••* gnu/packages/statistics.scm (r-futile-options): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add lambda.r.•••* gnu/packages/statistics.scm (r-lambda-r): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add r-xml.•••* gnu/packages/statistics.scm (r-xml): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add RCurl.•••* gnu/packages/statistics.scm (r-rcurl): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add RSQLite.•••* gnu/packages/statistics.scm (r-rsqlite): New variable.
| Ricardo Wurmus | 2016-01-07 |
| | * | import: Rename "cran-fetch" to "fetch-description".•••* guix/import/cran.scm (cran-fetch): Rename procedure ...
(fetch-description): ... to this.
| Ricardo Wurmus | 2016-01-07 |
| | * | import: Add package->upstream-name procedure.•••* guix/import/cran.scm (package->upstream-name): New procedure.
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: Add xmlstarlet.•••* gnu/packages/xml.scm (xmlstarlet): New variable.
| Raimon Grau | 2016-01-07 |
| | * | gnu: zita-convolver: Drop the '-march=native' optimization.•••* gnu/packages/audio.scm (zita-convolver)[source]: Add snippet.
| 宋文武 | 2016-01-07 |
| | * | gnu: zita-resampler: Drop the '-march=native' optimization.•••* gnu/packages/audio.scm (zita-resampler)[source]: Add snippet.
| 宋文武 | 2016-01-07 |
| | * | gnu: Add ruby-ansi.•••* gnu/packages/ruby.scm (ruby-ansi): New variable.
| Ben Woodcroft | 2016-01-07 |
| | * | gnu: edirect: Update to 3.50.•••* gnu/packages/bioinformatics.scm (edirect): Update to 3.50.
[native-inputs]: Remove "unzip".
| Ricardo Wurmus | 2016-01-07 |
| | * | gnu: w3m: Enable SSL, disable broken protocols and ciphers.•••Fixes <http://bugs.gnu.org/16791>.
* gnu/packages/patches/w3m-force-ssl_verify_server-on.patch: New file.
* gnu/packages/patches/w3m-disable-sslv2-and-sslv3.patch: New file.
* gnu/packages/patches/w3m-disable-weak-ciphers.patch: New file.
* gnu/packages/w3m.scm (w3m)[source]: Add patches.
* gnu-system.am (dist_patch_DATA): Add the new files.
| Leo Famulari | 2016-01-07 |
| | * | gnu: w3m: Update patch to use '-p1'.•••* gnu/packages/patches/w3m-fix-compile.patch: Rename this file...
* gnu/packages/patches/w3m-libgc.patch: ...to this, and adjust patch
prefix level to '-p1'.
* gnu-system.am (dist_patch_DATA): Update patch name.
* gnu/packages/w3m.scm (w3m)[source]: Update patch name.
[source]: Drop patch flag -p0.
| Leo Famulari | 2016-01-07 |
| | * | build-system/gnu: Make 'package-with-explicit-inputs' idempotent.•••* guix/build-system/gnu.scm (package-with-explicit-inputs): Use
'ensure-keyword-arguments' instead of appending to ARGS.
* gnu/packages/commencement.scm (static-bash-for-glibc): Add missing
#:guile argument.
| Ludovic Courtès | 2016-01-06 |
| | * | utils: Add 'ensure-keyword-arguments'.•••* guix/utils.scm (delkw, ensure-keyword-arguments): New procedures.
* tests/utils.scm ("ensure-keyword-arguments"): New test.
| Ludovic Courtès | 2016-01-06 |
| | * | http-client: Work around <http://bugs.gnu.org/22273>.•••* guix/http-client.scm (read-header-line): New procedure. Use it.
| Ludovic Courtès | 2016-01-06 |
| | * | gnu: guix: Update development snapshot to f888c0b.•••* gnu/packages/package-management.scm (guix-devel): Update to f888c0b.
| Ludovic Courtès | 2016-01-06 |
| | * | http-client: Fix erroneous comment.•••* guix/http-client.scm: Fix Guile version number in comment for Guile
commit 5a10e41.
| Ludovic Courtès | 2016-01-06 |
| | * | gnu: gmsh: Update to 2.11.0.•••* gnu/packages/maths.scm (gmsh): Update to 2.11.0.
[arguments]: Replace 'check phase.
| Eric Bavier | 2016-01-06 |
| | * | lint: cve: Catch host name lookup errors.•••* guix/scripts/lint.scm (package-vulnerabilities): Catch
'getaddrinfo-error'.
| Ludovic Courtès | 2016-01-06 |
| | * | gnu: sudo: Use /var/run/sudo instead of /run/sudo.•••* gnu/packages/admin.scm (sudo)[arguments]: Pass
--with-rundir=/var/run/sudo since /var/run is cleaned up at boot time on
GuixSD whereas /run is not.
| Ludovic Courtès | 2016-01-06 |
| | * | services: cleanup-service: Catch 'system-error' instead of everything.•••This makes sure that critical errors such as unbound-variable do not go
undetected.
* gnu/services.scm (cleanup-gexp): Introduce local 'fail-safe' macro and
use it. Remove uses of 'false-if-exception'.
| Ludovic Courtès | 2016-01-06 |