aboutsummaryrefslogtreecommitdiff
Commit message (Collapse)AuthorAge
* gnu: r-rhtslib: Update to 1.10.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.10.0.
* gnu: r-rbgl: Update to 1.54.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.54.0.
* gnu: r-annotationforge: Update to 1.20.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.20.0.
* gnu: r-dexseq: Update to 1.24.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.0.
* gnu: r-deseq2: Update to 1.18.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.18.0.
* gnu: r-genefilter: Update to 1.60.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.60.0.
* gnu: r-geneplotter: Update to 1.56.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-geneplotter): Update to 1.56.0.
* gnu: r-annotate: Update to 1.56.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-annotate): Update to 1.56.0.
* gnu: r-dnacopy: Update to 1.52.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/bioinformatics.scm (r-dnacopy): Update to 1.52.0.
* gnu: r-biocviews: Update to 1.46.0.Ricardo Wurmus2017-11-07
| | | | | * gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.46.0. [propagated-inputs]: Remove r-knitr.
* gnu: r-bioccheck: Update to 1.14.0.Ricardo Wurmus2017-11-07
| | | | | | * gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.14.0. [native-inputs]: Remove which. [propagated-inputs]: Add r-stringdist.
* gnu: Add r-stringdist.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/cran.scm (r-stringdist): New variable.
* gnu: r-rgraphviz: Update to 2.22.0.Ricardo Wurmus2017-11-07
| | | | * gnu/packages/graph.scm (r-rgraphviz): Update to 2.22.0.
* guix: Add archive support for bioconductor-uri.Ricardo Wurmus2017-11-07
| | | | | | * guix/build-system/r.scm (bioconductor-uri): Also return the archive URL. * guix/import/cran.scm (latest-bioconductor-release, fetch-description): Adjust because bioconductor-uri now returns a list.
* import: cran: Use Bioconductor 3.6 helpers.Ricardo Wurmus2017-11-07
| | | | | | | * guix/import/cran.scm (bioconductor-mirror-url): Remove procedure. (fetch-description): Extract DESCRIPTION file from tarball for Bioconductor packages. (latest-bioconductor-release): Use latest-bioconductor-package-version.
* import: cran: Add support for Bioconductor 3.6.Ricardo Wurmus2017-11-07
| | | | | | | * guix/import/cran.scm (%bioconductor-version, %bioconductor-packages-list-url): New variables. (bioconductor-packages-list, latest-bioconductor-package-version): New procedures.
* import: utils: Add string helpers.Ricardo Wurmus2017-11-07
| | | | * guix/import/utils.scm (read-lines, chunk-lines): New procedures.
* build: Conditionally build json importer.Eric Bavier2017-11-06
| | | | * Makefile.am (MODULES): Add guix/scripts/import/json.scm when HAVE_GUILE_JSON.
* gnu: guile-git: Update snapshot.Ludovic Courtès2017-11-07
| | | | * gnu/packages/guile.scm (guile-git): Update to commit 951a32c.
* gnu: moka-icon-theme: Fix license.Brendan Tildesley2017-11-07
| | | | | | * gnu/packages/gnome.scm (moka-icon-theme): Add cc-by-sa4.0 to license field. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: moka-icon-theme: Add faba-icon-theme as propagated input.Brendan Tildesley2017-11-07
| | | | | | * gnu/packages/gnome.scm (moka-icon-theme)[propagated-inputs]: New field. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: moka-icon-theme: Simplify package definition.Brendan Tildesley2017-11-07
| | | | | | | * gnu/packages/gnome.scm (moka-icon-theme): Inherit faba-icon-theme to avoid duplicating similar package definition. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add faba-icon-theme.Brendan Tildesley2017-11-07
| | | | | | * gnu/packages/gnome.scm (faba-icon-theme): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: electrum: Update to 3.0.Carlo Zancanaro2017-11-07
| | | | | | | | gnu/packages/finance.scm (electrum): Update to 3.0. [inputs]: Change to python3 inputs. [arguments]: Remove python-2. Disable tests. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add python-jsonrpclib-pelix.Carlo Zancanaro2017-11-07
| | | | | | | * gnu/packages/python.scm (python-jsonrpclib-pelix, python2-jsonrpclib-pelix): New variables. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* refresh: Account for hidden packages.Ludovic Courtès2017-11-07
| | | | | | | | Suggested by Marius Bakke <mbakke@fastmail.com> in <https://bugs.gnu.org/29177>. * guix/scripts/refresh.scm (all-packages): Pass #:select? to 'fold-packages'.
* packages: 'fold-packages' takes #:select? parameter.Ludovic Courtès2017-11-07
| | | | * gnu/packages.scm (fold-packages): Add #:select? parameter and honor it.
* compile: Fix VPATH builds.Ludovic Courtès2017-11-07
| | | | | | | | | | | | Fixes <https://bugs.gnu.org/29091>. Reported by Eric Bavier <bavier@cray.com>. * guix/build/compile.scm (relative-file): New procedure. (load-files): Use it before calling 'file-name->module-name'. (compile-files): Likewise before calling 'scm->go'. * guix/build/pull.scm (build-guix): Remove 'with-directory-excursion' and file name hack from ce33c3af76b0e5c68cc42dddf2b9c4b017386fd8. Pass OUT to 'all-scheme-files'.
* Fix ambiguous imports.Ludovic Courtès2017-11-07
| | | | | * gnu/packages/ocaml.scm: Hide 'zip' from (srfi srfi-1). * guix/git.scm: Select 'mkdir-p' from (guix build utils).
* gnu: nnn: Update to 1.5.Efraim Flashner2017-11-06
| | | | * gnu/packages/admin.scm (nnn): Update to 1.5.
* gnu: libuninameslist: Update to 20170807.Efraim Flashner2017-11-06
| | | | * gnu/packages/fontutils.scm (libuninameslist): Update to 20170807.
* gnu: u-boot: Only install 'MLO' output if it exists.Efraim Flashner2017-11-06
| | | | | * gnu/packages/bootloaders.scm (u-boot)[arguments]: Add 'MLO' to uboot-files only if it has been built.
* system: vm: Use 2^32 - 1 as hash size.Mathieu Othacehe2017-11-06
| | | | | | | | * gnu/system/vm.scm (operating-system-uuid): Use 2^32 - 1 instead of 2^32 as hash size. On some 32 bit system (ARM for example), 2^32 exceeds hash max size (ULONG_MAX = 2^32 - 1).
* bootloaders: uboot: Add .img and MLO files to binary outputs.Mathieu Othacehe2017-11-06
| | | | | * gnu/packages/bootloaders.scm (make-u-boot-package): Add .img and MLO files as binary output.
* linux: Add omap2plus generic kernel.Mathieu Othacehe2017-11-06
| | | | * gnu/packages/linux.scm (linux-libre-arm-omap2plus): New exported variable.
* gnu: uboot: Fix same-arch? check.Mathieu Othacehe2017-11-06
| | | | | | * gnu/packages/bootloaders.scm (make-u-boot-package): Compare %current-system to system associated to given triplet. Comparing a system and a triplet didn't make sense.
* gnu: perl-test-www-mechanize-psgi: Update source uri.Efraim Flashner2017-11-06
| | | | | * gnu/packages/web.scm (perl-test-www-mechanize-psgi)[source]: Update to new source uri.
* gnu: dtc: Build python bindings.Efraim Flashner2017-11-06
| | | | | | | * gnu/packages/bootloaders.scm (dtc)[native-inputs]: Add swig. [inputs]: Add python-2. [arguments]: Remove 'NO_PYTHON' from make-flags, add 'SETUP_PREFIX' to set python bindings prefix.
* gnu: dtc: Update to 1.4.5.Efraim Flashner2017-11-06
| | | | | * gnu/packages/bootloaders.scm (dtc): Update to 1.4.5. [arguments]: Add NO_PYTHON flag to make-flags.
* gnu: libxres: Update to 1.2.0.Efraim Flashner2017-11-06
| | | | * gnu/packages/xorg.scm (libxres): Update to 1.2.0.
* gnu: youtube-dl: Update to 2017.11.06.Tobias Geerinckx-Rice2017-11-06
| | | | * gnu/packages/video.scm (youtube-dl): Update to 2017.11.06.
* gnu: aria2: Update to 1.33.0.Efraim Flashner2017-11-06
| | | | * gnu/packages/bittorrent.scm (aria2): Update to 1.33.0.
* gnu: emacs-undo-tree: Parameterize source uri.Efraim Flashner2017-11-06
| | | | | * gnu/packages/emacs.scm (emacs-undo-tree)[source]: Replace hard-coded version with version parameter.
* gnu: borg: Update to 1.1.2.Leo Famulari2017-11-05
| | | | | * gnu/packages/backup.scm (borg): Update to 1.1.2. [arguments]: Disable another test in the 'check' phase.
* gnu: netsurf: Update to 3.7.Eric Bavier2017-11-05
| | | | | | | | | | For compatibility, dependents must be updated at the same time. * gnu/packages/web.scm (libcss): Update to 0.7.0 (nsgenbind): Update to 0.5. (netsurf): Update to 3.7. [arguments]: Fix binary name in .desktop. Adjust "docs" directory name. * gnu/packages/patches/netsurf-system-utf8proc.patch: Adjust to new source.
* gnu: libnspsl: Update to 0.1.2.Eric Bavier2017-11-05
| | | | * gnu/packages/web.scm (libnspsl): Update to 0.1.2.
* gnu: libnsgif: Update to 0.2.0.Eric Bavier2017-11-05
| | | | * gnu/packages/web.scm (libnsgif): Update to 0.2.0.
* gnu: libsvgtiny: Update to 0.1.6.Eric Bavier2017-11-05
| | | | * gnu/packages/web.scm (libsvgtiny): Update to 0.1.6.
* gnu: libdom: Update to 0.3.2.Eric Bavier2017-11-05
| | | | * gnu/packages/web.scm (libdom): Update to 0.3.2.
* gnu: libwapcaplet: Update to 0.4.0.Eric Bavier2017-11-05
| | | | * gnu/packages/web.scm (libwapcaplet): Update to 0.4.0.
generated by cgit v1.2.3 (git 2.45.0) at 2025-01-07 19:14:41 +0000