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* gnu: ruby-shoulda-matchers: Update to 3.1.1.Ben Woodcroft2016-05-25
| | | | | * gnu/packages/ruby.scm (ruby-shoulda-matchers): Update to 3.1.1. [arguments]: Remove 'fix-import' phase.
* gnu: ruby-domain-name: Update to 0.5.20160310.Ben Woodcroft2016-05-25
| | | | * gnu/packages/ruby.scm (ruby-domain-name): Update to 0.5.20160310.
* gnu: ruby-nokogiri: Update to 1.6.7.2.Ben Woodcroft2016-05-25
| | | | | * gnu/packages/ruby.scm (ruby-nokogiri): Update to 1.6.7.2. [arguments]: Relax 'mini_portile2' dependency.
* guix: ruby-build-system: Extract gemspec during 'extract-gemspec'.Ben Woodcroft2016-05-25
| | | | | | | * guix/build/ruby-build-system.scm (build): Move extraction from here ... (extract-gemspec): ... to here. New variable. (first-gemspec): New variable. (%standard-phases): Add 'extract-gemspec' phase.
* gnu: linux-libre: Update to 4.6.Mark H Weaver2016-05-25
| | | | | | | | | * gnu/packages/linux.scm (linux-libre): Update to 4.6. * gnu/packages/linux-libre-4.6-x86_64.conf, gnu/packages/linux-libre-4.6-i686.conf: New files. * gnu/packages/linux-libre-4.5-x86_64.conf, gnu/packages/linux-libre-4.5-i686.conf: Delete files. * Makefile.am (KCONFIGS): Update accordingly.
* gnu: python-libxml2: Drop replacement from inherited libxml2.Mark H Weaver2016-05-25
| | | | | | | This is a followup to commit 493e9a5a8f613764cfa396c33ee6cb381b0dbbef. * gnu/packages/xml.scm (python-libxml2)[replacement]: Set to #f, overriding inherited value.
* gnu: freeipmi: Update to 1.5.2.Efraim Flashner2016-05-25
| | | | * gnu/packages/freeipmi.scm (freeipmi): Update to 1.5.2.
* gnu: linux-libre-4.1: Update to 4.1.25.Mark H Weaver2016-05-25
| | | | * gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.25.
* gnu: webkitgtk: Update to 2.12.3 [fixes CVE-2016-{1856,1857}].Mark H Weaver2016-05-25
| | | | * gnu/packages/webkit.scm (webkitgtk): Update to 2.12.3.
* graft: Fail when one of the threads raises an exception.Ludovic Courtès2016-05-24
| | | | | | | Fixes <http://bugs.gnu.org/23581>. * guix/build/graft.scm (exit-on-exception): New procedure. (rewrite-directory): Use it to wrap REWRITE-LEAF.
* size: Pass 'requisites' a list of items.Ludovic Courtès2016-05-24
| | | | | | | | * guix/scripts/size.scm (substitutable-requisites): Change 'item' to 'items' and adjust. (requisites*): Likewise. (mappend-map): Remove. (store-profile): Adjust accordingly.
* store: 'requisites' now takes a list of store items.Ludovic Courtès2016-05-24
| | | | | | | | | | | * guix/store.scm (fold-path): Change 'path' to 'paths' and adjust body accordingly. (requisites): Likewise. * guix/scripts/environment.scm (inputs->requisites): Adjust user accordingly. * guix/scripts/size.scm (requisites*): Likewise. * guix/scripts/gc.scm (guix-gc): Likewise. * tests/store.scm ("requisites"): Likewise.
* size: Accept several arguments.Ludovic Courtès2016-05-24
| | | | | | * guix/scripts/size.scm (display-profile): Display WHOLE at then end. (guix-size): Accept several FILES. * doc/guix.texi (Invoking guix size): Add example with several items.
* size: 'store-profile' takes a list of store items.Ludovic Courtès2016-05-24
| | | | | | | * guix/scripts/size.scm (mappend-map): New procedure. (store-profile): Change 'item' to 'items' and adjust code accordingly. (guix-size): Update caller. * tests/size.scm ("store-profile"): Likewise.
* tests: Do not run 'cve' checker in 'tests/guix-lint.sh'.Ludovic Courtès2016-05-24
| | | | | | | Reported by Malcolm, Cook <MEC@stowers.org>. * tests/guix-lint.sh: Pass '-c synopsis,description' in first invocation so we don't run the 'cve' checker.
* gnu: libxml2: Fix CVE-2016-3627 and CVE-2016-3705.Ludovic Courtès2016-05-24
| | | | | | | | * gnu/packages/patches/libxml2-CVE-2016-3627.patch, gnu/packages/patches/libxml2-CVE-2016-3705.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/xml.scm (libxml2)[replacement]: New field. (libxml2/fixed): New variable.
* build: Use "%D%" in Makefile fragments.Mathieu Lirzin2016-05-24
| | | | | | | | * doc/local.mk: Use "%D%" for the directory of the fragment relative to the base 'Makefile.am'. * emacs/local.mk: Likewise. * gnu/local.mk: Likewise. * nix/local.mk: Likewise.
* ui: Let users report translation bugs.Mathieu Lirzin2016-05-24
| | | | | * guix/ui.scm (show-bug-report-information): Add a comment for translators.
* gnu: Add emacs-clojure-mode.humanitiesNerd2016-05-24
| | | | | | * gnu/packages/emacs.scm (emacs-clojure-mode): New variable. Signed-off-by: Alex Kost <alezost@gmail.com>
* gnu: Use 'emacs-minimal' instead of 'emacs-no-x'.Alex Kost2016-05-24
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/code.scm (cflow)[native-inputs]: Use 'emacs-minimal' instead of 'emacs-no-x'. * gnu/packages/databases.scm (recutils): Likewise. * gnu/packages/finance.scm (ledger): Likewise * gnu/packages/idutils.scm (idutils): Likewise. * gnu/packages/mail.scm (mu): Likewise. * gnu/packages/ocaml.scm (proof-general): Likewise. * gnu/packages/package-management.scm (guix-0.10.0): Likewise. * gnu/packages/plotutils.scm (asymptote): Likewise. * gnu/packages/scheme.scm (scmutils): Likewise. * gnu/packages/version-control.scm (vc-dwim): Likewise. * gnu/packages/emacs.scm (geiser): Likewise. (paredit): Likewise. (git-modes): Likewise. (magit): Likewise. (magit-svn): Likewise. (haskell-mode): Likewise. (let-alist): Likewise. (emacs-w3m): Likewise. (emacs-wget): Likewise. (emms): Likewise. (bbdb): Likewise. (emacs-mmm-mode): Likewise. (emacs-pdf-tools): Likewise. (emacs-popup)[native-inputs]: Remove as it is not needed for emacs-build-system. (emacs-rfcview): Likewise. (emacs-ffap-rfc-space): Likewise.
* gnu: Move emacs for building from inputs to native-inputs.Alex Kost2016-05-24
| | | | | | | | | | * gnu/packages/emacs.scm (geiser): Move "emacs" from inputs to native-inputs. (paredit): Likewise. (haskell-mode): Likewise. (emacs-w3m): Likewise. (emacs-wget): Likewise. * gnu/packages/mail.scm (mu): Likewise. * gnu/packages/version-control.scm (vc-dwim): Likewise.
* build-system/emacs: Use 'emacs-minimal' by default.Alex Kost2016-05-24
| | | | | * guix/build-system/emacs.scm (default-emacs): Use 'emacs-minimal'. * gnu/packages/emacs.scm (emacs-auctex): Use 'emacs'.
* gnu: Add emacs-minimal.Alex Kost2016-05-24
| | | | * gnu/packages/emacs.scm (emacs-minimal): New variable.
* gnu: emacs: Remove *.elc and autoloads from the tarball.Alex Kost2016-05-24
| | | | | * gnu/packages/emacs.scm (emacs)[source]: Add 'snippet' to remove compiled and generated elisp files.
* gnu: enblend-enfuse: Update to 4.2.Efraim Flashner2016-05-24
| | | | | * gnu/packages/photo.scm (enblend-enfuse): Update to 4.2. [native-inputs]: Add help2man, texlive-minimal.
* gnu: grub: Re-enable test.Leo Famulari2016-05-23
| | | | * gnu/packages/grub.scm (grub)[arguments]: Re-enable test.
* graph: Add 'node-reachable-count'.Ludovic Courtès2016-05-24
| | | | | * guix/graph.scm (node-reachable-count): New procedure. * tests/graph.scm ("node-reachable-count"): New test.
* graph: Expose 'traverse/depth-first'.Ludovic Courtès2016-05-24
| | | | | | * guix/graph.scm (traverse/depth-first): New procedure, based on code formerly in 'node-transitive-edges'. (node-transitive-edges): Rewrite in terms of it.
* refresh: Make 'list-dependents' a monadic procedure.Ludovic Courtès2016-05-24
| | | | | | * guix/scripts/refresh.scm (list-dependents): Remove use of 'with-store' and 'run-with-store'. (guix-refresh): Wrap body in with-store/run-with-store.
* gnu: vdirsyncer: Update to 0.11.0.Leo Famulari2016-05-23
| | | | * gnu/packages/dav.scm (vdirsyncer): Update to 0.11.0.
* gnu: git: Update to 2.8.3.Leo Famulari2016-05-23
| | | | | * gnu/packages/version-control.scm (git): Update to 2.8.3. (git-manpages)[source]: Update hash.
* gnu: Add r-zoo.Roel Janssen2016-05-23
| | | | | | * gnu/packages/statistics.scm (r-zoo): New variable. Signed-off-by: Leo Famulari <leo@famulari.name>
* gnu: borg: Update to 1.0.3.Leo Famulari2016-05-23
| | | | | * gnu/packages/backup.scm (borg): Update to 1.0.3. [source]: Remove pypi-uri.
* union: Compare inode numbers in 'file=?'.Ludovic Courtès2016-05-23
| | | | * guix/build/union.scm (file=?): Compare the inode of ST1 and ST2.
* cve: Remove now unnecessary HTTP caching.Ludovic Courtès2016-05-23
| | | | | * guix/cve.scm (call-with-cve-port): Use 'http-fetch' instead of 'http-fetch/cached'.
* cve: Keep a summarized sexp in cache instead of the full XML.Ludovic Courtès2016-05-23
| | | | | | | | This avoids ~20s of XML parsing when running 'guix lint -c cve'. * guix/cve.scm (vulnerability->sexp, sexp->vulnerability) (fetch-vulnerabilities): New procedures. (current-vulnerabilities): Use 'fetch-vulnerabilities'.
* gnu: Add poppler-qt5.Roel Janssen2016-05-23
| | | | | | * gnu/packages/pdf.scm (poppler-qt5): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: Add slurm-drmaa.Ricardo Wurmus2016-05-23
| | | | * gnu/packages/parallel.scm (slurm-drmaa): New variable.
* gnu: Add ParDRe.Ricardo Wurmus2016-05-23
| | | | * gnu/packages/bioinformatics.scm (pardre): New variable.
* gnu: gnu-pw-mgr: Update to 2.0.Efraim Flashner2016-05-22
| | | | * gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 2.0.
* gnu: imagemagick: Update to 6.9.4-4.Leo Famulari2016-05-22
| | | | * gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.4-4.
* gnu: Add python2-rope.Lukas Gradl2016-05-22
| | | | * gnu/packages/python.scm (python2-rope): New variable.
* gnu: Add gnome-calendar.Kei Yamashita2016-05-21
| | | | | | * gnu/packages/gnome.scm (gnome-calendar): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add envstore.Matthew Jordan2016-05-21
| | | | | | * gnu/package/shellutils.scm: New file. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add sicp.Jan Nieuwenhuizen2016-05-21
| | | | | | * gnu/packages/scheme.scm (sicp): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add dia.Roel Janssen2016-05-21
| | | | | | * gnu/packages/gnome.scm (dia): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* build: Fix 'AM_V_at' typo.Mathieu Lirzin2016-05-21
| | | | * Makefile.am (hydra-jobs.scm): Fix 'AM_V_at' typo.
* grafts: Rename files whose name matches a graft.Ludovic Courtès2016-05-21
| | | | | | | | | Fixes <http://bugs.gnu.org/23132>. Reported by Mark H Weaver <mhw@netris.org>. * guix/build/graft.scm (rename-matching-files): New procedure. (rewrite-directory): Use it. * tests/grafts.scm ("graft-derivation, renaming"): New test.
* grafts: Preserve empty directories when grafting.Ludovic Courtès2016-05-21
| | | | | | * guix/build/graft.scm (rewrite-directory)[rewrite-leaf]: Add case for 'directory. Pass #:directories? #t to 'find-files'.
* substitute: Gracefully handle invalid store file names.Ludovic Courtès2016-05-21
| | | | | | | | | | | Before, something like: echo have /gnu/foo | ./test-env guix substitute --query would lead to an ugly backtrace. * guix/scripts/substitute.scm (narinfo-cache-file): Call 'leave' when 'store-hash-part' returns #f.
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