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* gnu: r-ggbio: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-ggbio): Move from here... * gnu/packages/bioconductor.scm (r-ggbio): ...to here.
* gnu: r-gqtlstats: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-gqtlstats): Move from here... * gnu/packages/bioconductor.scm (r-gqtlstats): ...to here.
* gnu: r-snpstats: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-snpstats): Move from here... * gnu/packages/bioconductor.scm (r-snpstats): ...to here.
* gnu: r-homo-sapiens: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | | * gnu/packages/bioinformatics.scm (r-homo-sapiens): Move from here... * gnu/packages/bioconductor.scm (r-homo-sapiens): ...to here. Replace 'string-append' by 'bioconductor-uri' with 'annotation'.
* gnu: r-erma: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-erma): Move from here... * gnu/packages/bioconductor.scm (r-erma): ...to here.
* gnu: r-ldblock: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-ldblock): Move from here... * gnu/packages/bioconductor.scm (r-ldblock): ...to here.
* gnu: r-gqtlstats: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-gqtlstats): Move from here... * gnu/packages/bioconductor.scm (r-gqtlstats): ...to here.
* gnu: r-gviz: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-gviz): Move from here... * gnu/packages/bioconductor.scm (r-gviz): ...to here.
* gnu: r-gwascat: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-gwascat): Move from here... * gnu/packages/bioconductor.scm (r-gwascat): ...to here.
* gnu: r-sushi: Move to (gnu packages bioconductor).zimoun2020-12-29
| | | | | * gnu/packages/bioinformatics.scm (r-sushi): Move from here... * gnu/packages/bioconductor.scm (r-sushi): ...to here.
* gnu: uBlock Origin: Update to 1.32.4.Marius Bakke2020-12-29
| | | | | * gnu/packages/browser-extensions.scm (uassets): Update to 8e79f25fc. (ublock-origin): Update to 1.32.4.
* gnu: Add r-mlr3.Wiktor Żelazny2020-12-29
| | | | | | * gnu/packages/cran.scm (r-mlr3): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-paradox.Wiktor Żelazny2020-12-29
| | | | | | * gnu/packages/cran.scm (r-paradox): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-mlr3misc.Wiktor Żelazny2020-12-29
| | | | | | * gnu/packages/cran.scm (r-mlr3misc): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-mlr3measures.Wiktor Żelazny2020-12-29
| | | | | | * gnu/packages/cran.scm (r-mlr3measures): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: Add r-lgr.Wiktor Żelazny2020-12-29
| | | | | | * gnu/packages/cran.scm (r-lgr): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: node: Fix npx shebang.Ricardo Wurmus2020-12-29
| | | | | * gnu/packages/node.scm (node)[arguments]: Add build phase "patch-node-shebang".
* gnu: Add js-context-menu.Ricardo Wurmus2020-12-29
| | | | * gnu/packages/javascript.scm (js-context-menu): New variable.
* gnu: gnome-maps: Patch DBUS service.Leo Prikler2020-12-29
| | | | | * gnu/packages/geo.scm (gnome-maps): [arguments]<#:phases>: Add patch-dbus-service.
* gnu: python-cloudscraper: Drop interpreters at build time.Leo Prikler2020-12-29
| | | | | | * gnu/packages/python-web.scm (python-cloudscraper)[snippet]: Keep interpreters. [arguments]<#:phases>: Add drop-unsupported-sources.
* gnu: Add shakespeare-spl.Leo Prikler2020-12-29
| | | | | | * gnu/packages/patches/shakespeare-spl-fix-grammar.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it here. * gnu/packages/esolangs.scm (shakespeare-spl): New variable.
* gnu: u-boot-rockpro64-rk3399: Fix freeze on boot.Caliph Nomble2020-12-29
| | | | | | | | * gnu/packages/bootloaders.scm (u-boot-rockpro64-rk3399)[arguments]<#:phases> [patch-rockpro64-config]: Build with modified config to prevent freeze on boot due to usb being enabled. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* Revert "gnu: u-boot: Fix freeze on boot with u-boot-rockpro64-rk3399."Danny Milosavljevic2020-12-29
| | | | | | because it was applied to the wrong u-boot. This reverts commit d980e6e275aed80e65ad3b7e17c5a5118661e2c2.
* gnu: rust: Remove "i686-linux" from supported systems.Mathieu Othacehe2020-12-29
| | | | * gnu/packages/rust.scm (rust-1.19): Only support "x86_64-linux" architecture.
* gnu: snap: Update to 6.5.0.Nicolas Goaziou2020-12-29
| | | | * gnu/packages/education.scm (snap): Update to 6.5.0.
* gnu: frescobaldi: Update to 3.1.3.Nicolas Goaziou2020-12-29
| | | | * gnu/packages/music.scm (frescobaldi): Update to 3.1.3.
* gnu: jasper: Update to 2.0.23.Vincent Legoll2020-12-29
| | | | | | | | Fixes CVE-2020-27828. * gnu/packages/image.scm (jasper): Update to 2.0.23. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: redis: Unbundle jemalloc & reinstate most of the testsVincent Legoll2020-12-29
| | | | | | | | * gnu/packages/databases.scm (redis)[source]: Delete bundled jemalloc. [native-inputs]: Add procps & tcl for the tests. [arguments]: substitute the right tclsh binary & disable failing tests. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: redis: Update to 6.0.9.Vincent Legoll2020-12-29
| | | | | | * gnu/packages/databases.scm (redis): Update to 6.0.9. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: v4l-utils: Update to 1.20.0.Vincent Legoll2020-12-29
| | | | | | * gnu/packages/video.scm (v4l-utils): Update to 1.20.0. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
* gnu: libmicrohttpd: Update to 0.9.72.Efraim Flashner2020-12-29
| | | | * gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.72.
* gnu: borg: Update to 1.1.15.Leo Famulari2020-12-29
| | | | | | * gnu/packages/backup.scm (borg): Update to 1.1.15. [source]: Update list of Cython-generated files to delete. [arguments]: Skip another test.
* gnu: Remove linux-libre 5.9.Leo Famulari2020-12-29
| | | | | | | | The 5.9 kernel series is no longer supported upstream. * gnu/packages/linux.scm (linux-libre-5.9-version, deblob-scripts-5.9, linux-libre-5.9-pristine-source, linux-libre-5.9-source, linux-libre-headers-5.9, linux-libre-5.9): Remove variables.
* gnu: linux-libre: Update to 5.10.3.Leo Famulari2020-12-29
| | | | | * gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.3. (linux-libre-5.10-pristine-source): Update hash.
* gnu: Add emacs-eldev.Maxim Cournoyer2020-12-28
| | | | * gnu/packages/emacs-xyz.scm (emacs-eldev): New variable.
* gnu: monolith: Update to 2.4.0.Nicolas Goaziou2020-12-29
| | | | | | * gnu/packages/web.scm (monolith): Update to 2.4.0. [arguments]: Add rust-regex Cargo input. Move rust-reqwest from development to regular Cargo inputs.
* gnu: rust-sha2-0.9: Update to 0.9.2.Nicolas Goaziou2020-12-29
| | | | | * gnu/packages/crates-io.scm (rust-sha2-0.9): Update to 0.9.2. [arguments]: Update rust-cfg-if Cargo input.
* gnu: rust-libc-0.2: Update to 0.2.81.Nicolas Goaziou2020-12-29
| | | | * gnu/packages/crates-io.scm (rust-libc-0.2): Update to 0.2.81.
* gnu: rust-reqwest-0.10: Update to 0.10.10.Nicolas Goaziou2020-12-28
| | | | | | | | | | * gnu/packages/crates-io.scm (rust-reqwest-0.10): Update to 0.10.10. [arguments]: Update rust-base64, rust-pin-project-lite, rust-serde-urlencoded, rust-tokio-socks and rust-webpki-roots Cargo inputs. Add rust-rustls-native-certs Cargo input. Add rust-wasm-bindgen-test Cargo development input. [native-inputs]: Add pkg-config. [inputs]: Add openssl.
* gnu: Add rust-tokio-socks-0.3.Nicolas Goaziou2020-12-28
| | | | | * gnu/packages/crates-io.scm (rust-tokio-socks-0.3): New variable. (rust-tokio-socks-0.2): Inherit from above.
* gnu: rust-trust-dns-openssl-0.19: Fix build.Nicolas Goaziou2020-12-28
| | | | | | * gnu/packages/crates-io.scm (rust-trust-dns-openssl-0.19)[native-inputs]: Add pkg-config. [inputs]: Add openssl.
* gnu: rust-futures-0.3: Update to 0.3.8.Nicolas Goaziou2020-12-28
| | | | * gnu/packages/crates-io.scm (rust-futures-0.3): Update to 0.3.8.
* gnu: rust-futures-executor-0.3: Update to 0.3.8.Nicolas Goaziou2020-12-28
| | | | * gnu/packages/crates-io.scm (rust-futures-executor-0.3): Update to 0.3.8.
* gnu: rust-futures-util-0.3: Update to 0.3.8.Nicolas Goaziou2020-12-28
| | | | | * gnu/packages/crates-io.scm (rust-futures-util-0.3): Update to 0.3.8. [arguments]: Add rust-pin-project-1 to Cargo inputs. Disable tests.
* gnu: Add rust-pin-project-1.Nicolas Goaziou2020-12-28
| | | | | * gnu/packages/crates-io.scm (rust-pin-project-1): New variable. (rust-pin-project-0.4): Inherit from above.
* gnu: Add rust-pin-project-internal-1.Nicolas Goaziou2020-12-28
| | | | | * gnu/packages/crates-io.scm (rust-pin-project-internal-1): New variable. (rust-pin-project-internal-0.4): Inherit from above.
* gnu: Add rust-pin-project-auxiliary-macro-0.0.Nicolas Goaziou2020-12-28
| | | | * gnu/packages/crates-io.scm (rust-pin-project-auxiliary-macro-0.0): New variable.
* gnu: rust-futures-macro-0.3: Update to 0.3.8.Nicolas Goaziou2020-12-28
| | | | * gnu/packages/crates-io.scm (rust-futures-macro-0.3): Update to 0.3.8.
* gnu: rust-futures-io-0.3: Update to 0.3.8.Nicolas Goaziou2020-12-28
| | | | * gnu/packages/crates-io.scm (rust-futures-io-0.3): Update to 0.3.8.
* gnu: rust-futures-task-0.3: Update to 0.3.8.Nicolas Goaziou2020-12-28
| | | | | * gnu/packages/crates-io.scm (rust-futures-task-0.3): Update to 0.3.8. [arguments]: Add rust-once-cell as Cargo input.