| Commit message (Collapse) | Author | Age |
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* gnu/packages/bioinformatics.scm (r-ggbio): Move from here...
* gnu/packages/bioconductor.scm (r-ggbio): ...to here.
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* gnu/packages/bioinformatics.scm (r-gqtlstats): Move from here...
* gnu/packages/bioconductor.scm (r-gqtlstats): ...to here.
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* gnu/packages/bioinformatics.scm (r-snpstats): Move from here...
* gnu/packages/bioconductor.scm (r-snpstats): ...to here.
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* gnu/packages/bioinformatics.scm (r-homo-sapiens): Move from here...
* gnu/packages/bioconductor.scm (r-homo-sapiens): ...to here.
Replace 'string-append' by 'bioconductor-uri' with 'annotation'.
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* gnu/packages/bioinformatics.scm (r-erma): Move from here...
* gnu/packages/bioconductor.scm (r-erma): ...to here.
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* gnu/packages/bioinformatics.scm (r-ldblock): Move from here...
* gnu/packages/bioconductor.scm (r-ldblock): ...to here.
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* gnu/packages/bioinformatics.scm (r-gqtlstats): Move from here...
* gnu/packages/bioconductor.scm (r-gqtlstats): ...to here.
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* gnu/packages/bioinformatics.scm (r-gviz): Move from here...
* gnu/packages/bioconductor.scm (r-gviz): ...to here.
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* gnu/packages/bioinformatics.scm (r-gwascat): Move from here...
* gnu/packages/bioconductor.scm (r-gwascat): ...to here.
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* gnu/packages/bioinformatics.scm (r-sushi): Move from here...
* gnu/packages/bioconductor.scm (r-sushi): ...to here.
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* gnu/packages/browser-extensions.scm (uassets): Update to 8e79f25fc.
(ublock-origin): Update to 1.32.4.
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* gnu/packages/cran.scm (r-mlr3): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/cran.scm (r-paradox): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/cran.scm (r-mlr3misc): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/cran.scm (r-mlr3measures): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/cran.scm (r-lgr): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/node.scm (node)[arguments]: Add build phase
"patch-node-shebang".
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* gnu/packages/javascript.scm (js-context-menu): New variable.
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* gnu/packages/geo.scm (gnome-maps):
[arguments]<#:phases>: Add patch-dbus-service.
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* gnu/packages/python-web.scm (python-cloudscraper)[snippet]: Keep
interpreters.
[arguments]<#:phases>: Add drop-unsupported-sources.
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* gnu/packages/patches/shakespeare-spl-fix-grammar.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it here.
* gnu/packages/esolangs.scm (shakespeare-spl): New variable.
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* gnu/packages/bootloaders.scm (u-boot-rockpro64-rk3399)[arguments]<#:phases>
[patch-rockpro64-config]: Build with modified config to prevent freeze on boot
due to usb being enabled.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
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because it was applied to the wrong u-boot.
This reverts commit d980e6e275aed80e65ad3b7e17c5a5118661e2c2.
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* gnu/packages/rust.scm (rust-1.19): Only support "x86_64-linux" architecture.
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* gnu/packages/education.scm (snap): Update to 6.5.0.
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* gnu/packages/music.scm (frescobaldi): Update to 3.1.3.
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Fixes CVE-2020-27828.
* gnu/packages/image.scm (jasper): Update to 2.0.23.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/databases.scm (redis)[source]: Delete bundled jemalloc.
[native-inputs]: Add procps & tcl for the tests. [arguments]: substitute
the right tclsh binary & disable failing tests.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/databases.scm (redis): Update to 6.0.9.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/video.scm (v4l-utils): Update to 1.20.0.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.72.
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* gnu/packages/backup.scm (borg): Update to 1.1.15.
[source]: Update list of Cython-generated files to delete.
[arguments]: Skip another test.
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The 5.9 kernel series is no longer supported upstream.
* gnu/packages/linux.scm (linux-libre-5.9-version, deblob-scripts-5.9,
linux-libre-5.9-pristine-source, linux-libre-5.9-source,
linux-libre-headers-5.9, linux-libre-5.9): Remove variables.
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* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.3.
(linux-libre-5.10-pristine-source): Update hash.
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* gnu/packages/emacs-xyz.scm (emacs-eldev): New variable.
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* gnu/packages/web.scm (monolith): Update to 2.4.0.
[arguments]: Add rust-regex Cargo input. Move rust-reqwest from development
to regular Cargo inputs.
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* gnu/packages/crates-io.scm (rust-sha2-0.9): Update to 0.9.2.
[arguments]: Update rust-cfg-if Cargo input.
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* gnu/packages/crates-io.scm (rust-libc-0.2): Update to 0.2.81.
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* gnu/packages/crates-io.scm (rust-reqwest-0.10): Update to 0.10.10.
[arguments]: Update rust-base64, rust-pin-project-lite, rust-serde-urlencoded,
rust-tokio-socks and rust-webpki-roots Cargo inputs. Add
rust-rustls-native-certs Cargo input. Add rust-wasm-bindgen-test Cargo
development input.
[native-inputs]: Add pkg-config.
[inputs]: Add openssl.
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* gnu/packages/crates-io.scm (rust-tokio-socks-0.3): New variable.
(rust-tokio-socks-0.2): Inherit from above.
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* gnu/packages/crates-io.scm (rust-trust-dns-openssl-0.19)[native-inputs]: Add
pkg-config.
[inputs]: Add openssl.
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* gnu/packages/crates-io.scm (rust-futures-0.3): Update to 0.3.8.
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* gnu/packages/crates-io.scm (rust-futures-executor-0.3): Update to 0.3.8.
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* gnu/packages/crates-io.scm (rust-futures-util-0.3): Update to 0.3.8.
[arguments]: Add rust-pin-project-1 to Cargo inputs. Disable tests.
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* gnu/packages/crates-io.scm (rust-pin-project-1): New variable.
(rust-pin-project-0.4): Inherit from above.
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* gnu/packages/crates-io.scm (rust-pin-project-internal-1): New variable.
(rust-pin-project-internal-0.4): Inherit from above.
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* gnu/packages/crates-io.scm (rust-pin-project-auxiliary-macro-0.0): New variable.
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* gnu/packages/crates-io.scm (rust-futures-macro-0.3): Update to 0.3.8.
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* gnu/packages/crates-io.scm (rust-futures-io-0.3): Update to 0.3.8.
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* gnu/packages/crates-io.scm (rust-futures-task-0.3): Update to 0.3.8.
[arguments]: Add rust-once-cell as Cargo input.
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