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* gnu: sbcl-stumpwm: Drop ECL lisp support and rename to 'stumpwm'.Pierre Langlois2018-12-05
| | | | | | | | | | | | | | | | | | | StumpWM version 1.0.0 was the last version to support lisps other than SBCL. This patch renames the current version of Stumpwm to simply 'stumpwm' instead of 'sbcl-stumpwm' since it's redundant, and removes the unmaintained 'ecl-stumpwm' package. * gnu/packages/lisp.scm (sbcl-stumpwm): Deprecate in favor of 'stumpwm'. [name]: Rename to 'stumpwm'. [arguments]: Set '#:asd-system-name' to 'stumpwm'. [properties]: Replace ecl-variant with cl-source-variant. (ecl-stumpwm): Remove variable. (cl-stumpwm): Replace 'sbcl-stumpwm' with 'stumpwm' and adapt. (sbcl-stumpwm+slynk): Deprecate in favor of 'stumpwm+slynk'. [name]: Rename to 'stumpwm-with-slynk'. [inherit, inputs, arguments]: Replace 'sbcl-stumpwm' with 'stumpwm'. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
* gnu: go-github-com-client-golang-prometheus: Update to 0.9.1-0.7e9098b.Leo Famulari2018-12-04
| | | | | | * gnu/packages/syncthing.scm (go-github-com-client-golang-prometheus): Update to 0.9.1-0.7e9098b. [arguments]: Skip the test suite.
* gnu: go-github-com-syncthing-notify: Update to 0.0.0-3.116c45b.Leo Famulari2018-12-04
| | | | * gnu/packages/syncthing (go-github-com-syncthing-notify): Update to 0.0.0-3.116c45b.
* gnu: Syncthing: Update to 0.14.53.Leo Famulari2018-12-04
| | | | | | | * gnu/packages/syncthing.scm (syncthing): Update to 0.14.53. [source]: Use bundled libraries. [inputs]: Remove field. [arguments]: Simplify the 'build' phase.
* gnu: Add python-xmltodict.Oleg Pykhalov2018-12-05
| | | | * gnu/packages/xml.scm (python-xmltodict): New variable.
* gnu: sbcl-next: Update to 1.1.0.Pierre Neidhardt2018-12-05
| | | | * gnu/packages/web-browsers.scm (sbcl-next): Update to 1.1.0.
* gnu: next-gtk-webkit: Update to 1.1.0.Pierre Neidhardt2018-12-05
| | | | * gnu/packages/web-browsers.scm (next-gtk-webkit): Update to 1.1.0.
* gnu: mongo-tools: Fix build.Christopher Baines2018-12-04
| | | | | | | I guess this broke when upgrading go. I did try upgrading to the later patch and minor releases, but they had similar problems, so lets upgrade separately. * gnu/packages/databases.scm (mongo-tools)[arguments]: Add patch-source phase.
* gnu: mbedtls-apache: Update to 2.14.1 [fixes CVE-2018-19608].Marius Bakke2018-12-04
| | | | * gnu/packages/tls.scm (mbedtls-apache): Update to 2.14.1.
* gnu: samba.scm: Sort module imports.Marius Bakke2018-12-04
| | | | * gnu/packages/samba.scm (gnu): Sort imports.
* gnu: ldb: Update to 1.4.3.Marius Bakke2018-12-04
| | | | | * gnu/packages/samba.scm (ldb): Update to 1.4.3. [inputs]: Add LMDB.
* gnu: samba: Update to 4.9.3.Marius Bakke2018-12-04
| | | | | * gnu/packages/samba.scm (samba): Update to 4.9.3. [inputs]: Add GPGME, JANSSON, LIBARCHIVE and LMDB.
* gnu: re2: Update to 2018-12-01.Marius Bakke2018-12-04
| | | | * gnu/packages/regex.scm (re2): Update to 2018-12-01.
* gnu: re2: Download sources from git.Marius Bakke2018-12-04
| | | | * gnu/packages/regex.scm (re2)[source]: Change to GIT-FETCH.
* gnu: python-django: Update to 1.11.17.Marius Bakke2018-12-04
| | | | * gnu/packages/django.scm (python-django): Update to 1.11.17.
* gnu: go-gopkg.in-tomb.v2: Fix build.Christopher Baines2018-12-04
| | | | | | | | Looks like this test isn't compiling with newer versions of go, so fix it to get the package building again. * gnu/packages/golang.scm (go-gopkg.in-tomb.v2)[arguments]: Add new patch-source phase.
* gnu: Add apertium.Arun Isaac2018-12-04
| | | | * gnu/packages/dictionaries.scm (apertium): New variable.
* gnu: Add lttoolbox.Arun Isaac2018-12-04
| | | | * gnu/packages/dictionaries.scm (lttoolbox): New variable.
* gnu: dictionaries: Use license prefix.Arun Isaac2018-12-04
| | | | | * gnu/packages/dictionaries.scm: Import (guix licenses) with license: prefix. Fix all license fields.
* gnu: pigx-rnaseq: Update to 0.0.5.Ricardo Wurmus2018-12-04
| | | | | * gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.5. [inputs]: Replace snakemake-4 with snakemake.
* gnu: pari-gp: Update to 2.11.1.Andreas Enge2018-12-04
| | | | * gnu/packages/algebra.scm (pari-gp): Update to 2.11.1.
* gnu: emacs-irony-mode: Fetch source using git.Tim Gesthuizen2018-12-04
| | | | | | * gnu/packages/emacs.scm (emacs-irony-mode)[source]: Rewrite in terms of GIT-FETCH. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: enlightenment: Use absolute path to 'edje_cc'.Timo Eisenmann2018-12-04
| | | | | | | * gnu/packages/enlightenment.scm (enlightenment)[arguments]: In 'set-system-actions', set absolute file name to 'edje_cc'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: fenics: Skip extra demo in 'check' phase.Paul Garlick2018-12-04
| | | | | | | * gnu/packages/simulation.scm (fenics)[arguments]: Add 'curl-curl' demo to list of demos that require meshes supplied by git-lfs. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: petsc-openmpi: Configure with support for HYPRE preconditioner.Paul Garlick2018-12-04
| | | | | | | * gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add hypre-openmpi. [arguments]: Add 'with-hypre=1' flag. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* grafts: Mark as non substitutable.Ludovic Courtès2018-12-04
| | | | | * guix/grafts.scm (graft-derivation/shallow): Pass #:substitutable? to 'build-expression->derivation'.
* refresh: '--list-dependents' ignores deprecated packages.Ludovic Courtès2018-12-04
| | | | * guix/scripts/refresh.scm (all-packages): Filter out deprecated packages.
* build: Default to https://ci.guix.info for substitutes.Ludovic Courtès2018-12-04
| | | | | | | | | * config-daemon.ac (guix_substitute_urls): Always default to "https://ci.guix.info". * doc/guix.texi (SUBSTITUTE-SERVER): Switch to ci.guix.info. * guix/scripts/build.scm (%default-log-urls): Likewise. * guix/scripts/substitute.scm (%default-substitute-urls): Likewise. * guix/store.scm (%default-substitute-urls): Likewise.
* Remove most references to hydra.gnu.org.Ludovic Courtès2018-12-04
| | | | | | | | | | | | | | | * Makefile.am (assert-binaries-available): Don't mention hydra.gnu.org in comment. * build-aux/check-available-binaries.scm: Likewise. * build-aux/check-final-inputs-self-contained.scm: Likewise. * doc/guix.texi (SUBSTITUTE-SERVER): New variable. Use it throughout instead of "mirror.hydra.gnu.org". * doc/contributing.texi (Submitting Patches): Likewise. * gnu/services/base.scm (hydra-key-authorization) (guix-activation): Remove mentions of "hydra.gnu.org" in comments and messages. * gnu/system/install.scm (%installation-services): Likewise. * guix/scripts/size.scm (guix-size): Likewise.
* etc: Add "ci.guix.info.pub" public key file.Ludovic Courtès2018-12-04
| | | | | | | * etc/substitutes/ci.guix.info.pub: New file. * Makefile.am (dist_pkgdata_DATA): Add it. * guix/self.scm (miscellaneous-files): Add "share/guix/ci.guix.info.pub".
* gnu: dolphin-emu: Update to commit 2c57e70.Rutger Helling2018-12-04
| | | | * gnu/packages/emulators.scm (dolphin-emu): Update to commit 2c57e70.
* services: ddclient: Fix unrecognized keywords.Oleg Pykhalov2018-12-04
| | | | | | This patch fixes warnings about unrecognized keywords in logs. * gnu/services/dns.scm (serialize-field): Skip some field names.
* gnu: Beets: Update to 1.4.7.Leo Famulari2018-12-03
| | | | * gnu/packages/music.scm (beets): Update to 1.4.7.
* gnu: python-unidecode: Update to 1.0.23.Leo Famulari2018-12-03
| | | | | * gnu/packages/python.scm (python-unidecode, python2-unidecode): Update to 1.0.23.
* gnu: Beets: Fix compatibility with Python 3.7.Leo Famulari2018-12-03
| | | | | | * gnu/packages/patches/beets-python-3.7-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/music.scm (beets)[source]: Use it.
* gnu: Add hnsd.Ludovic Courtès2018-12-03
| | | | | | Thank you, Handshake! * gnu/packages/dns.scm (hnsd): New variable.
* nls: Update 'fr' translation.Julien Lepiller2018-12-03
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* gnu: python-cryptography: Update to 2.4.2.Marius Bakke2018-12-03
| | | | | * gnu/packages/python-crypto.scm (python-cryptography-vectors, python-cryptography): Update to 2.4.2.
* gnu: python-statsmodels: Update to 0.9.0.Marius Bakke2018-12-03
| | | | | * gnu/packages/statistics.scm (python-statsmodels): Update to 0.9.0. [arguments]: Remove obsolete workaround.
* gnu: python-scikit-learn: Update source hash.Marius Bakke2018-12-03
| | | | | | | | The upstream git tag moved from 6ccb5e44b188059e9b7459ac02ec97e32a9ab7ba to 55bf5d93e5674f13a1134d93a11fd0cd11aabcd1 two days later... * gnu/packages/machine-learning.scm (python-scikit-learn)[source](sha256): Update for upstream tag change.
* gnu: python-scikit-image: Propagate six and numpy.Marius Bakke2018-12-03
| | | | | | * gnu/packages/python.scm (python-scikit-image)[native-inputs]: Move PYTHON-NUMPY and PYTHON-SIX ... [propagated-inputs]: ... here.
* gnu: python-scikit-image: Update to 0.14.1.Marius Bakke2018-12-03
| | | | | | | | | | | Also add explicit Python2 variants for its dependency closure. * gnu/packages/python.scm (python-scikit-image): Update to 0.14.1. [source](uri): Use PYPI-URI. [propagated-inputs]: Add PYTHON-CLOUDPICKLE, PYTHON-DASK, PYTHON-MATPLOTLIB and PYTHON-PYWAVELETS. (python2-toolz, python2-cloudpickle, python2-locket, python2-blosc, python2-partd, python2-dask): New public variables.
* gnu: python-dask: Update to 1.0.0.Marius Bakke2018-12-03
| | | | | * gnu/packages/python.scm (python-dask): Update to 1.0.0. [arguments]: Disable one test for Python2, and override 'check' phase.
* gnu: python-cloudpickle: Update to 0.6.1.Marius Bakke2018-12-03
| | | | * gnu/packages/python.scm (python-cloudpickle): Update to 0.6.1.
* gnu: Add python-pywavelets.Marius Bakke2018-12-03
| | | | | * gnu/packages/python.scm (python-pywavelets, python2-pywavelets): New public variables.
* gnu: kicad: Fix build with Boost >= 1.68.Marius Bakke2018-12-03
| | | | * gnu/packages/engineering.scm (kicad)[arguments]: Add phase 'adjust-boost-include'.
* gnu: python-greenlet: Update to 0.4.15.Marius Bakke2018-12-03
| | | | * gnu/packages/python.scm (python-greenlet): Update to 0.4.15.
* gnu: python-geventhttpclient: Fix test failure.Marius Bakke2018-12-03
| | | | | * gnu/packages/python-web.scm (python-geventhttpclient)[arguments]: Add "--import-mode=append" to pytest invokation.
* doc: Remove footnotes about guile-json requirements.Eric Bavier2018-12-03
| | | | | | | Follow-up to 6efccabe4e2e3ea1bd14cd0e81bdb83d5f6baaea. * doc/guix.texi (Invoking guix import)[pypi, gem, cpan, json]: Remove footnotes mentioning requirement for Guile-JSON.
* doc: Fix "desktop" OS config example.Laura Lazzati2018-12-03
| | | | | | | * gnu/system/examples/desktop.tmpl (file-systems): Add 'file-system-label' call in 'device' field. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
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