| Commit message (Collapse) | Author | Age |
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Fixes a regression introduced in
bc499b113a598c0e7863da9887a4133472985713, whereby the default initrd
used by 'expression->derivation-in-linux-vm' would lack all the usual
modules: virtio, nls_iso8859-1, etc.
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Pass
#:linux-modules to 'base-initrd'.
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Fixes a bug whereby, for an "iso9660" file system, it would return
'("iso9660" "isofs"), i.e., both the key and the value.
Reported by Danny Milosavljevic <dannym@scratchpost.org>
at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=30629#115>.
* gnu/system/linux-initrd.scm (lookup-procedure): 'vhash-assoc' returns
a key/value pair; match it.
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* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.16.
[source]: Fetch via git.
[arguments]: Remove.
[native-inputs]: Replace python-nose with python-pytest.
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* gnu/packages/python.scm (python-xopen): Update to 0.3.2.
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* gnu/packages/bioconductor.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
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* gnu/packages/cran.scm (r-powerplus): New variable.
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* gnu/packages/cran.scm (r-np): New variable.
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* gnu/packages/cran.scm (r-phontools): New variable.
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* gnu/packages/cran.scm (r-complexplus): New variable.
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* gnu/packages/cran.scm (r-expm): New variable.
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* gnu/packages/cran.scm (r-trend): New variable.
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* gnu/packages/cran.scm (r-cubature): New variable.
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* gnu/packages/cran.scm (r-urca): New variable.
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* gnu/packages/cran.scm (r-fractal): New variable.
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* gnu/packages/cran.scm (r-extradistr): New variable.
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* gnu/packages/cran.scm (r-tsa): New variable.
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* gnu/packages/cran.scm (r-wmtsa): New variable.
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* gnu/packages/cran.scm (r-tseries): New variable.
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* gnu/packages/cran.scm (r-quantmod): New variable.
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* gnu/packages/cran.scm (r-sapa): New variable.
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* gnu/packages/cran.scm (r-ifultools): New variable.
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* gnu/packages/cran.scm (r-splus2r): New variable.
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* gnu/packages/cran.scm (r-leaps): New variable.
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* gnu/packages/cran.scm (r-ttr): New variable.
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* gnu/packages/graph.scm (r-rbiofabric): New variable.
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* gnu/packages/cran.scm (r-sna): New variable.
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* gnu/packages/cran.scm (r-statnet-common): New variable.
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* gnu/packages/cran.scm (r-network): New variable.
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* gnu/packages/web.scm (nghttp2): Update to 1.31.0.
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* gnu/packages/web.scm (libpsl): Update to 0.20.1.
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* gnu/packages/linux.scm (zerofree): Update to 1.1.1.
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* gnu/packages/python-web.scm (python-webencodings)[description]: Fix typo.
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* gnu/packages/debug.scm (delta)[arguments]: Remove unneeded MKDIR-P
calls.
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* gnu/packages/perl.scm (perl-mozilla-ca): Update to 20180117.
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* gnu/packages/perl-check.scm (perl-test-harness): Update to 3.41.
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* gnu/packages/pretty-print.scm (highlight)[arguments]: Construct the
Lua prefix programatically instead of hard-coding it.
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* gnu/packages/pretty-print.scm (highlight): Update to 3.42.
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* gnu/packages/haskell.scm (ghc-abstract-deque)[description]: Fix typos.
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* gnu/packages/qt.scm (qscintilla)[home-page]: Use HTTPS.
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* gnu/packages/suckless.scm (fortify-headers): Update to 0.9.
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* gnu/packages/version-control.scm (fossil)[arguments]: Substitute
INVOKE for SYSTEM* and end phases with #t.
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* gnu/packages/video.scm (gnome-mpv): Update to 0.14.
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* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Substitute
INSTALL-FILE for COPY-FILE with MKDIR-P.
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* gnu/packages/firmware.scm (ovmf): Substitute INVOKE for SYSTEM* and
end phases with #t.
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* gnu/packages/firmware.scm (ovmf)[home-page]: Use HTTPS.
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* gnu/packages/firmware.scm (b43-tools)[home-page]: Use HTTPS.
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* gnu/packages/firmware.scm (b43-tools)[arguments]: Substitute INVOKE
for SYSTEM* and FOR-EACH for EVERY, and end phases with #t.
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* gnu/packages/firmware.scm (b43-tools): Update to 0.0.0-1.27892ef.
[version]: Use our standard versioning scheme.
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* gnu/packages/python-web.scm (python-openid, python-terminado)
(python-geventhttpclient, python-cachecontrol, python-webencodings)
(python-s3transfer)[arguments]: Substitute INVOKE for SYSTEM* and end
phases with #t.
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* gnu/packages/python-web.scm (python-flask-script): Update to 2.0.6.
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