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* gnu: perl-autovivification: Update to 0.18.Efraim Flashner2018-11-10
| | | | * gnu/packages/perl.scm (perl-autovivification): Update to 0.18.
* gnu: idutils: Fix building with glibc@2.28.Efraim Flashner2018-11-10
| | | | | * gnu/packages/idutils.scm (idutils)[source]: Add snippet to patch bundled gnulib for glibc@2.28.
* gnu: sharutils: Remove false comment.Efraim Flashner2018-11-10
| | | | | | | This is a follow-up to b50d58b3445a85bf4395e2b767da10c2e3438902. * gnu/packages/compression.scm (sharutils)[source]: This snippet is, in fact, a snippet.
* gnu: lbzip2: Remove false comment.Efraim Flashner2018-11-10
| | | | | | | This is a follow-up to f268b744b84734b374a15feae1f02b9f2c4085c7. * gnu/packages/compression.scm (lbzip2)[source]: This snippet is, in fact, a snippet.
* gnu: lbzip2: Fix building with glibc@2.28.Efraim Flashner2018-11-10
| | | | | * gnu/packages/compression.scm (lbzip2)[source]: Add snippet to patch bundled gnulib for glibc@2.28.
* gnu: dvd+rw-tools: Use invoke.Efraim Flashner2018-11-10
| | | | * gnu/packages/cdrom.scm (dvd+rw-tools): Use 'invoke'.
* gnu: dvd+rw-tools: Fix building with glibc@2.28.Efraim Flashner2018-11-10
| | | | | * gnu/packages/cdrom.scm (dvd+rw-tools)[arguments]: Add custom phase to add missing import.
* gnu: f2fs-tools: Update to 1.11.0.Efraim Flashner2018-11-10
| | | | * gnu/packages/linux.scm (f2fs-tools): Update to 1.11.0.
* Merge branch 'master' into core-updatesMarius Bakke2018-11-09
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| * gnu: r-with-tests: Update to 3.5.1.Ricardo Wurmus2018-11-09
| | | | | | | | * gnu/packages/statistics.scm (r-with-tests): Update to 3.5.1.
| * gnu: r-with-tests: Use INVOKE.Ricardo Wurmus2018-11-09
| | | | | | | | | | * gnu/packages/statistics.scm (r-with-tests)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: Add emacs-gtk-look.Pierre Neidhardt2018-11-09
| | | | | | | | * gnu/packages/emacs.scm (emacs-gtk-look): New variable.
| * gnu: Add xmlrpc-c.Pierre Neidhardt2018-11-09
| | | | | | | | * gnu/packages/xml.scm (xmlrpc-c): New variable.
| * gnu: guile-newt: Update to revision 1.Mathieu Othacehe2018-11-09
| | | | | | | | * gnu/packages/guile.scm (guile-newt): Update to revision 1.
| * gnu: powertabeditor: Fetch sources from git.Ricardo Wurmus2018-11-09
| | | | | | | | * gnu/packages/music.scm (powertabeditor)[source]: Fetch from git.
| * gnu: powertabeditor: Use INVOKE.Ricardo Wurmus2018-11-09
| | | | | | | | | | * gnu/packages/music.scm (powertabeditor)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: wxmaxima: Update to 18.10.1.Kei Kebreau2018-11-09
| | | | | | | | | | | | | | | | * gnu/packages/maths.scm (wxmaxima): Update to 18.10.1. [source]: Update URL and remove patch. * gnu/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove patch.
| * gnu: PostgreSQL 9: Update to 9.6.11 [fixes CVE-2018-16850].Leo Famulari2018-11-08
| | | | | | | | * gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.11.
| * gnu: Add emacs-clang-format.Pierre Neidhardt2018-11-08
| | | | | | | | * gnu/packages/emacs.scm (emacs-clang-format): New variable.
| * gnu: kodi: Update to 18.0b5.Efraim Flashner2018-11-08
| | | | | | | | | | | | | | | | | | * gnu/packages/kodi.scm (kodi): Update to 18.0b5. [source]: Update snippet. [inputs]: Add flatbuffers, fstrcmp. (crossguid): Update to commit fef89a4174a7bf8cd99fa9154864ce9e8e3bf989. (libdvdnav/kodi, libdvdread/kodi): Update to 6.0.0-Leia-Alpha-3. (libdvdcss/kodi): Update to 1.4.2-Leia-Beta-5.
| * gnu: Add fstrcmp.Efraim Flashner2018-11-08
| | | | | | | | * gnu/packages/kodi.scm (fstrcmp): New variable.
| * doc: Add index entries.Laura Lazzati2018-11-08
| | | | | | | | | | | | * doc/guix.texi: Added various cindex tags to assist readers. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * services: elogind: Fix spelling errors of left value fields in elogind ↵Stefan Stefanović2018-11-08
| | | | | | | | | | | | | | | | | | | | config file. * gnu/services/desktop.scm (elogind-configuration-file)[ini-file]: Fix spelling of left value fields: InhibitDelayMaxSecs, HoldoffTimeoutSecs, IdleActionSeconds, RemoveIpc. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: python-ilinkedlist: Update to 0.3.1.Luther Thompson2018-11-08
| | | | | | | | | | | | * gnu/packages/python.scm (python-ilinkedlist): Update to 0.3.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: Add python-pyelftools.Vagrant Cascadian2018-11-08
| | | | | | | | | | | | | | * gnu/packages/python.scm (python-pyelftools): New public variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * gnu: libmusicbrainz: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/music.scm (libmusicbrainz)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: pd: Remove custom autoconf phase.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/music.scm (pd)[arguments]: Remove custom autoconf phase.
| * gnu: cmus: Fetch sources from git.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/music.scm (cmus)[source]: Fetch from git.
| * gnu: cmus: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/music.scm (cmus)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: pcc: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/c.scm (pcc)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: pplacer-scripts: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (pplacer-scripts)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: roary: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (roary)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: seek: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (seek)[arguments]: Use INVOKE and return #T unconditionally; patch "gen_tools_am" shebang in "bootstrap" phase.
| * gnu: sailfish: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (sailfish)[arguments]: Use INVOKE instead of SYSTEM*.
| * gnu: vsearch: Update to 2.9.1.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (vsearch): Update to 2.9.1. * gnu/packages/patches/vsearch-unbundle-cityhash.patch: Update.
| * gnu: sra-tools: Update to 2.9.3.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (sra-tools): Update to 2.9.3. [arguments]: Remove build phase patch-away-glibc-conflict.
| * gnu: plink-ng: Fetch sources from git.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/bioinformatics.scm (plink-ng)[source]: Fetch from git.
| * gnu: ncbi-vdb: Update to 2.9.3.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/bioinformatics.scm (ncbi-vdb): Update to 2.9.3.
| * gnu: ngs-sdk: Update to 2.9.3.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/bioinformatics.scm (ngs-sdk): Update to 2.9.3.
| * gnu: ngs-sdk: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (ngs-sdk)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: emboss: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (emboss)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: taxtastic: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (taxtastic)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: sra-tools: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: muscle: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (muscle)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: newick-utils: Remove custom autoconf phase.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/bioinformatics.scm (newick-utils)[arguments]: Remove.
| * gnu: mash: Remove custom autoconf phase.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/bioinformatics.scm (mash)[arguments]: Remove autoconf phase.
| * gnu: vsearch: Remove custom autogen phase.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/bioinformatics.scm (vsearch)[arguments]: Remove.
| * gnu: java-picard-1.113: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (java-picard-1.113)[arguments]: Use INVOKE and return #T unconditionally.
| * gnu: fraggenescan: Use INVOKE.Ricardo Wurmus2018-11-08
| | | | | | | | | | * gnu/packages/bioinformatics.scm (fraggenescan)[arguments]: Use INVOKE in build phases and return #T unconditionally.
| * gnu: sailfish: Fetch sources from git.Ricardo Wurmus2018-11-08
| | | | | | | | * gnu/packages/bioinformatics.scm (sailfish)[source]: Fetch from git.
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