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* gnu: r-biocpkgtools: Update to 1.4.6.Ricardo Wurmus2020-03-19
| | | | | | | * gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.4.6. [propagated-inputs]: Add r-biocfilecache, r-rappdirs, r-rlang, and r-tidyselect. [native-inputs]: Add r-knitr.
* gnu: r-biosigner: Update to 1.14.2.Ricardo Wurmus2020-03-19
| | | | | * gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.2. [native-inputs]: Remove r-rmarkdown, pandoc, and pandoc-citeproc.
* gnu: ungoogled-chromium: Update to 80.0.3987.149-0.516e2d9 [security fixes].Marius Bakke2020-03-19
| | | | | | | | | | This releases fixes CVE-2020-6422, CVE-2020-6424, CVE-2020-6425, CVE-2020-6426, CVE-2020-6427, CVE-2020-6428, CVE-2020-6429, CVE-2019-20503, and CVE-2020-6449. * gnu/packages/chromium.scm (%chromium-version): Set to 80.0.3987.149. (%ungoogled-revision): Set to 516e2d990a50a4bbeb8c583e56333c2935e2af95. (%chromium-origin, %ungoogled-origin): Update hashes.
* gnu: python2-cython: Exclude parallel tests on i686 systems.Marius Bakke2020-03-19
| | | | | * gnu/packages/python-xyz.scm (python2-cython)[arguments]: When building on i686-linux, override the 'check' phase.
* gnu: git: Enable parallel tests.Marius Bakke2020-03-19
| | | | * gnu/packages/version-control.scm (git)[arguments]: Remove #:parallel-testS?.
* gnu: varnish: Update to 6.4.0.Marius Bakke2020-03-19
| | | | * gnu/packages/web.scm (varnish): Update to 6.4.0.
* gnu: RocksDB: Update to 6.7.3.Marius Bakke2020-03-19
| | | | * gnu/packages/databases.scm (rocksdb): Update to 6.7.3.
* gnu: wpebackend-fdo: Update to 1.6.0.Marius Bakke2020-03-19
| | | | * gnu/packages/webkit.scm (wpebackend-fdo): Update to 1.6.0.
* gnu: libwpe: Update to 1.6.0.Marius Bakke2020-03-19
| | | | * gnu/packages/webkit.scm (libwpe): Update to 1.6.0.
* gnu: dav1d: Update to 0.6.0.Marius Bakke2020-03-19
| | | | * gnu/packages/video.scm (dav1d): Update to 0.6.0.
* gnu: libsoup: Update to 2.70.0.Marius Bakke2020-03-19
| | | | * gnu/packages/gnome.scm (libsoup): Update to 2.70.0.
* gnu: libsecret: Update to 0.20.2.Marius Bakke2020-03-19
| | | | * gnu/packages/gnome.scm (libsecret): Update to 0.20.2.
* gnu: git: Update to 2.25.2.Marius Bakke2020-03-19
| | | | * gnu/packages/version-control.scm (git): Update to 2.25.2.
* gnu: OpenSSL: Update replacement to 1.1.1e [fixes CVE-2019-1551].Marius Bakke2020-03-19
| | | | | | * gnu/packages/tls.scm (openssl-1.1.1d): Rename to ... (openssl-1.1.1e): ... this. Update to 1.1.1e. (openssl)[replacement]: Adjust accordingly.
* build-self: Import (ice-9 threads) in the compute-guix-derivation script.Marius Bakke2020-03-19
| | | | | | This is required for CALL-WITH-NEW-THREAD in Guile 3.0. * build-aux/build-self.scm (build-program): Import (ice-9 threads).
* gnu: sbcl-cl-webkit: Update to 20200319.Pierre Neidhardt2020-03-19
| | | | * gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Update to 20200319.
* gnu: glances: Deprecate python- prefix.Tobias Geerinckx-Rice2020-03-19
| | | | | | * gnu/package/python-xyz.scm (glances): New public variable renamed from…… (python-glances): …this now-deprecated one.
* gnu: Remove python2-glances variant.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/python-xyz.scm (python2-glances): Remove variable.
* gnu: python-glances: Update to 3.1.4.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/python-xyz.scm (python-glances): Update to 3.1.4.
* gnu: aircrack-ng: Update to 1.6.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/networking.scm (aircrack-ng): Update to 1.6.
* gnu: neomutt: Update to 20200313.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/mail.scm (neomutt): Update to 20200313.
* gnu: Use HTTPS for supported psyc.eu subdomains.Tobias Geerinckx-Rice2020-03-19
| | | | | * gnu/packages/messaging.scm (libpsyc)[home-page]: Use HTTPS. (perl-net-psyc)[source, description, home-page]: Likewise.
* gnu: camlp5: Update home page.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/ocaml.scm (camlp5)[home-page]: Update.
* gnu: jrnl: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/jrnl.scm (jrnl)[home-page]: Use HTTPS.
* gnu: libmygpo-qt: Update home page.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/gpodder.scm (libmygpo-qt)[home-page]: Update.
* gnu: camlzip: Update home page.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/ocaml.scm (camlzip)[home-page]: Update.
* gnu: lablgtk: Update to 2.18.10.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/ocaml.scm (lablgtk): Update to 2.18.10.
* gnu: bind: Update to 9.16.1.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/dns.scm (isc-bind): Update to 9.16.1.
* gnu: inxi-minimal: Update to 3.0.38-1.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/admin.scm (inxi-minimal): Update to 3.0.38-1.
* gnu: chafa: Update to 1.2.2.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/image-viewers.scm (chafa): Update to 1.2.2.
* gnu: workrave: Update to 1.10.37.Tobias Geerinckx-Rice2020-03-19
| | | | | * gnu/packages/gnome.scm (workrave): Update to 1.10.37. [arguments]: Disable #:tests?.
* gnu: dovecot: Use libsodium.Tobias Geerinckx-Rice2020-03-19
| | | | | | | | This adds support for ARGON2I and ARGON2ID password hashing in exchange for a <1% increase in closure size. * gnu/packages/mail.scm (dovecot)[inputs]: Add libsodium. (dovecot-libsodium-plugin)[description]: Note its use.
* gnu: dovecot: Use SQLite.Tobias Geerinckx-Rice2020-03-19
| | | | | * gnu/packages/mail.scm (dovecot)[arguments]: Add "--with-sqlite" to #:configure-flags.
* gnu: extempore: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/music.scm (extempore)[home-page]: Use HTTPS.
* gnu: r-rhpcblasctl: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/cran.scm (r-rhpcblasctl)[home-page]: Use HTTPS.
* gnu: r-snowfall: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-19
| | | | * gnu/packages/cran.scm (r-snowfall)[home-page]: Use HTTPS.
* gnu: Use HTTPS for non.tuxfamily.org home pages.Tobias Geerinckx-Rice2020-03-19
| | | | | * gnu/packages/music.scm (non-timeline, non-mixer, non-session-manager) (non-sequencer)[home-page]: Use HTTPS.
* gnu: emacs-org-static-blog: Fix typo in description.Nicolas Goaziou2020-03-18
| | | | * gnu/packages/emacs-xyz.scm (emacs-org-static-blog)[description]: Fix typo.
* gnu: linux-libre: Update to 5.4.26.Mark H Weaver2020-03-18
| | | | | * gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.26. (linux-libre-5.4-pristine-source): Update hash.
* gnu: linux-libre@4.19: Update to 4.19.111.Mark H Weaver2020-03-18
| | | | | * gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.111. (linux-libre-4.19-pristine-source): Update hash.
* doc: Correctly state the size of the glibc-locales package.Leo Famulari2020-03-18
| | | | * doc/guix.texi (Application Setup): Give the correct size.
* gnu: tor: Update to 0.4.2.7.Tobias Geerinckx-Rice2020-03-18
| | | | * gnu/packages/tor.scm (tor): Update to 0.4.2.7.
* gnu: pioneer: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-18
| | | | * gnu/packages/games.scm (pioneer)[home-page]: Use HTTPS.
* gnu: dovecot: Support LZ4 compression.Tobias Geerinckx-Rice2020-03-18
| | | | * gnu/packages/mail.scm (dovecot)[inputs]: Add lz4.
* gnu: r-stabledist: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-18
| | | | * gnu/packages/cran.scm (r-stabledist)[home-page]: Use HTTPS.
* gnu: r-proc: Update home page.Tobias Geerinckx-Rice2020-03-18
| | | | * gnu/packages/cran.scm (r-proc)[home-page]: Follow (HTTPS) redirection.
* gnu: r-stepwise: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-18
| | | | * gnu/packages/cran.scm (r-stepwise)[home-page]: Use HTTPS.
* gnu: r-ldheatmap: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-18
| | | | * gnu/packages/cran.scm (r-ldheatmap)[home-page]: Use HTTPS.
* gnu: r-shinyace: Use HTTPS home page.Tobias Geerinckx-Rice2020-03-18
| | | | * gnu/packages/cran.scm (r-shinyace)[home-page]: Use HTTPS.
* doc: Follow-up commit to f6b950319c.Maxim Cournoyer2020-03-18
| | | | | | * doc/guix.texi (Invoking guix deploy): Fix typo in example. Reported-by: Ludovic Courtès <ludo@gnu.org>
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