diff options
Diffstat (limited to 'gnu')
78 files changed, 652 insertions, 1738 deletions
diff --git a/gnu/local.mk b/gnu/local.mk index 165b830673..d7eda9f811 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -737,7 +737,6 @@ dist_patch_DATA = \ %D%/packages/patches/gpm-glibc-2.26.patch \ %D%/packages/patches/gpsbabel-minizip.patch \ %D%/packages/patches/gpsbabel-qstring.patch \ - %D%/packages/patches/graphite2-ffloat-store.patch \ %D%/packages/patches/grep-timing-sensitive-test.patch \ %D%/packages/patches/groff-source-date-epoch.patch \ %D%/packages/patches/gsl-test-i686.patch \ @@ -809,7 +808,6 @@ dist_patch_DATA = \ %D%/packages/patches/kobodeluxe-midicon-segmentation-fault.patch \ %D%/packages/patches/kobodeluxe-graphics-window-signed-char.patch \ %D%/packages/patches/laby-make-install.patch \ - %D%/packages/patches/lcms-CVE-2016-10165.patch \ %D%/packages/patches/ldc-bootstrap-disable-tests.patch \ %D%/packages/patches/ldc-1.7.0-disable-phobos-tests.patch \ %D%/packages/patches/ledger-fix-uninitialized.patch \ @@ -860,8 +858,6 @@ dist_patch_DATA = \ %D%/packages/patches/libssh-hostname-parser-bug.patch \ %D%/packages/patches/libssh2-fix-build-failure-with-gcrypt.patch \ %D%/packages/patches/libtar-CVE-2013-4420.patch \ - %D%/packages/patches/libtasn1-CVE-2017-10790.patch \ - %D%/packages/patches/libtasn1-CVE-2018-6003.patch \ %D%/packages/patches/libtheora-config-guess.patch \ %D%/packages/patches/libtirpc-missing-headers.patch \ %D%/packages/patches/libtiff-CVE-2017-9935.patch \ @@ -873,7 +869,6 @@ dist_patch_DATA = \ %D%/packages/patches/libvorbis-CVE-2017-14632.patch \ %D%/packages/patches/libvorbis-CVE-2017-14633.patch \ %D%/packages/patches/libvpx-CVE-2016-2818.patch \ - %D%/packages/patches/libxcb-python-3.5-compat.patch \ %D%/packages/patches/libxslt-generated-ids.patch \ %D%/packages/patches/libxt-guix-search-paths.patch \ %D%/packages/patches/lierolibre-check-unaligned-access.patch \ @@ -970,8 +965,6 @@ dist_patch_DATA = \ %D%/packages/patches/patchutils-xfail-gendiff-tests.patch \ %D%/packages/patches/patch-hurd-path-max.patch \ %D%/packages/patches/pcmanfm-CVE-2017-8934.patch \ - %D%/packages/patches/pcre2-CVE-2017-7186.patch \ - %D%/packages/patches/pcre2-CVE-2017-8786.patch \ %D%/packages/patches/perl-file-path-CVE-2017-6512.patch \ %D%/packages/patches/perl-autosplit-default-time.patch \ %D%/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch \ @@ -1099,7 +1092,6 @@ dist_patch_DATA = \ %D%/packages/patches/t1lib-CVE-2010-2642.patch \ %D%/packages/patches/t1lib-CVE-2011-0764.patch \ %D%/packages/patches/t1lib-CVE-2011-1552+.patch \ - %D%/packages/patches/tar-CVE-2016-6321.patch \ %D%/packages/patches/tar-skip-unreliable-tests.patch \ %D%/packages/patches/tclxml-3.2-install.patch \ %D%/packages/patches/tcsh-fix-autotest.patch \ @@ -1168,8 +1160,6 @@ dist_patch_DATA = \ %D%/packages/patches/wpa-supplicant-krack-followups.patch \ %D%/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch \ %D%/packages/patches/xboing-CVE-2004-0149.patch \ - %D%/packages/patches/xcb-proto-python3-print.patch \ - %D%/packages/patches/xcb-proto-python3-whitespace.patch \ %D%/packages/patches/xdotool-fix-makefile.patch \ %D%/packages/patches/xf86-video-ark-remove-mibstore.patch \ %D%/packages/patches/xf86-video-ast-remove-mibstore.patch \ diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm index 2aa1777db3..57f273cc7a 100644 --- a/gnu/packages/algebra.scm +++ b/gnu/packages/algebra.scm @@ -5,7 +5,7 @@ ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016, 2018 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il> -;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2017 Eric Bavier <bavier@member.fsf.org> ;;; @@ -519,31 +519,31 @@ a C program.") (license license:bsd-3))) (define-public fftw - ;; TODO: Make this 3.3.7 (see below) on the next upgrade cycle. (package (name "fftw") - (version "3.3.5") + (version "3.3.7") (source (origin (method url-fetch) (uri (string-append "ftp://ftp.fftw.org/pub/fftw/fftw-" version".tar.gz")) (sha256 (base32 - "1kwbx92ps0r7s2mqy7lxbxanslxdzj7dp7r7gmdkzv1j8yqf3kwf")))) + "0wsms8narnbhfsa8chdflv2j9hzspvflblnqdn7hw8x5xdzrnq1v")))) (build-system gnu-build-system) (arguments '(#:configure-flags '("--enable-shared" "--enable-openmp" "--enable-threads") - #:phases (alist-cons-before - 'build 'no-native + #:phases + (modify-phases %standard-phases + (add-before 'build 'no-native (lambda _ ;; By default '-mtune=native' is used. However, that may ;; cause the use of ISA extensions (SSE2, etc.) that are ;; not necessarily available on the user's machine when ;; that package is built on a different machine. (substitute* (find-files "." "Makefile$") - (("-mtune=native") ""))) - %standard-phases))) + (("-mtune=native") "")) + #t))))) (native-inputs `(("perl" ,perl))) (home-page "http://fftw.org") (synopsis "Computing the discrete Fourier transform") @@ -579,25 +579,12 @@ cosine/ sine transforms or DCT/DST).") (string-append (package-description fftw) " With OpenMPI parallelism support.")))) -(define-public fftw-3.3.7 - ;; TODO: Make this the default 'fftw' on the next upgrade cycle. - (package - (inherit fftw) - (version "3.3.7") - (source (origin - (method url-fetch) - (uri (string-append "ftp://ftp.fftw.org/pub/fftw/fftw-" - version".tar.gz")) - (sha256 - (base32 - "0wsms8narnbhfsa8chdflv2j9hzspvflblnqdn7hw8x5xdzrnq1v")))))) - (define-public fftw-avx (package - (inherit fftw-3.3.7) + (inherit fftw) (name "fftw-avx") (arguments - (substitute-keyword-arguments (package-arguments fftw-3.3.7) + (substitute-keyword-arguments (package-arguments fftw) ((#:configure-flags flags ''()) ;; Enable AVX & co. See details at: ;; <http://fftw.org/fftw3_doc/Installation-on-Unix.html>. diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm index d8569096ab..eb7b79ee7a 100644 --- a/gnu/packages/audio.scm +++ b/gnu/packages/audio.scm @@ -1091,7 +1091,7 @@ also play midifiles using a Soundfont.") (arguments '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ (substitute* "bootstrap" (("\r\n") "\n")) (zero? (system* "sh" "bootstrap"))))))) @@ -2483,12 +2483,6 @@ Tracker 3 S3M and Impulse Tracker IT files.") ("automake" ,automake) ("libtool" ,libtool) ("file" ,file))) - (arguments - '(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "sh" "bootstrap"))))))) (home-page "http://www.surina.net/soundtouch/") (synopsis "Audio processing library for changing tempo, pitch and playback rate") @@ -2891,12 +2885,6 @@ point audio data.") "01xi3rvdmil9nawsha04iagjylqr1l9v9vlzk99scs8c207l58i4")))) (build-system gnu-build-system) ;; The source tarball is not bootstrapped. - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-vfi"))))))) - ;; Bootstrapping tools (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) @@ -3109,12 +3097,6 @@ mixers.") (base32 "1qinf41wl2ihx54zmmhanycihwjkn7dn1cicq6pp4rqbiv79b95x")))) (build-system gnu-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vif"))))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) @@ -3334,7 +3316,7 @@ representations.") (list (string-append "cava_LDFLAGS = -L" lib " -Wl,-rpath " lib))) #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda* (#:key outputs #:allow-other-keys) (setenv "HOME" (getcwd)) (invoke "sh" "autogen.sh"))) diff --git a/gnu/packages/autotools.scm b/gnu/packages/autotools.scm index 9394ee014f..b7df530088 100644 --- a/gnu/packages/autotools.scm +++ b/gnu/packages/autotools.scm @@ -7,6 +7,7 @@ ;;; Copyright © 2016 David Thompson <davet@gnu.org> ;;; Copyright © 2017 ng0 <ng0@infotropique.org> ;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -247,14 +248,14 @@ output is indexed in many ways to simplify browsing.") (define-public automake (package (name "automake") - (version "1.15.1") + (version "1.16") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/automake/automake-" version ".tar.xz")) (sha256 (base32 - "1bzd9g32dfm4rsbw93ld9x7b5nc1y6i4m6zp032qf1i28a8s6sxg")) + "12jvcmkcmd5p14b41w9f7ixd3sca97pymd6lqbkwnl8qn6bjv3zr")) (patches (search-patches "automake-skip-amhello-tests.patch")))) (build-system gnu-build-system) @@ -286,32 +287,33 @@ output is indexed in many ways to simplify browsing.") (setenv "CONFIG_SHELL" sh) #t))) - ;; Files like `install-sh', `mdate.sh', etc. must use - ;; #!/bin/sh, otherwise users could leak erroneous shebangs - ;; in the wild. See <http://bugs.gnu.org/14201> for an - ;; example. - (add-after 'install 'unpatch-shebangs - (lambda* (#:key outputs #:allow-other-keys) - (let* ((out (assoc-ref outputs "out")) - (dir (string-append out "/share"))) - (define (starts-with-shebang? file) - (equal? (call-with-input-file file - (lambda (p) - (list (get-u8 p) (get-u8 p)))) - (map char->integer '(#\# #\!)))) + ;; Files like `install-sh', `mdate.sh', etc. must use + ;; #!/bin/sh, otherwise users could leak erroneous shebangs + ;; in the wild. See <http://bugs.gnu.org/14201> for an + ;; example. + (add-after 'install 'unpatch-shebangs + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (dir (string-append out "/share"))) + (define (starts-with-shebang? file) + (equal? (call-with-input-file file + (lambda (p) + (list (get-u8 p) (get-u8 p)))) + (map char->integer '(#\# #\!)))) - (for-each (lambda (file) - (when (and (starts-with-shebang? file) - (executable-file? file)) - (format #t "restoring shebang on `~a'~%" - file) - (substitute* file - (("^#!.*/bin/sh") - "#!/bin/sh") - (("^#!.*/bin/env(.*)$" _ args) - (string-append "#!/usr/bin/env" - args))))) - (find-files dir ".*")))))))) + (for-each (lambda (file) + (when (and (starts-with-shebang? file) + (executable-file? file)) + (format #t "restoring shebang on `~a'~%" + file) + (substitute* file + (("^#!.*/bin/sh") + "#!/bin/sh") + (("^#!.*/bin/env(.*)$" _ args) + (string-append "#!/usr/bin/env" + args))))) + (find-files dir ".*")) + #t)))))) (home-page "https://www.gnu.org/software/automake/") (synopsis "Making GNU standards-compliant Makefiles") (description diff --git a/gnu/packages/backup.scm b/gnu/packages/backup.scm index 2fafa2c4a6..5487157c86 100644 --- a/gnu/packages/backup.scm +++ b/gnu/packages/backup.scm @@ -278,9 +278,6 @@ random access nor for in-place modification.") `(#:parallel-build? #f ;race conditions #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (invoke "autoreconf"))) (add-before 'build 'qualify-inputs (lambda* (#:key inputs #:allow-other-keys) ;; This script is full of pitfalls. Fix some that particularly diff --git a/gnu/packages/base.scm b/gnu/packages/base.scm index e91f7d43ef..f630ccec2b 100644 --- a/gnu/packages/base.scm +++ b/gnu/packages/base.scm @@ -7,11 +7,12 @@ ;;; Copyright © 2014, 2015 Manolis Fragkiskos Ragkousis <manolis837@gmail.com> ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> -;;; Copyright © 2016 Alex Vong <alexvong1995@gmail.com> +;;; Copyright © 2016, 2018 Alex Vong <alexvong1995@gmail.com> ;;; Copyright © 2017 Rene Saavedra <rennes@openmailbox.org> ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com> ;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2017 Eric Bavier <bavier@member.fsf.org> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018 Ricardo Wurmus <rekado@elephly.net> ;;; ;;; This file is part of GNU Guix. @@ -168,16 +169,15 @@ implementation offers several extensions over the standard utility.") (define-public tar (package (name "tar") - (version "1.29") + (version "1.30") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/tar/tar-" version ".tar.xz")) (sha256 (base32 - "097hx7sbzp8qirl4m930lw84kn0wmxhmq7v1qpra3mrg0b8cyba0")) - (patches (search-patches "tar-CVE-2016-6321.patch" - "tar-skip-unreliable-tests.patch")))) + "1lyjyk8z8hdddsxw0ikchrsfg3i0x3fsh7l63a8jgaz1n7dr5gzi")) + (patches (search-patches "tar-skip-unreliable-tests.patch")))) (build-system gnu-build-system) ;; Note: test suite requires ~1GiB of disk space. (arguments @@ -189,7 +189,13 @@ implementation offers several extensions over the standard utility.") (substitute* "src/system.c" (("/bin/sh") (string-append bash "/bin/sh"))) - #t)))))) + #t)))) + + ;; Test #92 "link mismatch" expects "a/z: Not linked to a/y" but gets + ;; "a/y: Not linked to a/z" and fails, presumably due to differences in + ;; the order in which 'diff' traverses directories. That leads to a + ;; test failure even though conceptually the test passes. Skip it. + #:make-flags '("TESTSUITEFLAGS=-k '!link mismatch'"))) ;; When cross-compiling, the 'set-shell-file-name' phase needs to be able ;; to refer to the target Bash. @@ -304,14 +310,14 @@ used to apply commands with arbitrarily long arguments.") (define-public coreutils (package (name "coreutils") - (version "8.28") + (version "8.29") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/coreutils/coreutils-" version ".tar.xz")) (sha256 (base32 - "0r8c1bgm68kl70j1lgd0rv12iykw6143k4m9a56xip9rc2hv25qi")))) + "0plm1zs9il6bb5mk881qvbghq4glc8ybbgakk2lfzb0w64fgml4j")))) (build-system gnu-build-system) (inputs `(("acl" ,acl) ; TODO: add SELinux ("gmp" ,gmp) ;bignums in 'expr', yay! @@ -1063,30 +1069,25 @@ command.") "--host=i586-pc-gnu" "--enable-obsolete-rpc")) ((#:phases _) - '(alist-replace - 'install - (lambda* (#:key outputs #:allow-other-keys) - (and (zero? (system* "make" "install-headers")) - - ;; Make an empty stubs.h to work around not being able to - ;; produce a valid stubs.h and causing the build to fail. See - ;; <http://lists.gnu.org/archive/html/guix-devel/2014-04/msg00233.html>. - (let ((out (assoc-ref outputs "out"))) - (close-port - (open-output-file - (string-append out "/include/gnu/stubs.h")))))) - - ;; Nothing to build. - (alist-delete - 'build - - (alist-cons-before - 'configure 'pre-configure - (lambda _ - ;; Use the right 'pwd'. - (substitute* "configure" - (("/bin/pwd") "pwd"))) - %standard-phases)))))))) + '(modify-phases %standard-phases + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (invoke "make" "install-headers") + + ;; Make an empty stubs.h to work around not being able to + ;; produce a valid stubs.h and causing the build to fail. See + ;; <http://lists.gnu.org/archive/html/guix-devel/2014-04/msg00233.html>. + (let ((out (assoc-ref outputs "out"))) + (close-port + (open-output-file + (string-append out "/include/gnu/stubs.h")))))) + (delete 'build) ; nothing to build + (add-before 'configure 'patch-configure-script + (lambda _ + ;; Use the right 'pwd'. + (substitute* "configure" + (("/bin/pwd") "pwd")) + #t)))))))) (define-public tzdata (package diff --git a/gnu/packages/bash.scm b/gnu/packages/bash.scm index b8b0ae58f6..2cc0faf190 100644 --- a/gnu/packages/bash.scm +++ b/gnu/packages/bash.scm @@ -71,7 +71,14 @@ (9 "0g1l56kvw61rpw7dqa9fcl9llkl693h73g631hrhxlm030ddssqb") (10 "01lfhrkdsdkdz8ypzapr614ras23x7ckjnr60aa5bzkaqprccrc4") (11 "038p7mhnq9m65g505hi3827jkf9f35nd1cy00w8mwafpyxp44mnx") - (12 "0gh6lbb1rwpk44pvbamm6vzdfi50xnwkqd9v7s8cjwk3pz973hps"))) + (12 "0gh6lbb1rwpk44pvbamm6vzdfi50xnwkqd9v7s8cjwk3pz973hps") + (13 "1djkx0w9v62q78gz3jsvamj1jq53i6hbfrfhhsw86ihwpjnfy98v") + (14 "0z5ikcq9zyxw79d0z36r5p0mspnb5piavbv03jmlan1wnknmrxx7") + (15 "09n307fi1j257abhm295k6ksmnzw47ka2zhnr0i5lbdnpvn04xnk") + (16 "1cgi1y6mifm8hsgv4avj5ih76535js3qba1sqwbfvp7si76927sh") + (17 "0w6jpj2giakji1ir83rpkx1y7n7xqppah3j748m6dm38hywr0gvp") + (18 "1k58h4wxbsg7r4rwhrvzx5hfbapba2nxjysbhh6qp6ki5ys99i2v") + (19 "07n1i5610lbs672x1s8g82qn3qfj06s0ip3z80sri0g8vxp0s5r7"))) (define (download-patches store count) "Download COUNT Bash patches into store. Return a list of @@ -92,9 +99,7 @@ number/base32-hash tuples, directly usable in the 'patch-series' form." 1)) (define-public bash - (let* ((cppflags (string-join '("-DSYS_BASHRC='\"/etc/bashrc\"'" - "-DSYS_BASH_LOGOUT='\"/etc/bash_logout\"'" - "-DDEFAULT_PATH_VALUE='\"/no-such-path\"'" + (let* ((cppflags (string-join '("-DDEFAULT_PATH_VALUE='\"/no-such-path\"'" "-DSTANDARD_UTILS_PATH='\"/no-such-path\"'" "-DNON_INTERACTIVE_LOGIN_SHELLS" "-DSSH_SOURCE_BASHRC") diff --git a/gnu/packages/bdw-gc.scm b/gnu/packages/bdw-gc.scm index f9fda96bb2..10e8fe848f 100644 --- a/gnu/packages/bdw-gc.scm +++ b/gnu/packages/bdw-gc.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012, 2013, 2014, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2016 Leo Famulari <leo@famulari.name> +;;; Copyright © 2016, 2018 Leo Famulari <leo@famulari.name> ;;; Copyright © 2017 Rene Saavedra <rennes@openmailbox.org> ;;; ;;; This file is part of GNU Guix. @@ -30,14 +30,14 @@ (define-public libgc (package (name "libgc") - (version "7.6.0") + (version "7.6.4") (source (origin (method url-fetch) (uri (string-append "http://www.hboehm.info/gc/gc_source/gc-" version ".tar.gz")) (sha256 (base32 - "143x7g0d0k6250ai6m2x3l4y352mzizi4wbgrmahxscv2aqjhjm1")))) + "076dzsqqyxd3nlzs0z277vvhqjp8nv5dqi763s0m90zr6ljiyk5r")))) (build-system gnu-build-system) (arguments `(#:configure-flags @@ -91,7 +91,7 @@ C or C++ programs, though that is not its primary goal.") (define-public libatomic-ops (package (name "libatomic-ops") - (version "7.4.8") + (version "7.6.2") (source (origin (method url-fetch) (uri (string-append @@ -99,13 +99,13 @@ C or C++ programs, though that is not its primary goal.") version "/libatomic_ops-" version ".tar.gz")) (sha256 (base32 - "0sj3plzpbqgxrqpjq3w2zi3zxxqqps71ncdwk5s1k30i9d9da1f4")))) + "1rif2hjscq5mh639nsnjhb90c01gnmy1sbmj6x6hsn1xmpnj95r1")))) (build-system gnu-build-system) (outputs '("out" "debug")) (synopsis "Accessing hardware atomic memory update operations") (description "This C library provides semi-portable access to hardware-provided atomic -memory update operations on a number architectures. These might allow you to +memory update operations on a number of architectures. These might allow you to write code that does more interesting things in signal handlers, write lock-free code, experiment with thread programming paradigms, etc.") (home-page "https://github.com/ivmai/libatomic_ops/") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 567dd2c24b..d0873c9676 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4828,9 +4828,9 @@ distribution, coverage uniformity, strand specificity, etc.") "Data2DB" "PCL2Bin"))) (modify-phases %standard-phases - (add-before 'configure 'bootstrap + (replace 'bootstrap (lambda _ - (zero? (system* "bash" "gen_auto")))) + (invoke "bash" "gen_auto"))) (add-after 'build 'build-additional-tools (lambda* (#:key make-flags #:allow-other-keys) (every (lambda (dir) @@ -10937,13 +10937,6 @@ droplet sequencing. It has been particularly tailored for Drop-seq.") (sha256 (base32 "0g38g8s3npr0gjm9fahlbhiskyfws9l5i0x1ml3rakzj7az5l9c9")))) - (arguments - (substitute-keyword-arguments (package-arguments htslib) - ((#:phases phases) - `(modify-phases ,phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vif")))))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) diff --git a/gnu/packages/boost.scm b/gnu/packages/boost.scm index f4ba82810a..69fbc2777a 100644 --- a/gnu/packages/boost.scm +++ b/gnu/packages/boost.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2015 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be> ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2018 Arun Isaac <arunisaac@systemreboot.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -37,7 +38,7 @@ (define-public boost (package (name "boost") - (version "1.64.0") + (version "1.66.0") (source (origin (method url-fetch) (uri (string-append @@ -46,7 +47,7 @@ ".tar.bz2")) (sha256 (base32 - "0cikd35xfkpg9nnl76yqqnqxnf3hyfjjww8xjd4akflprsm5rk3v")))) + "1aaw48cmimsskzgiclwn0iifp62a5iw9cbqrhfari876af1828ap")))) (build-system gnu-build-system) (inputs `(("icu4c" ,icu4c) ("zlib" ,zlib))) @@ -73,8 +74,7 @@ '())) #:phases (modify-phases %standard-phases - (replace - 'configure + (replace 'configure (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) (substitute* '("libs/config/configure" @@ -88,21 +88,22 @@ (setenv "SHELL" (which "sh")) (setenv "CONFIG_SHELL" (which "sh")) - (zero? (system* "./bootstrap.sh" - (string-append "--prefix=" out) - "--with-toolset=gcc"))))) - (replace - 'build + (invoke "./bootstrap.sh" + (string-append "--prefix=" out) + "--with-toolset=gcc") + #t))) + (replace 'build (lambda* (#:key outputs make-flags #:allow-other-keys) - (zero? (apply system* "./b2" - (format #f "-j~a" (parallel-job-count)) - make-flags)))) - (replace - 'install + (apply invoke "./b2" + (format #f "-j~a" (parallel-job-count)) + make-flags) + #t)) + (replace 'install (lambda* (#:key outputs make-flags #:allow-other-keys) - (zero? (apply system* "./b2" "install" make-flags))))))) + (apply invoke "./b2" "install" make-flags) + #t))))) - (home-page "http://boost.org") + (home-page "http://www.boost.org") (synopsis "Peer-reviewed portable C++ source libraries") (description "A collection of libraries intended to be widely useful, and usable diff --git a/gnu/packages/ci.scm b/gnu/packages/ci.scm index a559a4011d..9e5d42952f 100644 --- a/gnu/packages/ci.scm +++ b/gnu/packages/ci.scm @@ -147,9 +147,6 @@ (string-append "--docdir=" %output "/doc/hydra-" ,version))) #:phases (modify-phases %standard-phases - (add-after - 'unpack 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-vfi")))) (add-before 'check 'check-setup (lambda _ (setenv "LOGNAME" "test.log"))) @@ -221,8 +218,6 @@ their dependencies.") (substitute* "build-aux/git-version-gen" (("#!/bin/sh") (string-append "#!" (which "sh")))) #t)) - (add-after 'patch-/bin/sh 'bootstrap - (lambda _ (zero? (system* "sh" "bootstrap")))) (add-after 'install 'wrap-program (lambda* (#:key inputs outputs #:allow-other-keys) ;; Wrap the 'cuirass' command to refer to the right modules. diff --git a/gnu/packages/commencement.scm b/gnu/packages/commencement.scm index fe9fbebcc2..33b957adfe 100644 --- a/gnu/packages/commencement.scm +++ b/gnu/packages/commencement.scm @@ -4,6 +4,7 @@ ;;; Copyright © 2012 Nikita Karetnikov <nikita@karetnikov.org> ;;; Copyright © 2014, 2015, 2017 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2017, 2018 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -90,12 +91,14 @@ `(modify-phases ,phases (replace 'build (lambda _ - (zero? (system* "./build.sh")))) + (invoke "./build.sh") + #t)) (replace 'install (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) (bin (string-append out "/bin"))) - (install-file "make" bin))))))))) + (install-file "make" bin) + #t)))))))) (native-inputs '()) ; no need for 'pkg-config' (inputs %bootstrap-inputs)))) @@ -183,28 +186,12 @@ ,cf))))) (inputs %boot0-inputs)))) -;; gcc-4.9 was fixed late in the core-update cycle and so this GCC is only -;; needed to prevent a full world rebuild, and can be replaced with gcc-4.9. -(define gcc-for-libstdc++ - (package (inherit gcc-4.9) - (version "4.9.4") - (source (origin - (method url-fetch) - (uri (string-append "mirror://gnu/gcc/gcc-" - version "/gcc-" version ".tar.bz2")) - (sha256 - (base32 - "14l06m7nvcvb0igkbip58x59w3nq6315k6jcz3wr9ch1rn9d44bc")) - (patches (search-patches "gcc-arm-bug-71399.patch" - "gcc-libvtv-runpath.patch" - "gcc-fix-texi2pod.patch")))))) - (define libstdc++-boot0 ;; GCC's libcc1 is always built as a shared library (the top-level ;; 'Makefile.def' forcefully adds --enable-shared) and thus needs to refer ;; to libstdc++.so. We cannot build libstdc++-5.3 because it relies on ;; C++14 features missing in some of our bootstrap compilers. - (let ((lib (package-with-bootstrap-guile (make-libstdc++ gcc-for-libstdc++)))) + (let ((lib (package-with-bootstrap-guile (make-libstdc++ gcc-4.9)))) (package (inherit lib) (name "libstdc++-boot0") @@ -262,42 +249,40 @@ "--(with-system-zlib|enable-languages.*)" <>) ,flags))) ((#:phases phases) - `(alist-cons-after - 'unpack 'unpack-gmp&co - (lambda* (#:key inputs #:allow-other-keys) - (let ((gmp (assoc-ref %build-inputs "gmp-source")) - (mpfr (assoc-ref %build-inputs "mpfr-source")) - (mpc (assoc-ref %build-inputs "mpc-source"))) - - ;; To reduce the set of pre-built bootstrap inputs, build - ;; GMP & co. from GCC. - (for-each (lambda (source) - (or (zero? (system* "tar" "xvf" source)) - (error "failed to unpack tarball" - source))) - (list gmp mpfr mpc)) - - ;; Create symlinks like `gmp' -> `gmp-x.y.z'. - ,@(map (lambda (lib) - ;; Drop trailing letters, as gmp-6.0.0a unpacks - ;; into gmp-6.0.0. - `(symlink ,(string-trim-right - (package-full-name lib) - char-set:letter) - ,(package-name lib))) - (list gmp-6.0 mpfr mpc)))) - (alist-cons-after - 'install 'symlink-libgcc_eh - (lambda* (#:key outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "lib"))) - ;; Glibc wants to link against libgcc_eh, so provide - ;; it. - (with-directory-excursion - (string-append out "/lib/gcc/" - ,(boot-triplet) - "/" ,(package-version gcc)) - (symlink "libgcc.a" "libgcc_eh.a")))) - ,phases)))))) + `(modify-phases ,phases + (add-after 'unpack 'unpack-gmp&co + (lambda* (#:key inputs #:allow-other-keys) + (let ((gmp (assoc-ref %build-inputs "gmp-source")) + (mpfr (assoc-ref %build-inputs "mpfr-source")) + (mpc (assoc-ref %build-inputs "mpc-source"))) + + ;; To reduce the set of pre-built bootstrap inputs, build + ;; GMP & co. from GCC. + (for-each (lambda (source) + (invoke "tar" "xvf" source)) + (list gmp mpfr mpc)) + + ;; Create symlinks like `gmp' -> `gmp-x.y.z'. + ,@(map (lambda (lib) + ;; Drop trailing letters, as gmp-6.0.0a unpacks + ;; into gmp-6.0.0. + `(symlink ,(string-trim-right + (package-full-name lib) + char-set:letter) + ,(package-name lib))) + (list gmp-6.0 mpfr mpc)) + #t))) + (add-after 'install 'symlink-libgcc_eh + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "lib"))) + ;; Glibc wants to link against libgcc_eh, so provide + ;; it. + (with-directory-excursion + (string-append out "/lib/gcc/" + ,(boot-triplet) + "/" ,(package-version gcc)) + (symlink "libgcc.a" "libgcc_eh.a")) + #t)))))))) (inputs `(("gmp-source" ,(package-source gmp-6.0)) ("mpfr-source" ,(package-source mpfr)) @@ -512,29 +497,29 @@ the bootstrap environment." "--enable-obsolete-rpc") ,flags)) ((#:phases phases) - `(alist-cons-before - 'configure 'pre-configure - (lambda* (#:key inputs #:allow-other-keys) - ;; Don't clobber CPATH with the bootstrap libc. - (setenv "NATIVE_CPATH" (getenv "CPATH")) - (unsetenv "CPATH") - - ;; Tell 'libpthread' where to find 'libihash' on Hurd systems. - ,@(if (hurd-triplet? (%current-system)) - `((substitute* "libpthread/Makefile" - (("LDLIBS-pthread.so =.*") - (string-append "LDLIBS-pthread.so = " - (assoc-ref %build-inputs "kernel-headers") - "/lib/libihash.a\n")))) - '()) - - ;; 'rpcgen' needs native libc headers to be built. - (substitute* "sunrpc/Makefile" - (("sunrpc-CPPFLAGS =.*" all) - (string-append "CPATH = $(NATIVE_CPATH)\n" - "export CPATH\n" - all "\n")))) - ,phases))))) + `(modify-phases ,phases + (add-before 'configure 'pre-configure + (lambda* (#:key inputs #:allow-other-keys) + ;; Don't clobber CPATH with the bootstrap libc. + (setenv "NATIVE_CPATH" (getenv "CPATH")) + (unsetenv "CPATH") + + ;; Tell 'libpthread' where to find 'libihash' on Hurd systems. + ,@(if (hurd-triplet? (%current-system)) + `((substitute* "libpthread/Makefile" + (("LDLIBS-pthread.so =.*") + (string-append "LDLIBS-pthread.so = " + (assoc-ref %build-inputs "kernel-headers") + "/lib/libihash.a\n")))) + '()) + + ;; 'rpcgen' needs native libc headers to be built. + (substitute* "sunrpc/Makefile" + (("sunrpc-CPPFLAGS =.*" all) + (string-append "CPATH = $(NATIVE_CPATH)\n" + "export CPATH\n" + all "\n"))) + #t))))))) (propagated-inputs `(("kernel-headers" ,(kernel-headers-boot0)))) (native-inputs `(("texinfo" ,texinfo-boot0) diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm index 86efe2a40e..e95b2a3d27 100644 --- a/gnu/packages/compression.scm +++ b/gnu/packages/compression.scm @@ -200,14 +200,14 @@ adding and extracting files to/from a tar archive.") (define-public gzip (package (name "gzip") - (version "1.8") + (version "1.9") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/gzip/gzip-" version ".tar.xz")) (sha256 (base32 - "1lxv3p4iyx7833mlihkn5wfwmz4cys5nybwpz3dfawag8kn6f5zz")))) + "16h8g4acy7fgfxcjacr3wijjsnixwsfd2jhz3zwdi2qrzi262l5f")))) (build-system gnu-build-system) (synopsis "General file (de)compression (using lzw)") (arguments @@ -272,11 +272,9 @@ file; as a result, it is often used in conjunction with \"tar\", resulting in (let* ((out (assoc-ref outputs "out")) (libdir (string-append out "/lib"))) (for-each (lambda (file) - (let ((base (basename file))) - (format #t "installing `~a' to `~a'~%" - base libdir) - (copy-file file - (string-append libdir "/" base)))) + (format #t "installing `~a' to `~a'~%" + (basename file) libdir) + (install-file file libdir)) (find-files "." "^libbz2\\.so"))) #t)) (add-after 'install-shared-lib 'patch-scripts @@ -475,14 +473,14 @@ some compression ratio).") (define-public lzip (package (name "lzip") - (version "1.19") + (version "1.20") (source (origin (method url-fetch) (uri (string-append "mirror://savannah/lzip/lzip-" version ".tar.gz")) (sha256 (base32 - "1abbch762gv8rjr579q3qyyk6c80plklbv2mw4x0vg71dgsw9bgz")))) + "0319q59kb8g324wnj7xzbr7vvlx5bcs13lr34j0zb3kqlyjq2fy9")))) (build-system gnu-build-system) (home-page "https://www.nongnu.org/lzip/lzip.html") (synopsis "Lossless data compressor based on the LZMA algorithm") diff --git a/gnu/packages/cross-base.scm b/gnu/packages/cross-base.scm index 0f5997951c..8dede7791f 100644 --- a/gnu/packages/cross-base.scm +++ b/gnu/packages/cross-base.scm @@ -3,6 +3,7 @@ ;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2016 Manolis Fragkiskos Ragkousis <manolis837@gmail.com> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -314,14 +315,14 @@ target that libc." `(#:modules ((guix build gnu-build-system) (guix build utils) (srfi srfi-26)) - #:phases (alist-cons-before - 'configure 'set-cross-headers-path - (lambda* (#:key inputs #:allow-other-keys) - (let* ((mach (assoc-ref inputs "cross-gnumach-headers")) - (cpath (string-append mach "/include"))) - (for-each (cut setenv <> cpath) - ',%gcc-cross-include-paths))) - %standard-phases) + #:phases (modify-phases %standard-phases + (add-before 'configure 'set-cross-headers-path + (lambda* (#:key inputs #:allow-other-keys) + (let* ((mach (assoc-ref inputs "cross-gnumach-headers")) + (cpath (string-append mach "/include"))) + (for-each (cut setenv <> cpath) + ',%gcc-cross-include-paths) + #t)))) #:configure-flags (list ,(string-append "--target=" target)) ,@(package-arguments mig))) @@ -352,16 +353,16 @@ target that libc." (srfi srfi-26)) ,@(package-arguments glibc/hurd-headers)) ((#:phases phases) - `(alist-cons-before - 'pre-configure 'set-cross-headers-path - (lambda* (#:key inputs #:allow-other-keys) - (let* ((mach (assoc-ref inputs "gnumach-headers")) - (hurd (assoc-ref inputs "hurd-headers")) - (cpath (string-append mach "/include:" - hurd "/include"))) - (for-each (cut setenv <> cpath) - ',%gcc-cross-include-paths))) - ,phases)))) + `(modify-phases ,phases + (add-before 'pre-configure 'set-cross-headers-path + (lambda* (#:key inputs #:allow-other-keys) + (let* ((mach (assoc-ref inputs "gnumach-headers")) + (hurd (assoc-ref inputs "hurd-headers")) + (cpath (string-append mach "/include:" + hurd "/include"))) + (for-each (cut setenv <> cpath) + ',%gcc-cross-include-paths) + #t))))))) (propagated-inputs `(("gnumach-headers" ,xgnumach-headers) ("hurd-headers" ,xhurd-headers))) @@ -382,14 +383,14 @@ target that libc." (srfi srfi-26)) ,@(package-arguments hurd-minimal)) ((#:phases phases) - `(alist-cons-before - 'configure 'set-cross-headers-path - (lambda* (#:key inputs #:allow-other-keys) - (let* ((glibc-headers (assoc-ref inputs "cross-glibc-hurd-headers")) - (cpath (string-append glibc-headers "/include"))) - (for-each (cut setenv <> cpath) - ',%gcc-cross-include-paths))) - ,phases)))) + `(modify-phases ,phases + (add-before 'configure 'set-cross-headers-path + (lambda* (#:key inputs #:allow-other-keys) + (let* ((glibc-headers (assoc-ref inputs "cross-glibc-hurd-headers")) + (cpath (string-append glibc-headers "/include"))) + (for-each (cut setenv <> cpath) + ',%gcc-cross-include-paths) + #t))))))) (inputs `(("cross-glibc-hurd-headers" ,xglibc/hurd-headers))) @@ -456,17 +457,16 @@ XBINUTILS and the cross tool chain." `(cons ,(string-append "--host=" target) ,flags)) ((#:phases phases) - `(alist-cons-before - 'configure 'set-cross-kernel-headers-path - (lambda* (#:key inputs #:allow-other-keys) - (let* ((kernel (assoc-ref inputs "kernel-headers")) - (cpath (string-append kernel "/include"))) - (for-each (cut setenv <> cpath) - ',%gcc-cross-include-paths) - (setenv "CROSS_LIBRARY_PATH" - (string-append kernel "/lib")) ;for Hurd's libihash - #t)) - ,phases)))) + `(modify-phases ,phases + (add-before 'configure 'set-cross-kernel-headers-path + (lambda* (#:key inputs #:allow-other-keys) + (let* ((kernel (assoc-ref inputs "kernel-headers")) + (cpath (string-append kernel "/include"))) + (for-each (cut setenv <> cpath) + ',%gcc-cross-include-paths) + (setenv "CROSS_LIBRARY_PATH" + (string-append kernel "/lib")) ; for Hurd's libihash + #t))))))) ;; Shadow the native "kernel-headers" because glibc's recipe expects the ;; "kernel-headers" input to point to the right thing. diff --git a/gnu/packages/crypto.scm b/gnu/packages/crypto.scm index 7716205947..1e447d4f3a 100644 --- a/gnu/packages/crypto.scm +++ b/gnu/packages/crypto.scm @@ -646,12 +646,7 @@ data on your platform, so the seed itself will be as random as possible. ;; fat only checks for Intel optimisations '("--enable-fat") '()) - "--disable-native") ; don't optimise at build time. - #:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (invoke "sh" "autogen.sh")))))) + "--disable-native"))) ;don't optimise at build time (home-page "https://blake2.net/") (synopsis "Library implementing the BLAKE2 family of hash functions") (description diff --git a/gnu/packages/cups.scm b/gnu/packages/cups.scm index 89c58f864b..e09fd04a30 100644 --- a/gnu/packages/cups.scm +++ b/gnu/packages/cups.scm @@ -50,7 +50,7 @@ (define-public cups-filters (package (name "cups-filters") - (version "1.17.9") + (version "1.20.1") (source(origin (method url-fetch) (uri @@ -58,7 +58,7 @@ "cups-filters-" version ".tar.xz")) (sha256 (base32 - "0i7mvvnq7ayhxn1ajci8h7l3cijzwr9d50p58h0rbsh9hf63zblq")) + "0qix1whz5n4ijnl6d44f1v8nzkpv99wqjyrby8vx6xnpskw5hsxk")) (modules '((guix build utils))) (snippet ;; install backends, banners and filters to cups-filters output diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index 87f65404f8..56531f50e3 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2012, 2013, 2014, 2015, 2016 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com> ;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org> @@ -159,14 +159,14 @@ either single machines or networked clusters.") (define-public gdbm (package (name "gdbm") - (version "1.13") + (version "1.14") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/gdbm/gdbm-" version ".tar.gz")) (sha256 (base32 - "0lx201q20dvc70f8a3c9s7s18z15inlxvbffph97ngvrgnyjq9cx")))) + "02dakgrq93xwgln8qfv3vs5jyz5yvds5nyzkx6rhg9v585x478dd")))) (arguments `(#:configure-flags '("--enable-libgdbm-compat"))) (build-system gnu-build-system) (home-page "http://www.gnu.org.ua/software/gdbm") @@ -1003,7 +1003,7 @@ for example from a shell script.") (define-public sqlite (package (name "sqlite") - (version "3.21.0") + (version "3.22.0") (source (origin (method url-fetch) (uri (let ((numeric-version @@ -1015,11 +1015,11 @@ for example from a shell script.") (map (cut string-pad <> 2 #\0) other-digits)) 6 #\0)))))) - (string-append "https://sqlite.org/2017/sqlite-autoconf-" + (string-append "https://sqlite.org/2018/sqlite-autoconf-" numeric-version ".tar.gz"))) (sha256 (base32 - "1qxvzdjwzw6k0kqjfabj86rnq87xdbwbca7laxxdhnh0fmkm3pfp")))) + "04n6hnw2g818d7r92cp2608kd5mhzyysy83k29kbq1mp709an918")))) (build-system gnu-build-system) (inputs `(("readline" ,readline))) (arguments @@ -1624,12 +1624,7 @@ trees (LSM), for sustained throughput under random insert workloads.") #:configure-flags (list (string-append "--with-libwiredtiger-prefix=" (assoc-ref %build-inputs "wiredtiger"))) - #:make-flags '("GUILE_AUTO_COMPILE=0") - #:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (invoke "sh" "bootstrap")))))) + #:make-flags '("GUILE_AUTO_COMPILE=0"))) ;; TODO: Remove microkanren.scm when we have a separate package ;; for it. (native-inputs diff --git a/gnu/packages/debug.scm b/gnu/packages/debug.scm index 112c656ff8..1f238637a4 100644 --- a/gnu/packages/debug.scm +++ b/gnu/packages/debug.scm @@ -299,10 +299,7 @@ down the road.") (which "sh")))))) (add-before 'configure 'repack-make (lambda _ - (zero? (system* "tar" "cJf" "./make.tar.xz" ,make-dir)))) - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi")))))))) + (zero? (system* "tar" "cJf" "./make.tar.xz" ,make-dir)))))))) (home-page "https://github.com/losalamos/stress-make") (synopsis "Expose race conditions in Makefiles") (description diff --git a/gnu/packages/docbook.scm b/gnu/packages/docbook.scm index d56dc49198..3034bc5493 100644 --- a/gnu/packages/docbook.scm +++ b/gnu/packages/docbook.scm @@ -236,19 +236,19 @@ by no means limited to these applications.) This package provides XML DTDs.") #:use-setuptools? #f #:tests? #f ;no 'test' command #:phases - (alist-cons-after - 'wrap 'set-path - (lambda* (#:key inputs outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out"))) - ;; dblatex executes helper programs at runtime. - (wrap-program (string-append out "/bin/dblatex") - `("PATH" ":" prefix - ,(map (lambda (input) - (string-append (assoc-ref inputs input) - "/bin")) - '("libxslt" "texlive" - "imagemagick" "inkscape")))))) - %standard-phases))) + (modify-phases %standard-phases + (add-after 'wrap 'set-path + (lambda* (#:key inputs outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + ;; dblatex executes helper programs at runtime. + (wrap-program (string-append out "/bin/dblatex") + `("PATH" ":" prefix + ,(map (lambda (input) + (string-append (assoc-ref inputs input) + "/bin")) + '("libxslt" "texlive" + "imagemagick" "inkscape")))) + #t)))))) (home-page "http://dblatex.sourceforge.net") (synopsis "DocBook to LaTeX Publishing") (description diff --git a/gnu/packages/documentation.scm b/gnu/packages/documentation.scm index eebd38243b..cde689c63d 100644 --- a/gnu/packages/documentation.scm +++ b/gnu/packages/documentation.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2014 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2014, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014, 2016 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2016 Roel Janssen <roel@gnu.org> @@ -59,9 +59,6 @@ `(#:tests? #f ; no 'check' target #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (invoke "autoconf"))) ;; Some XML-related binaries are required for asciidoc's proper usage. ;; Without these, asciidoc fails when parsing XML documents, either ;; reporting a missing "xmllint" binary or, when passed the diff --git a/gnu/packages/elf.scm b/gnu/packages/elf.scm index 8fb568b841..7ec189820d 100644 --- a/gnu/packages/elf.scm +++ b/gnu/packages/elf.scm @@ -127,14 +127,14 @@ Executable and Linkable Format (@dfn{ELF}). This includes @command{ld}, '())) (arguments (if (string-prefix? "arm" (or (%current-target-system) (%current-system))) - `(#:phases (alist-cons-after - 'unpack 'patch/rework-for-arm - (lambda* (#:key inputs #:allow-other-keys) - (let ((patch-file - (assoc-ref inputs "patch/rework-for-arm"))) - (zero? (system* "patch" "--force" "-p1" - "--input" patch-file)))) - %standard-phases)) + `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'patch/rework-for-arm + (lambda* (#:key inputs #:allow-other-keys) + (let ((patch-file + (assoc-ref inputs "patch/rework-for-arm"))) + (invoke "patch" "--force" "-p1" + "--input" patch-file) + #t))))) '())) (home-page "https://nixos.org/patchelf.html") diff --git a/gnu/packages/fontutils.scm b/gnu/packages/fontutils.scm index a5e8c79371..22382f745a 100644 --- a/gnu/packages/fontutils.scm +++ b/gnu/packages/fontutils.scm @@ -378,16 +378,15 @@ applications should be.") (define-public graphite2 (package (name "graphite2") - (version "1.3.10") + (version "1.3.11") (source (origin (method url-fetch) (uri (string-append "https://github.com/silnrsi/graphite/releases/" "download/" version "/" name "-" version ".tgz")) - (patches (search-patches "graphite2-ffloat-store.patch")) (sha256 (base32 - "1bm1rl2ww0m8rvmknh8fpajyz9xqv43qs9qrzf7xd5gaz6rf7zch")))) + "0z5dcgh8r3678awq6fb8igik7xmar5m6z9xxwpkkhradhk8jxfds")))) (build-system cmake-build-system) (native-inputs `(("python" ,python-2) ; because of "import imap" in tests @@ -495,11 +494,6 @@ smooth contours with constant curvature at the spline joins.") (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) ("libtool" ,libtool))) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-vi"))))))) (synopsis "Unicode names and annotation list") (description "LibUniNamesList holds www.unicode.org Nameslist.txt data which can be diff --git a/gnu/packages/ftp.scm b/gnu/packages/ftp.scm index 4ad6bcbf1b..5a79edf245 100644 --- a/gnu/packages/ftp.scm +++ b/gnu/packages/ftp.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2014, 2015 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2014, 2015, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2015 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016, 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr> @@ -156,11 +156,6 @@ FTP browser, as well as non-interactive commands such as 'ncftpput' and `(("automake" ,automake) ("autoconf" ,autoconf) ("gettext" ,gettext-minimal))) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-vfi"))))))) (home-page "http://weex.sourceforge.net/") (synopsis "Non-interactive client for FTP synchronization") (description diff --git a/gnu/packages/game-development.scm b/gnu/packages/game-development.scm index 03a70bea49..db13ac0eff 100644 --- a/gnu/packages/game-development.scm +++ b/gnu/packages/game-development.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2014 Tomáš Čech <sleep_walker@suse.cz> ;;; Copyright © 2015 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2015 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2015, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015 Alex Kost <alezost@gmail.com> ;;; Copyright © 2015, 2016, 2017 David Thompson <davet@gnu.org> ;;; Copyright © 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il> @@ -958,11 +958,6 @@ painted with a mouse.") (base32 "0w0pamjc3vj0jr718hysrw8x076fq6n9rd6wcb36sn2jd0lqvi98")))) (build-system gnu-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "sh" "bootstrap"))))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm index a33da03ad5..6d44d8d91e 100644 --- a/gnu/packages/games.scm +++ b/gnu/packages/games.scm @@ -5,7 +5,7 @@ ;;; Copyright © 2014, 2015, 2016, 2017 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2014 Cyrill Schenkel <cyrill.schenkel@gmail.com> ;;; Copyright © 2014 Sylvain Beucler <beuc@beuc.net> -;;; Copyright © 2014, 2015 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2014, 2015, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014, 2015, 2016 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2015, 2016 Andreas Enge <andreas@enge.fr> @@ -4634,8 +4634,6 @@ elements to achieve a simple goal in the most complex way possible.") (string-append "PIONEER_DATA_DIR=" %output "/share/games/pioneer")) #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "sh" "bootstrap")))) (add-before 'bootstrap 'fix-lua-check (lambda _ (substitute* "configure.ac" diff --git a/gnu/packages/gcc.scm b/gnu/packages/gcc.scm index 62b8968823..e9c83997ab 100644 --- a/gnu/packages/gcc.scm +++ b/gnu/packages/gcc.scm @@ -5,6 +5,7 @@ ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2015, 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Carlos Sánchez de La Lama <csanchezdll@gmail.com> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -200,131 +201,131 @@ where the OS part is overloaded to denote a specific ABI---into GCC #:tests? #f #:phases - (alist-cons-before - 'configure 'pre-configure - (lambda* (#:key inputs outputs #:allow-other-keys) - (let ((libdir ,(libdir)) - (libc (assoc-ref inputs "libc"))) - (when libc - ;; The following is not performed for `--without-headers' - ;; cross-compiler builds. - - ;; Join multi-line definitions of GLIBC_DYNAMIC_LINKER* into a - ;; single line, to allow the next step to work properly. - (for-each - (lambda (x) - (substitute* (find-files "gcc/config" - "^(linux|gnu|sysv4)(64|-elf|-eabi)?\\.h$") - (("(#define (GLIBC|GNU_USER)_DYNAMIC_LINKER.*)\\\\\n$" _ line) - line))) - '(1 2 3)) - - ;; Fix the dynamic linker's file name. - (substitute* (find-files "gcc/config" - "^(linux|gnu|sysv4)(64|-elf|-eabi)?\\.h$") - (("#define (GLIBC|GNU_USER)_DYNAMIC_LINKER([^ \t]*).*$" - _ gnu-user suffix) - (format #f "#define ~a_DYNAMIC_LINKER~a \"~a\"~%" - gnu-user suffix - (string-append libc ,(glibc-dynamic-linker))))) - - ;; Tell where to find libstdc++, libc, and `?crt*.o', except - ;; `crt{begin,end}.o', which come with GCC. - (substitute* (find-files "gcc/config" - "^gnu-user.*\\.h$") - (("#define GNU_USER_TARGET_LIB_SPEC (.*)$" _ suffix) - ;; Help libgcc_s.so be found (see also below.) Always use - ;; '-lgcc_s' so that libgcc_s.so is always found by those - ;; programs that use 'pthread_cancel' (glibc dlopens - ;; libgcc_s.so when pthread_cancel support is needed, but - ;; having it in the application's RUNPATH isn't enough; see - ;; <http://sourceware.org/ml/libc-help/2013-11/msg00023.html>.) - ;; - ;; NOTE: The '-lgcc_s' added below needs to be removed in a - ;; later phase of %gcc-static. If you change the string - ;; below, make sure to update the relevant code in - ;; %gcc-static package as needed. - (format #f "#define GNU_USER_TARGET_LIB_SPEC \ + (modify-phases %standard-phases + (add-before 'configure 'pre-configure + (lambda* (#:key inputs outputs #:allow-other-keys) + (let ((libdir ,(libdir)) + (libc (assoc-ref inputs "libc"))) + (when libc + ;; The following is not performed for `--without-headers' + ;; cross-compiler builds. + + ;; Join multi-line definitions of GLIBC_DYNAMIC_LINKER* into a + ;; single line, to allow the next step to work properly. + (for-each + (lambda (x) + (substitute* (find-files "gcc/config" + "^(linux|gnu|sysv4)(64|-elf|-eabi)?\\.h$") + (("(#define (GLIBC|GNU_USER)_DYNAMIC_LINKER.*)\\\\\n$" _ line) + line))) + '(1 2 3)) + + ;; Fix the dynamic linker's file name. + (substitute* (find-files "gcc/config" + "^(linux|gnu|sysv4)(64|-elf|-eabi)?\\.h$") + (("#define (GLIBC|GNU_USER)_DYNAMIC_LINKER([^ \t]*).*$" + _ gnu-user suffix) + (format #f "#define ~a_DYNAMIC_LINKER~a \"~a\"~%" + gnu-user suffix + (string-append libc ,(glibc-dynamic-linker))))) + + ;; Tell where to find libstdc++, libc, and `?crt*.o', except + ;; `crt{begin,end}.o', which come with GCC. + (substitute* (find-files "gcc/config" + "^gnu-user.*\\.h$") + (("#define GNU_USER_TARGET_LIB_SPEC (.*)$" _ suffix) + ;; Help libgcc_s.so be found (see also below.) Always use + ;; '-lgcc_s' so that libgcc_s.so is always found by those + ;; programs that use 'pthread_cancel' (glibc dlopens + ;; libgcc_s.so when pthread_cancel support is needed, but + ;; having it in the application's RUNPATH isn't enough; see + ;; <http://sourceware.org/ml/libc-help/2013-11/msg00023.html>.) + ;; + ;; NOTE: The '-lgcc_s' added below needs to be removed in a + ;; later phase of %gcc-static. If you change the string + ;; below, make sure to update the relevant code in + ;; %gcc-static package as needed. + (format #f "#define GNU_USER_TARGET_LIB_SPEC \ \"-L~a/lib %{!static:-rpath=~a/lib %{!static-libgcc:-rpath=~a/lib -lgcc_s}} \" ~a" - libc libc libdir suffix)) - (("#define GNU_USER_TARGET_STARTFILE_SPEC.*$" line) - (format #f "#define STANDARD_STARTFILE_PREFIX_1 \"~a/lib\" + libc libc libdir suffix)) + (("#define GNU_USER_TARGET_STARTFILE_SPEC.*$" line) + (format #f "#define STANDARD_STARTFILE_PREFIX_1 \"~a/lib\" #define STANDARD_STARTFILE_PREFIX_2 \"\" ~a" - libc line))) - - ;; The rs6000 (a.k.a. powerpc) config in GCC does not use - ;; GNU_USER_* defines. Do the above for this case. - (substitute* - "gcc/config/rs6000/sysv4.h" - (("#define LIB_LINUX_SPEC (.*)$" _ suffix) - (format #f "#define LIB_LINUX_SPEC \ + libc line))) + + ;; The rs6000 (a.k.a. powerpc) config in GCC does not use + ;; GNU_USER_* defines. Do the above for this case. + (substitute* + "gcc/config/rs6000/sysv4.h" + (("#define LIB_LINUX_SPEC (.*)$" _ suffix) + (format #f "#define LIB_LINUX_SPEC \ \"-L~a/lib %{!static:-rpath=~a/lib %{!static-libgcc:-rpath=~a/lib -lgcc_s}} \" ~a" - libc libc libdir suffix)) - (("#define STARTFILE_LINUX_SPEC.*$" line) - (format #f "#define STANDARD_STARTFILE_PREFIX_1 \"~a/lib\" + libc libc libdir suffix)) + (("#define STARTFILE_LINUX_SPEC.*$" line) + (format #f "#define STANDARD_STARTFILE_PREFIX_1 \"~a/lib\" #define STANDARD_STARTFILE_PREFIX_2 \"\" ~a" - libc line)))) - - ;; Don't retain a dependency on the build-time sed. - (substitute* "fixincludes/fixincl.x" - (("static char const sed_cmd_z\\[\\] =.*;") - "static char const sed_cmd_z[] = \"sed\";")) - - ;; Aarch64 support didn't land in GCC until the 4.8 series. - (when (file-exists? "gcc/config/aarch64") - ;; Force Aarch64 libdir to be /lib and not /lib64 - (substitute* "gcc/config/aarch64/t-aarch64-linux" - (("lib64") "lib"))) - - (when (file-exists? "libbacktrace") - ;; GCC 4.8+ comes with libbacktrace. By default it builds - ;; with -Werror, which fails with a -Wcast-qual error in glibc - ;; 2.21's stdlib-bsearch.h. Remove -Werror. - (substitute* "libbacktrace/configure" - (("WARN_FLAGS=(.*)-Werror" _ flags) - (string-append "WARN_FLAGS=" flags))) - - (when (file-exists? "libsanitizer/libbacktrace") - ;; Same in libsanitizer's bundled copy (!) found in 4.9+. - (substitute* "libsanitizer/libbacktrace/Makefile.in" - (("-Werror") - "")))) - - ;; Add a RUNPATH to libstdc++.so so that it finds libgcc_s. - ;; See <https://gcc.gnu.org/bugzilla/show_bug.cgi?id=32354> - ;; and <http://bugs.gnu.org/20358>. - (substitute* "libstdc++-v3/src/Makefile.in" - (("^OPT_LDFLAGS = ") - "OPT_LDFLAGS = -Wl,-rpath=$(libdir) ")) - - ;; Move libstdc++*-gdb.py to the "lib" output to avoid a - ;; circularity between "out" and "lib". (Note: - ;; --with-python-dir is useless because it imposes $(prefix) as - ;; the parent directory.) - (substitute* "libstdc++-v3/python/Makefile.in" - (("pythondir = .*$") - (string-append "pythondir = " libdir "/share" - "/gcc-$(gcc_version)/python\n"))) - - ;; Avoid another circularity between the outputs: this #define - ;; ends up in auto-host.h in the "lib" output, referring to - ;; "out". (This variable is used to augment cpp's search path, - ;; but there's nothing useful to look for here.) - (substitute* "gcc/config.in" - (("PREFIX_INCLUDE_DIR") - "PREFIX_INCLUDE_DIR_isnt_necessary_here")))) - - (alist-cons-after - 'configure 'post-configure - (lambda _ - ;; Don't store configure flags, to avoid retaining references to - ;; build-time dependencies---e.g., `--with-ppl=/gnu/store/xxx'. - (substitute* "Makefile" - (("^TOPLEVEL_CONFIGURE_ARGUMENTS=(.*)$" _ rest) - "TOPLEVEL_CONFIGURE_ARGUMENTS=\n"))) - %standard-phases)))) + libc line)))) + + ;; Don't retain a dependency on the build-time sed. + (substitute* "fixincludes/fixincl.x" + (("static char const sed_cmd_z\\[\\] =.*;") + "static char const sed_cmd_z[] = \"sed\";")) + + ;; Aarch64 support didn't land in GCC until the 4.8 series. + (when (file-exists? "gcc/config/aarch64") + ;; Force Aarch64 libdir to be /lib and not /lib64 + (substitute* "gcc/config/aarch64/t-aarch64-linux" + (("lib64") "lib"))) + + (when (file-exists? "libbacktrace") + ;; GCC 4.8+ comes with libbacktrace. By default it builds + ;; with -Werror, which fails with a -Wcast-qual error in glibc + ;; 2.21's stdlib-bsearch.h. Remove -Werror. + (substitute* "libbacktrace/configure" + (("WARN_FLAGS=(.*)-Werror" _ flags) + (string-append "WARN_FLAGS=" flags))) + + (when (file-exists? "libsanitizer/libbacktrace") + ;; Same in libsanitizer's bundled copy (!) found in 4.9+. + (substitute* "libsanitizer/libbacktrace/Makefile.in" + (("-Werror") + "")))) + + ;; Add a RUNPATH to libstdc++.so so that it finds libgcc_s. + ;; See <https://gcc.gnu.org/bugzilla/show_bug.cgi?id=32354> + ;; and <http://bugs.gnu.org/20358>. + (substitute* "libstdc++-v3/src/Makefile.in" + (("^OPT_LDFLAGS = ") + "OPT_LDFLAGS = -Wl,-rpath=$(libdir) ")) + + ;; Move libstdc++*-gdb.py to the "lib" output to avoid a + ;; circularity between "out" and "lib". (Note: + ;; --with-python-dir is useless because it imposes $(prefix) as + ;; the parent directory.) + (substitute* "libstdc++-v3/python/Makefile.in" + (("pythondir = .*$") + (string-append "pythondir = " libdir "/share" + "/gcc-$(gcc_version)/python\n"))) + + ;; Avoid another circularity between the outputs: this #define + ;; ends up in auto-host.h in the "lib" output, referring to + ;; "out". (This variable is used to augment cpp's search path, + ;; but there's nothing useful to look for here.) + (substitute* "gcc/config.in" + (("PREFIX_INCLUDE_DIR") + "PREFIX_INCLUDE_DIR_isnt_necessary_here")) + #t))) + + (add-after 'configure 'post-configure + (lambda _ + ;; Don't store configure flags, to avoid retaining references to + ;; build-time dependencies---e.g., `--with-ppl=/gnu/store/xxx'. + (substitute* "Makefile" + (("^TOPLEVEL_CONFIGURE_ARGUMENTS=(.*)$" _ rest) + "TOPLEVEL_CONFIGURE_ARGUMENTS=\n")) + #t))))) (native-search-paths ;; Use the language-specific variables rather than 'CPATH' because they diff --git a/gnu/packages/ghostscript.scm b/gnu/packages/ghostscript.scm index 6d2dd4c008..345ac76317 100644 --- a/gnu/packages/ghostscript.scm +++ b/gnu/packages/ghostscript.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com> ;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2017 Leo Famulari <leo@famulari.name> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -43,14 +44,13 @@ (define-public lcms (package (name "lcms") - (version "2.8") + (version "2.9") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/lcms/lcms/" version "/lcms2-" version ".tar.gz")) - (patches (search-patches "lcms-CVE-2016-10165.patch")) (sha256 (base32 - "08pvl289g0mbznzx5l6ibhaldsgx41kwvdn2c974ga9fkli2pl36")))) + "083xisy6z01zhm7p7rgk4bx9d6zlr8l20qkfv1g29ylnhgwzvij8")))) (build-system gnu-build-system) (inputs `(("libjpeg-8" ,libjpeg-8) ("libtiff" ,libtiff) diff --git a/gnu/packages/glib.scm b/gnu/packages/glib.scm index 30a22d7d59..34968f9d91 100644 --- a/gnu/packages/glib.scm +++ b/gnu/packages/glib.scm @@ -78,7 +78,7 @@ (define dbus (package (name "dbus") - (version "1.12.2") + (version "1.12.6") (source (origin (method url-fetch) (uri (string-append @@ -86,7 +86,7 @@ version ".tar.gz")) (sha256 (base32 - "121xm3cy48vbv6nv522lfkk4zyiqc1g6v4lb3344gc3h2w4vaar7")) + "05picaq8j60wlwyi84qvw5liw3nd0cws9va3krnc3pms0wm906v2")) (patches (search-patches "dbus-helper-search-path.patch")))) (build-system gnu-build-system) (arguments @@ -148,7 +148,7 @@ shared NFS home directories.") (define glib (package (name "glib") - (version "2.54.2") + (version "2.54.3") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" @@ -156,7 +156,7 @@ shared NFS home directories.") name "-" version ".tar.xz")) (sha256 (base32 - "0v4ffl172kbqgxrhgxyafhpw36bq3iklb2zjqyl6jcfkmb2yb2dv")) + "1a60p9m493mvm42rskg8ifr0jmsbr8arzyqx73jshgfwhmkdqgwn")) (patches (search-patches "glib-respect-datadir.patch" "glib-tests-timer.patch")))) (build-system gnu-build-system) @@ -369,13 +369,14 @@ bindings to call into the C library.") ("perl-xml-parser" ,perl-xml-parser) ("perl" ,perl))) (arguments - `(#:phases (alist-cons-after - 'unpack 'patch-file-references - (lambda* (#:key inputs #:allow-other-keys) - (let ((file (assoc-ref inputs "file"))) - (substitute* "intltool-update.in" - (("`file") (string-append "`" file "/bin/file"))))) - %standard-phases))) + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch-file-references + (lambda* (#:key inputs #:allow-other-keys) + (let ((file (assoc-ref inputs "file"))) + (substitute* "intltool-update.in" + (("`file") (string-append "`" file "/bin/file"))) + #t)))))) (home-page "https://launchpad.net/intltool/+download") (synopsis "Tools to centralise translations of different file formats") (description diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm index 56ee1aa885..a4ace442e8 100644 --- a/gnu/packages/gnome.scm +++ b/gnu/packages/gnome.scm @@ -2111,7 +2111,7 @@ editors, IDEs, etc.") (arguments `(#:configure-flags '("CXXFLAGS=-Wformat=0") #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ (setenv "NOCONFIGURE" "true") (zero? (system* "sh" "autogen.sh"))))))) @@ -6019,7 +6019,7 @@ documents and diagrams, playing media, scanning, and much more.") (arguments '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ ;; The build system cleverly detects that we're not building from ;; a release tarball and turns on -Werror for GCC. @@ -6352,12 +6352,6 @@ functionality and behavior.") (base32 "0igxpngnkf1wpsg872a9jg3c9f5z8afm312yfbillz16mk8w39cw")))) (build-system gnu-build-system) - (arguments - '(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vif"))))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) @@ -6394,10 +6388,7 @@ like GNOME, Unity, Budgie, Pantheon, XFCE, Mate, etc.") (substitute* '("Makefile.am") (("\\$\\(DESTDIR\\)/usr/share") "$(datadir)")) - #t)) - (add-after 'patch-makefile.am 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vif"))))))) + #t))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake))) @@ -6446,12 +6437,6 @@ simple and consistent.") (base32 "1ya1cqvv8q847c0rpcg6apzky87q3h04y8jz5nmi52qk6kg8si0b")))) (build-system gnu-build-system) - (arguments - '(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vif"))))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake))) diff --git a/gnu/packages/gnunet.scm b/gnu/packages/gnunet.scm index f4eacd3023..ac7f8ab85f 100644 --- a/gnu/packages/gnunet.scm +++ b/gnu/packages/gnunet.scm @@ -321,11 +321,6 @@ kinds of basic applications for the foundation of a GNU internet.") (base32 "0k6mn28isjlxrnvbnblab3nh2xqx1b7san8k98kc35ap9lq0iz8w")))) (build-system gnu-build-system) - (arguments - '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (invoke "autoreconf" "-vfi")))))) (native-inputs `(("pkg-config" ,pkg-config) ("autoconf" ,autoconf-wrapper) ("automake" ,automake))) diff --git a/gnu/packages/gnupg.scm b/gnu/packages/gnupg.scm index 2696e332de..cb0651d626 100644 --- a/gnu/packages/gnupg.scm +++ b/gnu/packages/gnupg.scm @@ -92,14 +92,14 @@ Daemon and possibly more in the future.") (define-public libgcrypt (package (name "libgcrypt") - (version "1.8.1") + (version "1.8.2") (source (origin (method url-fetch) (uri (string-append "mirror://gnupg/libgcrypt/libgcrypt-" version ".tar.bz2")) (sha256 (base32 - "1cvqd9jk5qshbh48yh3ixw4zyr4n5k50r3475rrh20xfn7w7aa3s")))) + "01sca9m8hm6b5v8hmqsfdjhyz013869p1f0fxw9ln52qfnp4q1n8")))) (build-system gnu-build-system) (propagated-inputs `(("libgpg-error-host" ,libgpg-error))) diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm index 2fefb41c0a..5f236498b8 100644 --- a/gnu/packages/graphviz.scm +++ b/gnu/packages/graphviz.scm @@ -3,7 +3,7 @@ ;;; Copyright © 2015 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Theodoros Foradis <theodoros@foradis.org> ;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net> -;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Gábor Boskovits <boskovits@gmail.com> ;;; ;;; This file is part of GNU Guix. @@ -148,11 +148,12 @@ visualization tool suite.") "07mqx09jxh8cv9753y2d2jsv7wp8vjmrd7zcfpbrddz3wc9kx705")))) (build-system gnu-build-system) (arguments - '(#:phases (alist-cons-before - 'check 'pre-check - (lambda _ - (chmod "test/boolean/test.sh" #o777)) - %standard-phases) + '(#:phases + (modify-phases %standard-phases + (add-before 'check 'pre-check + (lambda _ + (chmod "test/boolean/test.sh" #o777) + #t))) ;; Some data files used by the test suite are missing. ;; See <http://sourceforge.net/p/gts/bugs/41/>. diff --git a/gnu/packages/gtk.scm b/gnu/packages/gtk.scm index 0e98a7c9d5..aeca806ee6 100644 --- a/gnu/packages/gtk.scm +++ b/gnu/packages/gtk.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> -;;; Copyright © 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014, 2015, 2017 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2015 Federico Beffa <beffa@fbengineering.ch> @@ -55,6 +55,7 @@ #:use-module (gnu packages enchant) #:use-module (gnu packages fontutils) #:use-module (gnu packages freedesktop) + #:use-module (gnu packages fribidi) #:use-module (gnu packages gettext) #:use-module (gnu packages ghostscript) #:use-module (gnu packages gl) @@ -175,7 +176,7 @@ affine transformation (scale, rotation, shear, etc.).") (define-public harfbuzz (package (name "harfbuzz") - (version "1.7.3") + (version "1.7.6") (source (origin (method url-fetch) (uri (string-append "https://www.freedesktop.org/software/" @@ -183,7 +184,7 @@ affine transformation (scale, rotation, shear, etc.).") version ".tar.bz2")) (sha256 (base32 - "1zh5n3q3mb6y6kr5m7zz1ags9z1vjwai57d6warx8qhzfrwn8lyd")))) + "16rf7qwgy1gza74v2ws79zdwwb1lpvgz2abwwm8ws9j82cwysyys")))) (build-system gnu-build-system) (outputs '("out" "bin")) ; 160K, only hb-view depend on cairo @@ -197,7 +198,8 @@ affine transformation (scale, rotation, shear, etc.).") (native-inputs `(("gobject-introspection" ,gobject-introspection) ("pkg-config" ,pkg-config) - ("python" ,python-2))) ; incompatible with Python 3 (print syntax) + ("python" ,python-wrapper) + ("which" ,which))) (arguments `(#:configure-flags `("--with-graphite2" "--with-gobject" @@ -213,7 +215,7 @@ affine transformation (scale, rotation, shear, etc.).") (define-public pango (package (name "pango") - (version "1.40.14") + (version "1.41.1") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/pango/" @@ -221,13 +223,14 @@ affine transformation (scale, rotation, shear, etc.).") name "-" version ".tar.xz")) (sha256 (base32 - "1qqpd8x1pl483ynj3mc5q4n8y2pxqhg2bv19vd94r7mzlzm1pbwh")))) + "1hxbwb9aak6m85i4kimsgq46nd3b68r6432xjna94a97ab7s8lqk")))) (build-system gnu-build-system) (propagated-inputs `(("cairo" ,cairo) ("harfbuzz" ,harfbuzz))) (inputs - `(("zlib" ,zlib) + `(("fribidi" ,fribidi) + ("zlib" ,zlib) ;; Some packages, such as Openbox, expect Pango to be built with the ;; optional libxft support. @@ -844,11 +847,6 @@ exceptions, macros, and a dynamic programming environment.") "/share/guile/site/@GUILE_EFFECTIVE_VERSION@"))) (file-name (string-append name "-" version ".tar.gz")))) (build-system gnu-build-system) - (arguments - `(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi"))))))) (native-inputs `(("pkg-config" ,pkg-config) ("autoconf" ,autoconf) ("automake" ,automake) diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm index 1e8aca1acf..7f01441b0e 100644 --- a/gnu/packages/guile.scm +++ b/gnu/packages/guile.scm @@ -15,7 +15,7 @@ ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com> ;;; Copyright © 2017 Theodoros Foradis <theodoros@foradis.org> ;;; Copyright © 2017 ng0 <ng0@infotropique.org> -;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; ;;; This file is part of GNU Guix. @@ -183,23 +183,24 @@ without requiring the source code to be rewritten.") (outputs '("out" "debug")) (arguments - `(#:configure-flags '("--disable-static") ;saves 3MiB - #:phases (alist-cons-before - 'configure 'pre-configure - (lambda* (#:key inputs #:allow-other-keys) - ;; Tell (ice-9 popen) the file name of Bash. - (let ((bash (assoc-ref inputs "bash"))) - (substitute* "module/ice-9/popen.scm" - ;; If bash is #f allow fallback for user to provide - ;; "bash" in PATH. This happens when cross-building to - ;; MinGW for which we do not have Bash yet. - (("/bin/sh") - ,@(if (target-mingw?) - '((if bash - (string-append bash "/bin/bash") - "bash")) - '((string-append bash "/bin/bash"))))))) - %standard-phases))) + `(#:configure-flags '("--disable-static") ; saves 3 MiB + #:phases + (modify-phases %standard-phases + (add-before 'configure 'pre-configure + (lambda* (#:key inputs #:allow-other-keys) + ;; Tell (ice-9 popen) the file name of Bash. + (let ((bash (assoc-ref inputs "bash"))) + (substitute* "module/ice-9/popen.scm" + ;; If bash is #f allow fallback for user to provide + ;; "bash" in PATH. This happens when cross-building to + ;; MinGW for which we do not have Bash yet. + (("/bin/sh") + ,@(if (target-mingw?) + '((if bash + (string-append bash "/bin/bash") + "bash")) + '((string-append bash "/bin/bash"))))) + #t)))))) (native-search-paths (list (search-path-specification @@ -725,9 +726,6 @@ format is also supported.") (("guile/site/2.0") "guile/site/2.2")) #t)) - (add-after 'use-guile-2.2 'bootstrap - (lambda _ - (invoke "autoreconf" "-vfi"))) (add-after 'install 'wrap-mcron (lambda* (#:key outputs #:allow-other-keys) ;; Wrap the 'mcron' command to refer to the right @@ -1841,12 +1839,7 @@ dictionary and suggesting spelling corrections.") (file-name (string-append name "-" version "-checkout")))) (build-system gnu-build-system) (arguments - '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "sh" "bootstrap"))))) - - #:configure-flags + '(#:configure-flags ;; Add -I to match 'bash.pc' of Bash 4.4. (list (string-append "CPPFLAGS=-I" (assoc-ref %build-inputs "bash:include") @@ -1976,10 +1969,6 @@ is not available for Guile 2.0.") (build-system gnu-build-system) (arguments `(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi")))) - ;; FIXME: On i686, bytestructures miscalculates the offset ;; of the 'old-file' and 'new-file' fields within the ;; '%diff-delta' structure. @@ -2028,8 +2017,8 @@ manipulate repositories of the Git version control system.") `(("pkg-config" ,pkg-config))) (inputs `(("guile" ,guile-2.2))) - (synopsis "General-purpose syntax highlighter for GNU Guile") - (description "Guile-syntax-highlight is a general-purpose syntax + (synopsis "General-purpose syntax highlighter for GNU Guile") + (description "Guile-syntax-highlight is a general-purpose syntax highlighting library for GNU Guile. It can parse code written in various programming languages into a simple s-expression that can be converted to HTML (via SXML) or any other format for rendering.") @@ -2048,11 +2037,6 @@ HTML (via SXML) or any other format for rendering.") (base32 "1mzmapln79vv10qxaggz9qwcdbag3jnrj19xx8bgkmxss8h03sv3")))) (build-system gnu-build-system) - (arguments - '(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "sh" "bootstrap.sh"))))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) diff --git a/gnu/packages/indent.scm b/gnu/packages/indent.scm index 4950a26121..3465d63c01 100644 --- a/gnu/packages/indent.scm +++ b/gnu/packages/indent.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -36,15 +37,16 @@ "0f9655vqdvfwbxvs1gpa7py8k1z71aqh8hp73f65vazwbfz436wa")))) (build-system gnu-build-system) (arguments - `(#:phases (alist-cons-after - 'unpack 'fix-docdir - (lambda _ - ;; Although indent uses a modern autoconf in which docdir - ;; defaults to PREFIX/share/doc, the doc/Makefile.am - ;; overrides this to be in PREFIX/doc. Fix this. - (substitute* "doc/Makefile.in" - (("^docdir = .*$") "docdir = @docdir@\n"))) - %standard-phases))) + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-docdir + (lambda _ + ;; Although indent uses a modern autoconf in which docdir + ;; defaults to PREFIX/share/doc, the doc/Makefile.am + ;; overrides this to be in PREFIX/doc. Fix this. + (substitute* "doc/Makefile.in" + (("^docdir = .*$") "docdir = @docdir@\n")) + #t))))) (synopsis "Code reformatter") (description "Indent is a program that makes source code easier to read by diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm index 521293da48..b4f64e2c2e 100644 --- a/gnu/packages/java.scm +++ b/gnu/packages/java.scm @@ -694,9 +694,6 @@ the standard javac executable. The tool runs on JamVM instead of SableVM."))) "--disable-gjdoc") #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vif")))) (add-after 'unpack 'remove-unsupported-annotations (lambda _ (substitute* (find-files "java" "\\.java$") diff --git a/gnu/packages/kodi.scm b/gnu/packages/kodi.scm index ad66a846d4..6f8571d22a 100644 --- a/gnu/packages/kodi.scm +++ b/gnu/packages/kodi.scm @@ -146,8 +146,6 @@ generator library for C++.") '(#:tests? #f #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-vif")))) (delete 'configure) (delete 'build) (replace 'install @@ -183,8 +181,6 @@ generator library for C++.") '(#:tests? #f #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-vif")))) (delete 'configure) (delete 'build) (replace 'install @@ -220,8 +216,6 @@ generator library for C++.") '(#:tests? #f #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-vif")))) (delete 'configure) (delete 'build) (replace 'install diff --git a/gnu/packages/less.scm b/gnu/packages/less.scm index 0aa4665840..2827951280 100644 --- a/gnu/packages/less.scm +++ b/gnu/packages/less.scm @@ -26,7 +26,7 @@ (define-public less (package (name "less") - (version "487") + (version "530") (source (origin (method url-fetch) @@ -34,7 +34,7 @@ version ".tar.gz")) (sha256 (base32 - "01i7n6jaxwmww3pasy3hg38zc6x7jw0w05mqqvh6caqbrdaq9p7k")))) + "1qpj2z38c53qmvqn8jaa0kq26q989cfbfjj4y0s6z17l1amr2gsh")))) (build-system gnu-build-system) (inputs `(("ncurses" ,ncurses))) (home-page "https://www.gnu.org/software/less/") diff --git a/gnu/packages/libbsd.scm b/gnu/packages/libbsd.scm index 3bfa2a3fec..58b0be872c 100644 --- a/gnu/packages/libbsd.scm +++ b/gnu/packages/libbsd.scm @@ -25,14 +25,14 @@ (define-public libbsd (package (name "libbsd") - (version "0.8.3") + (version "0.8.7") (source (origin (method url-fetch) (uri (string-append "https://libbsd.freedesktop.org/releases/" "libbsd-" version ".tar.xz")) (sha256 (base32 - "1a1l7afchlvvj2zfi7ajcg26bbkh5i98y2v5h9j5p1px9m7n6jwk")))) + "0c9bl49zs0xdddcwj5dh0lay9sxi2m1yi74848g8p87mb87g2j7m")))) (build-system gnu-build-system) (synopsis "Utility functions from BSD systems") (description "This library provides useful functions commonly found on BSD diff --git a/gnu/packages/libevent.scm b/gnu/packages/libevent.scm index d6b70a4f17..983c8625e4 100644 --- a/gnu/packages/libevent.scm +++ b/gnu/packages/libevent.scm @@ -121,14 +121,14 @@ limited support for fork events.") (define-public libuv (package (name "libuv") - (version "1.18.0") + (version "1.19.2") (source (origin (method url-fetch) (uri (string-append "https://dist.libuv.org/dist/v" version "/libuv-v" version ".tar.gz")) (sha256 (base32 - "125bzmzc32m52hd9iv8jvjlc7r3gadxgvp31a2fz2wlil16p7r2l")))) + "1msk9ac1z69whww88ibrwjqkd1apdla6l77cm2fwy5kigq0z5g3w")))) (build-system gnu-build-system) (arguments '(#:phases (modify-phases %standard-phases @@ -136,7 +136,7 @@ limited support for fork events.") (lambda _ ;; Fashionable people don't run 'make dist' these days, so ;; we need to do that ourselves. - (zero? (system* "sh" "autogen.sh"))))) + (invoke "sh" "autogen.sh")))) ;; XXX: Some tests want /dev/tty, attempt to make connections, etc. #:tests? #f)) diff --git a/gnu/packages/libffi.scm b/gnu/packages/libffi.scm index dd6b2237f9..8515edf925 100644 --- a/gnu/packages/libffi.scm +++ b/gnu/packages/libffi.scm @@ -36,29 +36,28 @@ #:use-module (guix build-system ruby)) (define-public libffi - (let ((post-install-phase - ;; Keep headers where libffi.pc expects them, but also make them - ;; available in $includedir where some users expect them. - '(lambda* (#:key outputs #:allow-other-keys) - (define out (assoc-ref outputs "out")) - (symlink (string-append out "/lib/libffi-3.2.1/include") - (string-append out "/include"))))) - (package + (package (name "libffi") (version "3.2.1") (source (origin - (method url-fetch) - (uri - (string-append "ftp://sourceware.org/pub/libffi/" - name "-" version ".tar.gz")) - (sha256 - (base32 - "0dya49bnhianl0r65m65xndz6ls2jn1xngyn72gd28ls3n7bnvnh")) - (patches (search-patches "libffi-3.2.1-complex-alpha.patch")))) + (method url-fetch) + (uri + (string-append "ftp://sourceware.org/pub/libffi/" + name "-" version ".tar.gz")) + (sha256 + (base32 + "0dya49bnhianl0r65m65xndz6ls2jn1xngyn72gd28ls3n7bnvnh")) + (patches (search-patches "libffi-3.2.1-complex-alpha.patch")))) (build-system gnu-build-system) - (arguments `(#:phases (alist-cons-after 'install 'post-install - ,post-install-phase - %standard-phases))) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'install 'post-install + (lambda* (#:key outputs #:allow-other-keys) + (define out (assoc-ref outputs "out")) + (symlink (string-append out "/lib/libffi-3.2.1/include") + (string-append out "/include")) + #t))))) (outputs '("out" "debug")) (synopsis "Foreign function call interface library") (description @@ -75,7 +74,7 @@ conversions for values passed between the two languages.") (home-page "http://sources.redhat.com/libffi/") ;; See <https://github.com/atgreen/libffi/blob/master/LICENSE>. - (license expat)))) + (license expat))) (define-public python-cffi (package diff --git a/gnu/packages/libreoffice.scm b/gnu/packages/libreoffice.scm index 316602adbc..7a1a1433fd 100644 --- a/gnu/packages/libreoffice.scm +++ b/gnu/packages/libreoffice.scm @@ -6,7 +6,7 @@ ;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be> ;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Andy Wingo <wingo@igalia.com> -;;; Copyright © 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2017, 2018 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com> ;;; @@ -705,12 +705,6 @@ Zoner Draw version 4 and 5.") ("libtool" ,libtool))) (inputs `(("perl" ,perl))) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi"))))))) (native-search-paths (list (search-path-specification (variable "DICPATH") (files '("share/hunspell"))))) diff --git a/gnu/packages/libsigsegv.scm b/gnu/packages/libsigsegv.scm index 2a44819820..7f63bb26c4 100644 --- a/gnu/packages/libsigsegv.scm +++ b/gnu/packages/libsigsegv.scm @@ -26,14 +26,14 @@ (define-public libsigsegv (package (name "libsigsegv") - (version "2.11") + (version "2.12") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/libsigsegv/libsigsegv-" version ".tar.gz")) (sha256 - (base32 "063swdvq7mbmc1clv0rnh20grwln1zfc2qnm0sa1hivcxyr2wz6x")))) + (base32 "1dlhqf4igzpqayms25lkhycjq1ccavisx8cnb3y4zapbkqsszq9s")))) (build-system gnu-build-system) (home-page "https://www.gnu.org/software/libsigsegv/") (synopsis "Library for handling page faults") diff --git a/gnu/packages/libunistring.scm b/gnu/packages/libunistring.scm index 1d421fb17d..6a3afd4f05 100644 --- a/gnu/packages/libunistring.scm +++ b/gnu/packages/libunistring.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012, 2013, 2014 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2018 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com> ;;; Copyright © 2017 Eric Bavier <bavier@member.fsf.org> @@ -32,7 +32,7 @@ (define-public libunistring (package (name "libunistring") - (version "0.9.8") + (version "0.9.9") (source (origin (method url-fetch) (uri (string-append @@ -40,7 +40,7 @@ version ".tar.xz")) (sha256 (base32 - "101gjj9q39pjlcaixylya6is5i7vlbnxr1w5w6raqvvhab7ki4vv")) + "0cx8v6862w7vvacbkcvg49kfx731ckdgaybmzw1zav71zkn97nd4")) (modules '((guix build utils))) (snippet '(begin diff --git a/gnu/packages/libusb.scm b/gnu/packages/libusb.scm index e5a63803d8..7981a4f5cc 100644 --- a/gnu/packages/libusb.scm +++ b/gnu/packages/libusb.scm @@ -331,12 +331,6 @@ devices.") (base32 "0qdgyj9rgb7n0nk3ghfswrhzzknxqn4ibn3wj8g4r828pw07451w")))) (build-system gnu-build-system) - (arguments - '(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi"))))))) (inputs `(("libusb" ,libusb) ("udev" ,eudev))) diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index b81cb55d6b..c3bd73023d 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2012 Nikita Karetnikov <nikita@karetnikov.org> ;;; Copyright © 2014, 2015, 2016, 2017, 2018 Mark H Weaver <mhw@netris.org> @@ -547,7 +547,7 @@ providing the system administrator with some help in common tasks.") (define-public util-linux (package (name "util-linux") - (version "2.31") + (version "2.31.1") (source (origin (method url-fetch) (uri (string-append "mirror://kernel.org/linux/utils/" @@ -555,7 +555,7 @@ providing the system administrator with some help in common tasks.") name "-" version ".tar.xz")) (sha256 (base32 - "12nw108xjhm63sh2n5a0qs33vpvbvb6rln96l9j50p7wykf7rgpr")) + "04fzrnrr3pvqskvjn9f81y0knh0jvvqx4lmbz5pd4lfdm5pv2l8s")) (patches (search-patches "util-linux-tests.patch")) (modules '((guix build utils))) (snippet @@ -1365,7 +1365,7 @@ Linux-based operating systems.") (arguments '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (add-before 'bootstrap 'patch-stuff (lambda _ ;; Fix "field ‘ip6’ has incomplete type" errors. (substitute* "libbridge/libbridge.h" @@ -1378,7 +1378,7 @@ Linux-based operating systems.") (("\\$\\(MAKE\\) \\$\\(MFLAGS\\) -C \\$\\$x ;") "$(MAKE) $(MFLAGS) -C $$x || exit 1;")) - (zero? (system* "autoreconf" "-vf"))))) + #t))) #:tests? #f)) ; no 'check' target (home-page @@ -1936,7 +1936,7 @@ to use Linux' inotify mechanism, which allows file accesses to be monitored.") (define-public kmod (package (name "kmod") - (version "24") + (version "25") (source (origin (method url-fetch) (uri @@ -1944,7 +1944,7 @@ to use Linux' inotify mechanism, which allows file accesses to be monitored.") "kmod-" version ".tar.xz")) (sha256 (base32 - "15xkkkzvca9flvkm48gkh8y8f13vlm3sl7nz9ydc7b3jy4fqs2v1")) + "1kgixs4m3jvwk7fb3d18n6j77qhgi9qfv4csj35rs5ancr4ycrbi")) (patches (search-patches "kmod-module-directory.patch")))) (build-system gnu-build-system) (native-inputs @@ -1953,19 +1953,20 @@ to use Linux' inotify mechanism, which allows file accesses to be monitored.") `(("xz" ,xz) ("zlib" ,zlib))) (arguments - `(#:tests? #f ; FIXME: Investigate test failures + `(#:tests? #f ; FIXME: Investigate test failures #:configure-flags '("--with-xz" "--with-zlib") - #:phases (alist-cons-after - 'install 'install-modprobe&co - (lambda* (#:key outputs #:allow-other-keys) - (let* ((out (assoc-ref outputs "out")) - (bin (string-append out "/bin"))) - (for-each (lambda (tool) - (symlink "kmod" - (string-append bin "/" tool))) - '("insmod" "rmmod" "lsmod" "modprobe" - "modinfo" "depmod")))) - %standard-phases))) + #:phases + (modify-phases %standard-phases + (add-after 'install 'install-modprobe&co + (lambda* (#:key outputs #:allow-other-keys) + (let* ((out (assoc-ref outputs "out")) + (bin (string-append out "/bin"))) + (for-each (lambda (tool) + (symlink "kmod" + (string-append bin "/" tool))) + '("insmod" "rmmod" "lsmod" "modprobe" + "modinfo" "depmod")) + #t)))))) (home-page "https://www.kernel.org/") (synopsis "Kernel module tools") (description "Kmod is a set of tools to handle common tasks with Linux @@ -1981,7 +1982,7 @@ from the module-init-tools project.") ;; The post-systemd fork, maintained by Gentoo. (package (name "eudev") - (version "3.2.4") + (version "3.2.5") (source (origin (method url-fetch) (uri (string-append "https://github.com/gentoo/eudev/archive/v" @@ -1989,20 +1990,19 @@ from the module-init-tools project.") (file-name (string-append name "-" version ".zip")) (sha256 (base32 - "1r1ag0snarygrj5qqxi2xdq9w6g3sfjd5jx1b0fl7zmqlsz3vvxx")) + "0c9l3m3mr1nvrvlcnzh5gjdg9p9k7hh0jk04wh596cbmbass2nhd")) (patches (search-patches "eudev-rules-directory.patch")))) (build-system gnu-build-system) (arguments '(#:phases (modify-phases %standard-phases - (add-before 'configure 'bootstrap + (add-before 'bootstrap 'patch-file-names (lambda* (#:key inputs #:allow-other-keys) (substitute* "man/make.sh" (("/usr/bin/xsltproc") (string-append (assoc-ref inputs "xsltproc") "/bin/xsltproc"))) - ;; Manual pages are regenerated here. - (zero? (system* "./autogen.sh")))) + #t)) (add-after 'install 'build-hwdb (lambda* (#:key outputs #:allow-other-keys) ;; Build OUT/etc/udev/hwdb.bin. This allows 'lsusb' and @@ -3096,7 +3096,7 @@ write access to exFAT devices.") (build-system gnu-build-system) (arguments '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ ;; The tarball was not generated with 'make dist' so we ;; need to bootstrap things ourselves. @@ -3231,12 +3231,6 @@ from the btrfs-progs package. It is meant to be used in initrds.") (base32 "1bir9ladb58ijlcvrjrq1fb1xv5ys50zdjaq0yzliib0apsyrnyl")))) (build-system gnu-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vif"))))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) @@ -3456,12 +3450,7 @@ The following service daemons are also provided: (build-system gnu-build-system) (arguments `(;; Avoid using OpenSSL, curl, and libxml2, reducing the closure by 166 MiB. - #:configure-flags '("--without-nistbeacon") - #:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "sh" "autogen.sh"))))))) + #:configure-flags '("--without-nistbeacon"))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) diff --git a/gnu/packages/m4.scm b/gnu/packages/m4.scm index 32e7c2ae42..b223ce91d1 100644 --- a/gnu/packages/m4.scm +++ b/gnu/packages/m4.scm @@ -1,5 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012, 2013, 2015 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -40,18 +41,19 @@ ;; proceeds and fails, unsurprisingly. #:tests? ,(not (%current-target-system)) - #:phases (alist-cons-before - 'check 'pre-check - (lambda* (#:key inputs #:allow-other-keys) - ;; Fix references to /bin/sh. - (let ((bash (assoc-ref inputs "bash"))) - (for-each patch-shebang - (find-files "tests" "\\.sh$")) - (substitute* (find-files "tests" - "posix_spawn") - (("/bin/sh") - (format #f "~a/bin/sh" bash))))) - %standard-phases))) + #:phases + (modify-phases %standard-phases + (add-before 'check 'pre-check + (lambda* (#:key inputs #:allow-other-keys) + ;; Fix references to /bin/sh. + (let ((bash (assoc-ref inputs "bash"))) + (for-each patch-shebang + (find-files "tests" "\\.sh$")) + (substitute* (find-files "tests" + "posix_spawn") + (("/bin/sh") + (format #f "~a/bin/sh" bash))) + #t)))))) (synopsis "Macro processor") (description "GNU M4 is an implementation of the M4 macro language, which features diff --git a/gnu/packages/make-bootstrap.scm b/gnu/packages/make-bootstrap.scm index 779b7ef5aa..e779376df9 100644 --- a/gnu/packages/make-bootstrap.scm +++ b/gnu/packages/make-bootstrap.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -143,24 +144,24 @@ for `sh' in $PATH, and without nscd, and with static NSS modules." (arguments (substitute-keyword-arguments (package-arguments bzip2) ((#:phases phases) - `(alist-cons-before - 'build 'dash-static - (lambda _ - (substitute* "Makefile" - (("^LDFLAGS[[:blank:]]*=.*$") - "LDFLAGS = -static"))) - ,phases)))))) + `(modify-phases ,phases + (add-before 'build 'dash-static + (lambda _ + (substitute* "Makefile" + (("^LDFLAGS[[:blank:]]*=.*$") + "LDFLAGS = -static")) + #t)))))))) (xz (package (inherit xz) (arguments `(#:strip-flags '("--strip-all") - #:phases (alist-cons-before - 'configure 'static-executable - (lambda _ - ;; Ask Libtool for a static executable. - (substitute* "src/xz/Makefile.in" - (("^xz_LDADD =") - "xz_LDADD = -all-static"))) - %standard-phases))))) + #:phases (modify-phases %standard-phases + (add-before 'configure 'static-executable + (lambda _ + ;; Ask Libtool for a static executable. + (substitute* "src/xz/Makefile.in" + (("^xz_LDADD =") + "xz_LDADD = -all-static")) + #t))))))) (gawk (package (inherit gawk) (source (origin (inherit (package-source gawk)) (patches (cons (search-patch "gawk-shell.patch") @@ -175,14 +176,14 @@ for `sh' in $PATH, and without nscd, and with static NSS modules." ,@(substitute-keyword-arguments (package-arguments gawk) ((#:phases phases) - `(alist-cons-before - 'configure 'no-export-dynamic - (lambda _ - ;; Since we use `-static', remove - ;; `-export-dynamic'. - (substitute* "configure" - (("-Wl,-export-dynamic") ""))) - ,phases))))) + `(modify-phases ,phases + (add-before 'configure 'no-export-dynamic + (lambda _ + ;; Since we use `-static', remove + ;; `-export-dynamic'. + (substitute* "configure" + (("-Wl,-export-dynamic") "")) + #t))))))) (inputs (if (%current-target-system) `(("bash" ,static-bash)) '())))) @@ -306,19 +307,19 @@ for `sh' in $PATH, and without nscd, and with static NSS modules." ((#:configure-flags flags _ ...) flags))) #:strip-flags '("--strip-all") - #:phases (alist-cons-before - 'configure 'all-static - (lambda _ - ;; The `-all-static' libtool flag can only be passed - ;; after `configure', since configure tests don't use - ;; libtool, and only for executables built with libtool. - (substitute* '("binutils/Makefile.in" - "gas/Makefile.in" - "ld/Makefile.in") - (("^LDFLAGS =(.*)$" line) - (string-append line - "\nAM_LDFLAGS = -static -all-static\n")))) - %standard-phases))))) + #:phases (modify-phases %standard-phases + (add-before 'configure 'all-static + (lambda _ + ;; The `-all-static' libtool flag can only be passed + ;; after `configure', since configure tests don't use + ;; libtool, and only for executables built with libtool. + (substitute* '("binutils/Makefile.in" + "gas/Makefile.in" + "ld/Makefile.in") + (("^LDFLAGS =(.*)$" line) + (string-append line + "\nAM_LDFLAGS = -static -all-static\n"))) + #t))))))) (define %binutils-static-stripped ;; The subset of Binutils that we need. @@ -424,18 +425,18 @@ for `sh' in $PATH, and without nscd, and with static NSS modules." (remove (cut string-match "--(.*plugin|enable-languages)" <>) ,flags))) ((#:phases phases) - `(alist-cons-after - 'pre-configure 'remove-lgcc_s - (lambda _ - ;; Remove the '-lgcc_s' added to GNU_USER_TARGET_LIB_SPEC in - ;; the 'pre-configure phase of our main gcc package, because - ;; that shared library is not present in this static gcc. See - ;; <https://lists.gnu.org/archive/html/guix-devel/2015-01/msg00008.html>. - (substitute* (cons "gcc/config/rs6000/sysv4.h" - (find-files "gcc/config" - "^gnu-user.*\\.h$")) - ((" -lgcc_s}}") "}}"))) - ,phases))))) + `(modify-phases ,phases + (add-after 'pre-configure 'remove-lgcc_s + (lambda _ + ;; Remove the '-lgcc_s' added to GNU_USER_TARGET_LIB_SPEC in + ;; the 'pre-configure phase of our main gcc package, because + ;; that shared library is not present in this static gcc. See + ;; <https://lists.gnu.org/archive/html/guix-devel/2015-01/msg00008.html>. + (substitute* (cons "gcc/config/rs6000/sysv4.h" + (find-files "gcc/config" + "^gnu-user.*\\.h$")) + ((" -lgcc_s}}") "}}")) + #t))))))) (native-inputs (if (%current-target-system) `(;; When doing a Canadian cross, we need GMP/MPFR/MPC both diff --git a/gnu/packages/man.scm b/gnu/packages/man.scm index 257cabbbb6..644738f717 100644 --- a/gnu/packages/man.scm +++ b/gnu/packages/man.scm @@ -189,7 +189,7 @@ Linux kernel and C library interfaces employed by user-space programs.") (define-public help2man (package (name "help2man") - (version "1.47.5") + (version "1.47.6") (source (origin (method url-fetch) @@ -197,7 +197,7 @@ Linux kernel and C library interfaces employed by user-space programs.") version ".tar.xz")) (sha256 (base32 - "1cb14kp380jzk1yi4i7x9d8qplc8c5mgcbgycgs9ggpx34jhp9kw")))) + "0vz4dlrvy4vc6l7w0a7n668pfa0rdm73wr2gar58wqranyah46yr")))) (build-system gnu-build-system) (arguments `(;; There's no `check' target. #:tests? #f)) diff --git a/gnu/packages/messaging.scm b/gnu/packages/messaging.scm index b6323c39b2..d0e0431130 100644 --- a/gnu/packages/messaging.scm +++ b/gnu/packages/messaging.scm @@ -243,13 +243,13 @@ identi.ca and status.net).") #:phases (modify-phases %standard-phases ;; Release 2.12.4 wasn't properly bootstrapped. Later ones might be! - (add-after 'unpack 'bootstrap + (add-before 'boostrap 'copy-intltool-makefile (lambda* (#:key inputs #:allow-other-keys) ;; This file is still required for autoreconf. (copy-file (string-append (assoc-ref inputs "intltool") "/share/intltool/Makefile.in.in") "po/Makefile.in.in") - (zero? (system* "autoreconf" "-fiv"))))))) + #t))))) (synopsis "Graphical IRC Client") (description "HexChat lets you connect to multiple IRC networks at once. The main @@ -1365,12 +1365,6 @@ is also scriptable and extensible via Guile.") (base32 "0iaj56fkd5bjvqpvq3324ni895rmbj1akbfqipjydnghfwaym4z6")))) (build-system gnu-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-before 'configure 'bootstrap - (lambda _ - (zero? (system* "./bootstrap.sh"))))))) (inputs `(("expat" ,expat) ("openssl" ,openssl))) @@ -1400,12 +1394,6 @@ manual SSL certificate verification.") (base32 "1hzwdax4nsz0fncf5bjfza0cn0lc6xsf38y569ql1gg5hvwr6169")))) (build-system gnu-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-before 'configure 'bootstrap - (lambda _ - (zero? (system* "./bootstrap.sh"))))))) (inputs `(("expat" ,expat) ("openssl" ,openssl))) diff --git a/gnu/packages/microcom.scm b/gnu/packages/microcom.scm index dcb864808f..67fd5fe355 100644 --- a/gnu/packages/microcom.scm +++ b/gnu/packages/microcom.scm @@ -39,12 +39,6 @@ (base32 "080ci5589bpyy5kcl51csmvpw9zysify189hw6awx69pi3cjnxly")))) (build-system gnu-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-i"))))))) (inputs `(("readline" ,readline))) (native-inputs `(("automake" ,automake) ("autoconf" ,autoconf))) diff --git a/gnu/packages/multiprecision.scm b/gnu/packages/multiprecision.scm index 4bfe0ac563..ee427f84eb 100644 --- a/gnu/packages/multiprecision.scm +++ b/gnu/packages/multiprecision.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018 Eric Bavier <bavier@member.fsf.org> +;;; Copyright © 2018 Efraim Flashner <efraim@flashner.co.il> ;;; ;;; This file is part of GNU Guix. ;;; @@ -91,13 +92,13 @@ algebra.") (define-public mpfr (package (name "mpfr") - (version "3.1.6") + (version "4.0.1") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/mpfr/mpfr-" version ".tar.xz")) (sha256 (base32 - "0l598h9klpgkz2bp0rxiqb90mkqh9f2f81n5rpy191j00hdaqqks")))) + "0vp1lrc08gcmwdaqck6bpzllkrykvp06vz5gnqpyw0v3h9h4m1v7")))) (build-system gnu-build-system) (outputs '("out" "debug")) (propagated-inputs `(("gmp" ,gmp))) ; <mpfr.h> refers to <gmp.h> @@ -112,14 +113,14 @@ correct rounding.") (define-public mpc (package (name "mpc") - (version "1.0.3") + (version "1.1.0") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/mpc/mpc-" version ".tar.gz")) (sha256 (base32 - "1hzci2zrrd7v3g1jk35qindq05hbl0bhjcyyisq9z209xb3fqzb1")))) + "0biwnhjm3rx3hc0rfpvyniky4lpzsvdcwhmcn7f0h4iw2hwcb1b9")))) (build-system gnu-build-system) (outputs '("out" "debug")) (propagated-inputs `(("gmp" ,gmp) ; <mpc.h> refers to both diff --git a/gnu/packages/ncurses.scm b/gnu/packages/ncurses.scm index 548261289e..6bc98b15d8 100644 --- a/gnu/packages/ncurses.scm +++ b/gnu/packages/ncurses.scm @@ -40,7 +40,7 @@ (define-public ncurses (package (name "ncurses") - (version "6.0-20170930") + (version "6.1") (source (origin (method url-fetch) (uri (string-append "mirror://gnu/ncurses/ncurses-" @@ -48,7 +48,7 @@ ".tar.gz")) (sha256 (base32 - "0q3jck7lna77z5r42f13c4xglc7azd19pxfrjrpgp2yf615w4lgm")))) + "05qdmbmrrn88ii9f66rkcmcyzp1kb1ymkx7g040lfkd1nkp7w1da")))) (build-system gnu-build-system) (outputs '("out" "doc")) ;1 MiB of man pages @@ -56,7 +56,8 @@ (let ((patch-makefile-phase '(lambda _ (for-each patch-makefile-SHELL - (find-files "." "Makefile.in")))) + (find-files "." "Makefile.in")) + #t)) (configure-phase ;; The 'configure' script does not understand '--docdir', so we must ;; override that and use '--mandir' instead. @@ -64,21 +65,27 @@ #:allow-other-keys) (let ((out (assoc-ref outputs "out")) (doc (assoc-ref outputs "doc"))) - (zero? (apply system* "./configure" - (string-append "SHELL=" (which "sh")) - (string-append "--build=" build) - (string-append "--prefix=" out) - (string-append "--mandir=" doc "/share/man") - (if target - (cons (string-append "--host=" target) - configure-flags) - configure-flags)))))) + (apply invoke "./configure" + (string-append "SHELL=" (which "sh")) + (string-append "--build=" build) + (string-append "--prefix=" out) + (string-append "--mandir=" doc "/share/man") + (if target + (cons (string-append "--host=" target) + configure-flags) + configure-flags)) + #t))) (apply-rollup-patch-phase + ;; Ncurses distributes "stable" patchsets to be applied on top + ;; of the release tarball. These are only available as shell + ;; scripts(!) so we decompress and apply them in a phase. + ;; See <https://invisible-mirror.net/archives/ncurses/6.1/README>. '(lambda* (#:key inputs native-inputs #:allow-other-keys) (copy-file (assoc-ref (or native-inputs inputs) "rollup-patch") (string-append (getcwd) "/rollup-patch.sh.bz2")) - (and (zero? (system* "bzip2" "-d" "rollup-patch.sh.bz2")) - (zero? (system* "sh" "rollup-patch.sh"))))) + (invoke "bzip2" "-d" "rollup-patch.sh.bz2") + (invoke "sh" "rollup-patch.sh") + #t)) (remove-shebang-phase '(lambda _ ;; To avoid retaining a reference to the bootstrap Bash via the @@ -149,7 +156,8 @@ (when (file-exists? packagew.pc) (symlink packagew.pc package.pc)))) '()))) - '("curses" "ncurses" "form" "panel" "menu"))))))) + '("curses" "ncurses" "form" "panel" "menu"))) + #t)))) `(#:configure-flags ,(cons* 'quasiquote @@ -174,8 +182,6 @@ ,@(if (target-mingw?) '("--enable-term-driver") '())))) #:tests? #f ; no "check" target #:phases (modify-phases %standard-phases - (add-after 'unpack 'apply-rollup-patch - ,apply-rollup-patch-phase) (replace 'configure ,configure-phase) (add-after 'install 'post-install ,post-install-phase) @@ -185,22 +191,7 @@ ,remove-shebang-phase))))) (self-native-input? #t) ; for `tic' (native-inputs - `(("pkg-config" ,pkg-config) - - ;; Ncurses distributes "stable" patchsets to be applied on top - ;; of the release tarball. These are only available as shell - ;; scripts(!) so we decompress and apply them in a phase. - ;; See <https://invisible-mirror.net/archives/ncurses/6.0/README>. - ("rollup-patch" - ,(origin - (method url-fetch) - (uri (string-append - "https://invisible-mirror.net/archives/ncurses/" - (car (string-split version #\-)) - "/ncurses-" version "-patch.sh.bz2")) - (sha256 - (base32 - "08a1pp8wnj1fwpa1pz3fgrmd6xwp21idniswqz8lx3w3z2nb4ydi")))))) + `(("pkg-config" ,pkg-config))) (native-search-paths (list (search-path-specification (variable "TERMINFO_DIRS") diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm index bf4bee2f87..167d1af777 100644 --- a/gnu/packages/networking.scm +++ b/gnu/packages/networking.scm @@ -1565,8 +1565,6 @@ interface and a programmable text output for scripting.") (modify-phases %standard-phases (add-after 'unpack 'chdir (lambda _ (chdir "libnet") #t)) - (add-after 'chdir 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-vif")))) (add-before 'build 'build-doc (lambda* (#:key make-flags #:allow-other-keys) (zero? (apply system* "make" "-C" "doc" "doc" diff --git a/gnu/packages/onc-rpc.scm b/gnu/packages/onc-rpc.scm index 03d51d9517..72f2dd6409 100644 --- a/gnu/packages/onc-rpc.scm +++ b/gnu/packages/onc-rpc.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2014, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2014, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016 John Darrington <jmd@gnu.org> ;;; Copyright © 2017, 2018 Leo Famulari <leo@famulari.name> ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> @@ -113,12 +113,6 @@ universal addresses.") (base32 "1y6kmxmv1difzvdhx7grqzw0j2v2b74mg4kjb803m8jcgkqqx8m5")))) (build-system gnu-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (invoke "sh" "autogen.sh")))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm index 709cdfd0f7..376c7d4fdb 100644 --- a/gnu/packages/package-management.scm +++ b/gnu/packages/package-management.scm @@ -142,7 +142,7 @@ (ice-9 rdelim)) #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ ;; Make sure 'msgmerge' can modify the PO files. (for-each (lambda (po) diff --git a/gnu/packages/patches/graphite2-ffloat-store.patch b/gnu/packages/patches/graphite2-ffloat-store.patch deleted file mode 100644 index f6ee56973e..0000000000 --- a/gnu/packages/patches/graphite2-ffloat-store.patch +++ /dev/null @@ -1,34 +0,0 @@ -Fix test failures of awamicmp1 and awamicmp2. - -Debian bug report: - -https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855814 - -Patch adapted from upstream source repository: - -https://github.com/silnrsi/graphite/commit/f7bbdd87d510d587c872e314d6458160c0069c65 - -From f7bbdd87d510d587c872e314d6458160c0069c65 Mon Sep 17 00:00:00 2001 -From: Martin Hosken <martin_hosken@sil.org> -Date: Tue, 14 Feb 2017 17:00:03 +0000 -Subject: [PATCH] try -ffloat-store for fp stability. Remove nested const to - work around VS bug - ---- - src/CMakeLists.txt | 2 +- - src/inc/locale2lcid.h | 4 ++-- - 2 files changed, 3 insertions(+), 3 deletions(-) - -diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt -index 4f1e7e5..5b61b5c 100644 ---- a/src/CMakeLists.txt -+++ b/src/CMakeLists.txt -@@ -108,7 +108,7 @@ set_target_properties(graphite2 PROPERTIES PUBLIC_HEADER "${GRAPHITE_HEADERS}" - - if (${CMAKE_SYSTEM_NAME} STREQUAL "Linux") - set_target_properties(graphite2 PROPERTIES -- COMPILE_FLAGS "-Wall -Wextra -Wno-unknown-pragmas -Wendif-labels -Wshadow -Wctor-dtor-privacy -Wnon-virtual-dtor -fno-rtti -fno-exceptions -fvisibility=hidden -fvisibility-inlines-hidden -fno-stack-protector" -+ COMPILE_FLAGS "-Wall -Wextra -Wno-unknown-pragmas -Wendif-labels -Wshadow -Wctor-dtor-privacy -Wnon-virtual-dtor -fno-rtti -fno-exceptions -fvisibility=hidden -fvisibility-inlines-hidden -fno-stack-protector -ffloat-store" - LINK_FLAGS "-nodefaultlibs ${GRAPHITE_LINK_FLAGS}" - LINKER_LANGUAGE C) - if (CMAKE_COMPILER_IS_GNUCXX) diff --git a/gnu/packages/patches/lcms-CVE-2016-10165.patch b/gnu/packages/patches/lcms-CVE-2016-10165.patch deleted file mode 100644 index fa4d75c9ee..0000000000 --- a/gnu/packages/patches/lcms-CVE-2016-10165.patch +++ /dev/null @@ -1,36 +0,0 @@ -Fix CVE-2016-10165, an out-of-bounds heap read in Type_MLU_Read(): - -https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-10165 -http://seclists.org/oss-sec/2016/q3/288 -https://bugzilla.redhat.com/show_bug.cgi?id=1367357 -https://security-tracker.debian.org/tracker/CVE-2016-10165 - -Patch copied from upstream source repository: - -https://github.com/mm2/Little-CMS/commit/5ca71a7bc18b6897ab21d815d15e218e204581e2 - -From 5ca71a7bc18b6897ab21d815d15e218e204581e2 Mon Sep 17 00:00:00 2001 -From: Marti <marti.maria@tktbrainpower.com> -Date: Mon, 15 Aug 2016 23:31:39 +0200 -Subject: [PATCH] Added an extra check to MLU bounds - -Thanks to Ibrahim el-sayed for spotting the bug ---- - src/cmstypes.c | 1 + - 1 file changed, 1 insertion(+) - -diff --git a/src/cmstypes.c b/src/cmstypes.c -index cb61860..c7328b9 100644 ---- a/src/cmstypes.c -+++ b/src/cmstypes.c -@@ -1460,6 +1460,7 @@ void *Type_MLU_Read(struct _cms_typehandler_struct* self, cmsIOHANDLER* io, cmsU - - // Check for overflow - if (Offset < (SizeOfHeader + 8)) goto Error; -+ if ((Offset + Len) > SizeOfTag + 8) goto Error; - - // True begin of the string - BeginOfThisString = Offset - SizeOfHeader - 8; --- -2.11.0 - diff --git a/gnu/packages/patches/libtasn1-CVE-2017-10790.patch b/gnu/packages/patches/libtasn1-CVE-2017-10790.patch deleted file mode 100644 index 6cec0c8030..0000000000 --- a/gnu/packages/patches/libtasn1-CVE-2017-10790.patch +++ /dev/null @@ -1,63 +0,0 @@ -Fix CVE-2017-10790: - -https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-10790 - -Patch copied from upstream source repository: - -https://git.savannah.nongnu.org/cgit/libtasn1.git/commit/?id=d8d805e1f2e6799bb2dff4871a8598dc83088a39 - -From d8d805e1f2e6799bb2dff4871a8598dc83088a39 Mon Sep 17 00:00:00 2001 -From: Nikos Mavrogiannopoulos <nmav@redhat.com> -Date: Thu, 22 Jun 2017 16:31:37 +0200 -Subject: [PATCH] _asn1_check_identifier: safer access to values read - -Signed-off-by: Nikos Mavrogiannopoulos <nmav@redhat.com> ---- - lib/parser_aux.c | 17 ++++++++++++----- - 1 file changed, 12 insertions(+), 5 deletions(-) - -diff --git a/lib/parser_aux.c b/lib/parser_aux.c -index 976ab38..786ea64 100644 ---- a/lib/parser_aux.c -+++ b/lib/parser_aux.c -@@ -955,7 +955,7 @@ _asn1_check_identifier (asn1_node node) - if (p2 == NULL) - { - if (p->value) -- _asn1_strcpy (_asn1_identifierMissing, p->value); -+ _asn1_str_cpy (_asn1_identifierMissing, sizeof(_asn1_identifierMissing), (char*)p->value); - else - _asn1_strcpy (_asn1_identifierMissing, "(null)"); - return ASN1_IDENTIFIER_NOT_FOUND; -@@ -968,9 +968,15 @@ _asn1_check_identifier (asn1_node node) - if (p2 && (type_field (p2->type) == ASN1_ETYPE_DEFAULT)) - { - _asn1_str_cpy (name2, sizeof (name2), node->name); -- _asn1_str_cat (name2, sizeof (name2), "."); -- _asn1_str_cat (name2, sizeof (name2), (char *) p2->value); -- _asn1_strcpy (_asn1_identifierMissing, p2->value); -+ if (p2->value) -+ { -+ _asn1_str_cat (name2, sizeof (name2), "."); -+ _asn1_str_cat (name2, sizeof (name2), (char *) p2->value); -+ _asn1_str_cpy (_asn1_identifierMissing, sizeof(_asn1_identifierMissing), (char*)p2->value); -+ } -+ else -+ _asn1_strcpy (_asn1_identifierMissing, "(null)"); -+ - p2 = asn1_find_node (node, name2); - if (!p2 || (type_field (p2->type) != ASN1_ETYPE_OBJECT_ID) || - !(p2->type & CONST_ASSIGN)) -@@ -990,7 +996,8 @@ _asn1_check_identifier (asn1_node node) - _asn1_str_cpy (name2, sizeof (name2), node->name); - _asn1_str_cat (name2, sizeof (name2), "."); - _asn1_str_cat (name2, sizeof (name2), (char *) p2->value); -- _asn1_strcpy (_asn1_identifierMissing, p2->value); -+ _asn1_str_cpy (_asn1_identifierMissing, sizeof(_asn1_identifierMissing), (char*)p2->value); -+ - p2 = asn1_find_node (node, name2); - if (!p2 || (type_field (p2->type) != ASN1_ETYPE_OBJECT_ID) - || !(p2->type & CONST_ASSIGN)) --- -2.13.3 - diff --git a/gnu/packages/patches/libtasn1-CVE-2018-6003.patch b/gnu/packages/patches/libtasn1-CVE-2018-6003.patch deleted file mode 100644 index 3e6140518d..0000000000 --- a/gnu/packages/patches/libtasn1-CVE-2018-6003.patch +++ /dev/null @@ -1,73 +0,0 @@ -Fix CVE-2018-6003: - -https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2018-6003 -https://lists.gnu.org/archive/html/help-libtasn1/2018-01/msg00000.html - -Patch copied from upstream source repository: - -https://gitlab.com/gnutls/libtasn1/commit/c593ae84cfcde8fea45787e53950e0ac71e9ca97 - -From c593ae84cfcde8fea45787e53950e0ac71e9ca97 Mon Sep 17 00:00:00 2001 -From: Nikos Mavrogiannopoulos <nmav@redhat.com> -Date: Thu, 4 Jan 2018 10:52:05 +0100 -Subject: [PATCH] _asn1_decode_simple_ber: restrict the levels of recursion to 3 - -On indefinite string decoding, setting a maximum level of recursions -protects the BER decoder from a stack exhaustion due to large amounts -of recursion. - -Signed-off-by: Nikos Mavrogiannopoulos <nmav@redhat.com> ---- - lib/decoding.c | 21 +++++++++++++++++++-- - 1 file changed, 19 insertions(+), 2 deletions(-) - -diff --git a/lib/decoding.c b/lib/decoding.c -index 2240b09..0ee35d3 100644 ---- a/lib/decoding.c -+++ b/lib/decoding.c -@@ -45,6 +45,13 @@ - - #define DECODE_FLAG_HAVE_TAG 1 - #define DECODE_FLAG_INDEFINITE (1<<1) -+/* On indefinite string decoding, allow this maximum levels -+ * of recursion. Allowing infinite recursion, makes the BER -+ * decoder susceptible to stack exhaustion due to that recursion. -+ */ -+#define DECODE_FLAG_LEVEL1 (1<<2) -+#define DECODE_FLAG_LEVEL2 (1<<3) -+#define DECODE_FLAG_LEVEL3 (1<<4) - - #define DECR_LEN(l, s) do { \ - l -= s; \ -@@ -2216,7 +2223,8 @@ _asn1_decode_simple_ber (unsigned int etype, const unsigned char *der, - } - - /* indefinite constructed */ -- if (((dflags & DECODE_FLAG_INDEFINITE) || class == ASN1_CLASS_STRUCTURED) && ETYPE_IS_STRING(etype)) -+ if ((((dflags & DECODE_FLAG_INDEFINITE) || class == ASN1_CLASS_STRUCTURED) && ETYPE_IS_STRING(etype)) && -+ !(dflags & DECODE_FLAG_LEVEL3)) - { - len_len = 1; - -@@ -2236,8 +2244,17 @@ _asn1_decode_simple_ber (unsigned int etype, const unsigned char *der, - do - { - unsigned tmp_len; -+ unsigned flags = DECODE_FLAG_HAVE_TAG; -+ -+ if (dflags & DECODE_FLAG_LEVEL1) -+ flags |= DECODE_FLAG_LEVEL2; -+ else if (dflags & DECODE_FLAG_LEVEL2) -+ flags |= DECODE_FLAG_LEVEL3; -+ else -+ flags |= DECODE_FLAG_LEVEL1; - -- result = asn1_decode_simple_ber(etype, p, der_len, &out, &out_len, &tmp_len); -+ result = _asn1_decode_simple_ber(etype, p, der_len, &out, &out_len, &tmp_len, -+ flags); - if (result != ASN1_SUCCESS) - { - warn(); --- -libgit2 0.26.0 - diff --git a/gnu/packages/patches/libxcb-python-3.5-compat.patch b/gnu/packages/patches/libxcb-python-3.5-compat.patch deleted file mode 100644 index f652498aad..0000000000 --- a/gnu/packages/patches/libxcb-python-3.5-compat.patch +++ /dev/null @@ -1,64 +0,0 @@ -Fix compatibility issue with Python 3.5. - -Patch copied from upstream source repository: - -https://cgit.freedesktop.org/xcb/libxcb/commit/?id=8740a288ca468433141341347aa115b9544891d3 - -From 8740a288ca468433141341347aa115b9544891d3 Mon Sep 17 00:00:00 2001 -From: Thomas Klausner <wiz@NetBSD.org> -Date: Thu, 19 May 2016 17:31:18 +0200 -Subject: [PATCH] Fix inconsistent use of tabs vs. space. - -Needed for at least python-3.5.x. - -Signed-off-by: Thomas Klausner <wiz@NetBSD.org> -Signed-off-by: Uli Schlachter <psychon@znc.in> ---- - src/c_client.py | 14 +++++++------- - 1 file changed, 7 insertions(+), 7 deletions(-) - -diff --git a/src/c_client.py b/src/c_client.py -index 57de3fb..043338d 100644 ---- a/src/c_client.py -+++ b/src/c_client.py -@@ -1364,7 +1364,7 @@ def _c_serialize(context, self): - _c(' unsigned int xcb_align_to = 0;') - if self.is_switch: - _c(' unsigned int xcb_padding_offset = %d;', -- self.get_align_offset() ) -+ self.get_align_offset() ) - prefix = [('_aux', '->', self)] - aux_ptr = 'xcb_out' - -@@ -1390,7 +1390,7 @@ def _c_serialize(context, self): - _c(' unsigned int xcb_align_to = 0;') - if self.is_switch: - _c(' unsigned int xcb_padding_offset = %d;', -- self.get_align_offset() ) -+ self.get_align_offset() ) - - elif 'sizeof' == context: - param_names = [p[2] for p in params] -@@ -1930,14 +1930,14 @@ def _c_accessors_list(self, field): - # from the request size and divide that by the member size - return '(((R->length * 4) - sizeof('+ self.c_type + '))/'+'sizeof('+field.type.member.c_wiretype+'))' - else: -- # use the accessor to get the start of the list, then -- # compute the length of it by subtracting it from -+ # use the accessor to get the start of the list, then -+ # compute the length of it by subtracting it from - # the adress of the first byte after the end of the - # request -- after_end_of_request = '(((char*)R) + R->length * 4)' -- start_of_list = '%s(R)' % (field.c_accessor_name) -+ after_end_of_request = '(((char*)R) + R->length * 4)' -+ start_of_list = '%s(R)' % (field.c_accessor_name) - bytesize_of_list = '%s - (char*)(%s)' % (after_end_of_request, start_of_list) -- return '(%s) / sizeof(%s)' % (bytesize_of_list, field.type.member.c_wiretype) -+ return '(%s) / sizeof(%s)' % (bytesize_of_list, field.type.member.c_wiretype) - else: - raise Exception( - "lengthless lists with varsized members are not supported. Fieldname '%s'" --- -2.11.1 - diff --git a/gnu/packages/patches/pcre2-CVE-2017-7186.patch b/gnu/packages/patches/pcre2-CVE-2017-7186.patch deleted file mode 100644 index 5c16955aaa..0000000000 --- a/gnu/packages/patches/pcre2-CVE-2017-7186.patch +++ /dev/null @@ -1,68 +0,0 @@ -Patch for <https://nvd.nist.gov/vuln/detail?vulnId=CVE-2017-7186> -taken from <https://vcs.pcre.org/pcre2?view=revision&revision=670>. - ---- trunk/src/pcre2_internal.h 2016/11/19 12:46:24 600 -+++ trunk/src/pcre2_internal.h 2017/02/24 18:25:32 670 -@@ -1774,10 +1774,17 @@ - /* UCD access macros */ - - #define UCD_BLOCK_SIZE 128 --#define GET_UCD(ch) (PRIV(ucd_records) + \ -+#define REAL_GET_UCD(ch) (PRIV(ucd_records) + \ - PRIV(ucd_stage2)[PRIV(ucd_stage1)[(int)(ch) / UCD_BLOCK_SIZE] * \ - UCD_BLOCK_SIZE + (int)(ch) % UCD_BLOCK_SIZE]) - -+#if PCRE2_CODE_UNIT_WIDTH == 32 -+#define GET_UCD(ch) ((ch > MAX_UTF_CODE_POINT)? \ -+ PRIV(dummy_ucd_record) : REAL_GET_UCD(ch)) -+#else -+#define GET_UCD(ch) REAL_GET_UCD(ch) -+#endif -+ - #define UCD_CHARTYPE(ch) GET_UCD(ch)->chartype - #define UCD_SCRIPT(ch) GET_UCD(ch)->script - #define UCD_CATEGORY(ch) PRIV(ucp_gentype)[UCD_CHARTYPE(ch)] -@@ -1834,6 +1841,9 @@ - #define _pcre2_default_compile_context PCRE2_SUFFIX(_pcre2_default_compile_context_) - #define _pcre2_default_match_context PCRE2_SUFFIX(_pcre2_default_match_context_) - #define _pcre2_default_tables PCRE2_SUFFIX(_pcre2_default_tables_) -+#if PCRE2_CODE_UNIT_WIDTH == 32 -+#define _pcre2_dummy_ucd_record PCRE2_SUFFIX(_pcre2_dummy_ucd_record_) -+#endif - #define _pcre2_hspace_list PCRE2_SUFFIX(_pcre2_hspace_list_) - #define _pcre2_vspace_list PCRE2_SUFFIX(_pcre2_vspace_list_) - #define _pcre2_ucd_caseless_sets PCRE2_SUFFIX(_pcre2_ucd_caseless_sets_) -@@ -1858,6 +1868,9 @@ - extern const uint32_t PRIV(vspace_list)[]; - extern const uint32_t PRIV(ucd_caseless_sets)[]; - extern const ucd_record PRIV(ucd_records)[]; -+#if PCRE2_CODE_UNIT_WIDTH == 32 -+extern const ucd_record PRIV(dummy_ucd_record)[]; -+#endif - extern const uint8_t PRIV(ucd_stage1)[]; - extern const uint16_t PRIV(ucd_stage2)[]; - extern const uint32_t PRIV(ucp_gbtable)[]; - ---- trunk/src/pcre2_ucd.c 2015/07/17 15:44:51 316 -+++ trunk/src/pcre2_ucd.c 2017/02/24 18:25:32 670 -@@ -41,6 +41,20 @@ - - const char *PRIV(unicode_version) = "8.0.0"; - -+/* If the 32-bit library is run in non-32-bit mode, character values -+greater than 0x10ffff may be encountered. For these we set up a -+special record. */ -+ -+#if PCRE2_CODE_UNIT_WIDTH == 32 -+const ucd_record PRIV(dummy_ucd_record)[] = {{ -+ ucp_Common, /* script */ -+ ucp_Cn, /* type unassigned */ -+ ucp_gbOther, /* grapheme break property */ -+ 0, /* case set */ -+ 0, /* other case */ -+ }}; -+#endif -+ - /* When recompiling tables with a new Unicode version, please check the - types in this structure definition from pcre2_internal.h (the actual - field names will be different): diff --git a/gnu/packages/patches/pcre2-CVE-2017-8786.patch b/gnu/packages/patches/pcre2-CVE-2017-8786.patch deleted file mode 100644 index 6071d58f07..0000000000 --- a/gnu/packages/patches/pcre2-CVE-2017-8786.patch +++ /dev/null @@ -1,155 +0,0 @@ -Fix CVE-2017-8786: - -https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-8786 -https://bugs.exim.org/show_bug.cgi?id=2079 -https://blogs.gentoo.org/ago/2017/04/29/libpcre-heap-based-buffer-overflow-write-in-pcre2test-c/ - -Patch copied from upstream source repository: - -https://vcs.pcre.org/pcre2?view=revision&revision=696 -https://vcs.pcre.org/pcre2?view=revision&revision=697 - ---- trunk/doc/pcre2api.3 2017/03/21 16:48:40 695 -+++ trunk/doc/pcre2api.3 2017/03/21 17:46:21 696 -@@ -1,4 +1,4 @@ --.TH PCRE2API 3 "24 December 2016" "PCRE2 10.23" -+.TH PCRE2API 3 "21 March 2017" "PCRE2 10.30" - .SH NAME - PCRE2 - Perl-compatible regular expressions (revised API) - .sp -@@ -2633,8 +2633,8 @@ - A text message for an error code from any PCRE2 function (compile, match, or - auxiliary) can be obtained by calling \fBpcre2_get_error_message()\fP. The code - is passed as the first argument, with the remaining two arguments specifying a --code unit buffer and its length, into which the text message is placed. Note --that the message is returned in code units of the appropriate width for the -+code unit buffer and its length in code units, into which the text message is -+placed. The message is returned in code units of the appropriate width for the - library that is being used. - .P - The returned message is terminated with a trailing zero, and the function -@@ -3321,6 +3321,6 @@ - .rs - .sp - .nf --Last updated: 23 December 2016 --Copyright (c) 1997-2016 University of Cambridge. -+Last updated: 21 March 2017 -+Copyright (c) 1997-2017 University of Cambridge. - .fi ---- trunk/src/pcre2_error.c 2017/03/21 16:48:40 695 -+++ trunk/src/pcre2_error.c 2017/03/21 17:46:21 696 -@@ -271,7 +271,7 @@ - Arguments: - enumber error number - buffer where to put the message (zero terminated) -- size size of the buffer -+ size size of the buffer in code units - - Returns: length of message if all is well - negative on error ---- trunk/src/pcre2test.c 2017/03/21 17:46:21 696 -+++ trunk/src/pcre2test.c 2017/03/21 18:36:13 697 -@@ -1017,9 +1017,9 @@ - if (test_mode == PCRE8_MODE) \ - r = pcre2_get_error_message_8(a,G(b,8),G(G(b,8),_size)); \ - else if (test_mode == PCRE16_MODE) \ -- r = pcre2_get_error_message_16(a,G(b,16),G(G(b,16),_size)); \ -+ r = pcre2_get_error_message_16(a,G(b,16),G(G(b,16),_size/2)); \ - else \ -- r = pcre2_get_error_message_32(a,G(b,32),G(G(b,32),_size)) -+ r = pcre2_get_error_message_32(a,G(b,32),G(G(b,32),_size/4)) - - #define PCRE2_GET_OVECTOR_COUNT(a,b) \ - if (test_mode == PCRE8_MODE) \ -@@ -1399,6 +1399,9 @@ - - /* ----- Common macros for two-mode cases ----- */ - -+#define BYTEONE (BITONE/8) -+#define BYTETWO (BITTWO/8) -+ - #define CASTFLD(t,a,b) \ - ((test_mode == G(G(PCRE,BITONE),_MODE))? (t)(G(a,BITONE)->b) : \ - (t)(G(a,BITTWO)->b)) -@@ -1481,9 +1484,9 @@ - - #define PCRE2_GET_ERROR_MESSAGE(r,a,b) \ - if (test_mode == G(G(PCRE,BITONE),_MODE)) \ -- r = G(pcre2_get_error_message_,BITONE)(a,G(b,BITONE),G(G(b,BITONE),_size)); \ -+ r = G(pcre2_get_error_message_,BITONE)(a,G(b,BITONE),G(G(b,BITONE),_size/BYTEONE)); \ - else \ -- r = G(pcre2_get_error_message_,BITTWO)(a,G(b,BITTWO),G(G(b,BITTWO),_size)) -+ r = G(pcre2_get_error_message_,BITTWO)(a,G(b,BITTWO),G(G(b,BITTWO),_size/BYTETWO)) - - #define PCRE2_GET_OVECTOR_COUNT(a,b) \ - if (test_mode == G(G(PCRE,BITONE),_MODE)) \ -@@ -1904,7 +1907,7 @@ - #define PCRE2_DFA_MATCH(a,b,c,d,e,f,g,h,i,j) \ - a = pcre2_dfa_match_16(G(b,16),(PCRE2_SPTR16)c,d,e,f,G(g,16),h,i,j) - #define PCRE2_GET_ERROR_MESSAGE(r,a,b) \ -- r = pcre2_get_error_message_16(a,G(b,16),G(G(b,16),_size)) -+ r = pcre2_get_error_message_16(a,G(b,16),G(G(b,16),_size/2)) - #define PCRE2_GET_OVECTOR_COUNT(a,b) a = pcre2_get_ovector_count_16(G(b,16)) - #define PCRE2_GET_STARTCHAR(a,b) a = pcre2_get_startchar_16(G(b,16)) - #define PCRE2_JIT_COMPILE(r,a,b) r = pcre2_jit_compile_16(G(a,16),b) -@@ -2000,7 +2003,7 @@ - #define PCRE2_DFA_MATCH(a,b,c,d,e,f,g,h,i,j) \ - a = pcre2_dfa_match_32(G(b,32),(PCRE2_SPTR32)c,d,e,f,G(g,32),h,i,j) - #define PCRE2_GET_ERROR_MESSAGE(r,a,b) \ -- r = pcre2_get_error_message_32(a,G(b,32),G(G(b,32),_size)) -+ r = pcre2_get_error_message_32(a,G(b,32),G(G(b,32),_size/4)) - #define PCRE2_GET_OVECTOR_COUNT(a,b) a = pcre2_get_ovector_count_32(G(b,32)) - #define PCRE2_GET_STARTCHAR(a,b) a = pcre2_get_startchar_32(G(b,32)) - #define PCRE2_JIT_COMPILE(r,a,b) r = pcre2_jit_compile_32(G(a,32),b) ---- trunk/src/pcre2test.c 2017/03/21 16:48:40 695 -+++ trunk/src/pcre2test.c 2017/03/21 17:46:21 696 -@@ -2889,7 +2889,7 @@ - { - if (pbuffer32 != NULL) free(pbuffer32); - pbuffer32_size = 4*len + 4; -- if (pbuffer32_size < 256) pbuffer32_size = 256; -+ if (pbuffer32_size < 512) pbuffer32_size = 512; - pbuffer32 = (uint32_t *)malloc(pbuffer32_size); - if (pbuffer32 == NULL) - { -@@ -7600,7 +7600,8 @@ - int errcode; - char *endptr; - --/* Ensure the relevant non-8-bit buffer is available. */ -+/* Ensure the relevant non-8-bit buffer is available. Ensure that it is at -+least 128 code units, because it is used for retrieving error messages. */ - - #ifdef SUPPORT_PCRE2_16 - if (test_mode == PCRE16_MODE) -@@ -7620,7 +7621,7 @@ - #ifdef SUPPORT_PCRE2_32 - if (test_mode == PCRE32_MODE) - { -- pbuffer32_size = 256; -+ pbuffer32_size = 512; - pbuffer32 = (uint32_t *)malloc(pbuffer32_size); - if (pbuffer32 == NULL) - { ---- trunk/testdata/testinput2 2017/03/21 16:48:40 695 -+++ trunk/testdata/testinput2 2017/03/21 17:46:21 696 -@@ -5017,4 +5017,6 @@ - - /(?<!\1((?U)1((?U))))(*F)/never_backslash_c,alt_bsux,anchored,extended - -+/\g{3/ -+ - # End of testinput2 ---- trunk/testdata/testoutput2 2017/03/21 16:48:40 695 -+++ trunk/testdata/testoutput2 2017/03/21 17:46:21 696 -@@ -15570,6 +15570,9 @@ - - /(?<!\1((?U)1((?U))))(*F)/never_backslash_c,alt_bsux,anchored,extended - -+/\g{3/ -+Failed: error 157 at offset 2: \g is not followed by a braced, angle-bracketed, or quoted name/number or by a plain number -+ - # End of testinput2 - Error -63: PCRE2_ERROR_BADDATA (unknown error number) - Error -62: bad serialized data diff --git a/gnu/packages/patches/tar-CVE-2016-6321.patch b/gnu/packages/patches/tar-CVE-2016-6321.patch deleted file mode 100644 index b79be9bc94..0000000000 --- a/gnu/packages/patches/tar-CVE-2016-6321.patch +++ /dev/null @@ -1,51 +0,0 @@ -Fix CVE-2016-6321: - -https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2016-6321 -https://security-tracker.debian.org/tracker/CVE-2016-6321 - -Patch adapted from upstream source repository (the changes to 'NEWS' -don't apply to the Tar 1.29 release tarball). - -http://git.savannah.gnu.org/cgit/tar.git/commit/?id=7340f67b9860ea0531c1450e5aa261c50f67165d - -From 7340f67b9860ea0531c1450e5aa261c50f67165d Mon Sep 17 00:00:00 2001 -From: Paul Eggert <eggert@Penguin.CS.UCLA.EDU> -Date: Sat, 29 Oct 2016 21:04:40 -0700 -Subject: [PATCH] When extracting, skip ".." members - -* NEWS: Document this. -* src/extract.c (extract_archive): Skip members whose names -contain "..". ---- - NEWS | 8 +++++++- - src/extract.c | 8 ++++++++ - 2 files changed, 15 insertions(+), 1 deletion(-) - -diff --git a/src/extract.c b/src/extract.c -index f982433..7904148 100644 ---- a/src/extract.c -+++ b/src/extract.c -@@ -1629,12 +1629,20 @@ extract_archive (void) - { - char typeflag; - tar_extractor_t fun; -+ bool skip_dotdot_name; - - fatal_exit_hook = extract_finish; - - set_next_block_after (current_header); - -+ skip_dotdot_name = (!absolute_names_option -+ && contains_dot_dot (current_stat_info.orig_file_name)); -+ if (skip_dotdot_name) -+ ERROR ((0, 0, _("%s: Member name contains '..'"), -+ quotearg_colon (current_stat_info.orig_file_name))); -+ - if (!current_stat_info.file_name[0] -+ || skip_dotdot_name - || (interactive_option - && !confirm ("extract", current_stat_info.file_name))) - { --- -2.11.0 - diff --git a/gnu/packages/patches/xcb-proto-python3-print.patch b/gnu/packages/patches/xcb-proto-python3-print.patch deleted file mode 100644 index 7d5dc9bc27..0000000000 --- a/gnu/packages/patches/xcb-proto-python3-print.patch +++ /dev/null @@ -1,75 +0,0 @@ -Patch copied from upstream source repository: - -https://cgit.freedesktop.org/xcb/proto/commit/?id=bea5e1c85bdc0950913790364e18228f20395a3d - -From bea5e1c85bdc0950913790364e18228f20395a3d Mon Sep 17 00:00:00 2001 -From: Thomas Klausner <wiz@NetBSD.org> -Date: Thu, 19 May 2016 17:30:05 +0200 -Subject: [PATCH] print() is a function and needs parentheses. - -Fixes build with python-3.x. - -Signed-off-by: Thomas Klausner <wiz@NetBSD.org> -Signed-off-by: Uli Schlachter <psychon@znc.in> ---- - xcbgen/xtypes.py | 12 ++++++------ - 1 file changed, 6 insertions(+), 6 deletions(-) - -diff --git a/xcbgen/xtypes.py b/xcbgen/xtypes.py -index c3b5758..b83b119 100644 ---- a/xcbgen/xtypes.py -+++ b/xcbgen/xtypes.py -@@ -501,7 +501,7 @@ class ComplexType(Type): - int(required_start_align_element.get('align', "4"), 0), - int(required_start_align_element.get('offset', "0"), 0)) - if verbose_align_log: -- print "Explicit start-align for %s: %s\n" % (self, self.required_start_align) -+ print ("Explicit start-align for %s: %s\n" % (self, self.required_start_align)) - - def resolve(self, module): - if self.resolved: -@@ -592,7 +592,7 @@ class ComplexType(Type): - if verbose_align_log: - print ("calc_required_start_align: %s has start-align %s" - % (str(self), str(self.required_start_align))) -- print "Details:\n" + str(log) -+ print ("Details:\n" + str(log)) - if self.required_start_align.offset != 0: - print (("WARNING: %s\n\thas start-align with non-zero offset: %s" - + "\n\tsuggest to add explicit definition with:" -@@ -619,12 +619,12 @@ class ComplexType(Type): - for offset in range(0,align): - align_candidate = Alignment(align, offset) - if verbose_align_log: -- print "trying %s for %s" % (str(align_candidate), str(self)) -+ print ("trying %s for %s" % (str(align_candidate), str(self))) - my_log = AlignmentLog() - if self.is_possible_start_align(align_candidate, callstack, my_log): - log.append(my_log) - if verbose_align_log: -- print "found start-align %s for %s" % (str(align_candidate), str(self)) -+ print ("found start-align %s for %s" % (str(align_candidate), str(self))) - return align_candidate - else: - my_ok_count = my_log.ok_count() -@@ -641,7 +641,7 @@ class ComplexType(Type): - # none of the candidates applies - # this type has illegal internal aligns for all possible start_aligns - if verbose_align_log: -- print "didn't find start-align for %s" % str(self) -+ print ("didn't find start-align for %s" % str(self)) - log.append(best_log) - return None - -@@ -900,7 +900,7 @@ class SwitchType(ComplexType): - # aux function for unchecked_get_alignment_after - def get_align_for_selected_case_field(self, case_field, start_align, callstack, log): - if verbose_align_log: -- print "get_align_for_selected_case_field: %s, case_field = %s" % (str(self), str(case_field)) -+ print ("get_align_for_selected_case_field: %s, case_field = %s" % (str(self), str(case_field))) - total_align = start_align - for field in self.bitcases: - my_callstack = callstack[:] --- -2.11.1 - diff --git a/gnu/packages/patches/xcb-proto-python3-whitespace.patch b/gnu/packages/patches/xcb-proto-python3-whitespace.patch deleted file mode 100644 index f0509138b2..0000000000 --- a/gnu/packages/patches/xcb-proto-python3-whitespace.patch +++ /dev/null @@ -1,217 +0,0 @@ -Fixes compatibility issue with python > 3.5. - -Patch copied from upstream source repository: - -https://cgit.freedesktop.org/xcb/proto/commit/?id=ea7a3ac6c658164690e0febb55f4467cb9e0bcac - -From ea7a3ac6c658164690e0febb55f4467cb9e0bcac Mon Sep 17 00:00:00 2001 -From: Thomas Klausner <wiz@NetBSD.org> -Date: Thu, 19 May 2016 17:30:04 +0200 -Subject: [PATCH] Make whitespace use consistent. - -At least python-3.5.x complains about this forcefully. - -Signed-off-by: Thomas Klausner <wiz@NetBSD.org> -Signed-off-by: Uli Schlachter <psychon@znc.in> ---- - xcbgen/align.py | 96 ++++++++++++++++++++++++++++----------------------------- - 1 file changed, 48 insertions(+), 48 deletions(-) - -diff --git a/xcbgen/align.py b/xcbgen/align.py -index 5e31838..d4c12ee 100644 ---- a/xcbgen/align.py -+++ b/xcbgen/align.py -@@ -16,12 +16,12 @@ class Alignment(object): - return self.align == other.align and self.offset == other.offset - - def __str__(self): -- return "(align=%d, offset=%d)" % (self.align, self.offset) -+ return "(align=%d, offset=%d)" % (self.align, self.offset) - - @staticmethod - def for_primitive_type(size): -- # compute the required start_alignment based on the size of the type -- if size % 8 == 0: -+ # compute the required start_alignment based on the size of the type -+ if size % 8 == 0: - # do 8-byte primitives require 8-byte alignment in X11? - return Alignment(8,0) - elif size % 4 == 0: -@@ -33,7 +33,7 @@ class Alignment(object): - - - def align_after_fixed_size(self, size): -- new_offset = (self.offset + size) % self.align -+ new_offset = (self.offset + size) % self.align - return Alignment(self.align, new_offset) - - -@@ -41,7 +41,7 @@ class Alignment(object): - ''' - Assuming the given external_align, checks whether - self is fulfilled for all cases. -- Returns True if yes, False otherwise. -+ Returns True if yes, False otherwise. - ''' - if self.align == 1 and self.offset == 0: - # alignment 1 with offset 0 is always fulfilled -@@ -55,9 +55,9 @@ class Alignment(object): - # the external align guarantees less alignment -> not guaranteed - return False - -- if external_align.align % self.align != 0: -+ if external_align.align % self.align != 0: - # the external align cannot be divided by our align -- # -> not guaranteed -+ # -> not guaranteed - # (this can only happen if there are alignments that are not - # a power of 2, which is highly discouraged. But better be - # safe and check for it) -@@ -72,7 +72,7 @@ class Alignment(object): - - def combine_with(self, other): - # returns the alignment that is guaranteed when -- # both, self or other, can happen -+ # both, self or other, can happen - new_align = gcd(self.align, other.align) - new_offset_candidate1 = self.offset % new_align - new_offset_candidate2 = other.offset % new_align -@@ -83,8 +83,8 @@ class Alignment(object): - new_align = gcd(new_align, offset_diff) - new_offset_candidate1 = self.offset % new_align - new_offset_candidate2 = other.offset % new_align -- assert new_offset_candidate1 == new_offset_candidate2 -- new_offset = new_offset_candidate1 -+ assert new_offset_candidate1 == new_offset_candidate2 -+ new_offset = new_offset_candidate1 - # return the result - return Alignment(new_align, new_offset) - -@@ -92,44 +92,44 @@ class Alignment(object): - class AlignmentLog(object): - - def __init__(self): -- self.ok_list = [] -- self.fail_list = [] -- self.verbosity = 1 -+ self.ok_list = [] -+ self.fail_list = [] -+ self.verbosity = 1 - - def __str__(self): -- result = "" -+ result = "" - -- # output the OK-list -- for (align_before, field_name, type_obj, callstack, align_after) in self.ok_list: -- stacksize = len(callstack) -+ # output the OK-list -+ for (align_before, field_name, type_obj, callstack, align_after) in self.ok_list: -+ stacksize = len(callstack) - indent = ' ' * stacksize -- if self.ok_callstack_is_relevant(callstack): -+ if self.ok_callstack_is_relevant(callstack): - if field_name is None or field_name == "": -- result += (" %sok: %s:\n\t%sbefore: %s, after: %s\n" -- % (indent, str(type_obj), indent, str(align_before), str(align_after))) -- else: -- result += (" %sok: field \"%s\" in %s:\n\t%sbefore: %s, after: %s\n" -- % (indent, str(field_name), str(type_obj), -- indent, str(align_before), str(align_after))) -+ result += (" %sok: %s:\n\t%sbefore: %s, after: %s\n" -+ % (indent, str(type_obj), indent, str(align_before), str(align_after))) -+ else: -+ result += (" %sok: field \"%s\" in %s:\n\t%sbefore: %s, after: %s\n" -+ % (indent, str(field_name), str(type_obj), -+ indent, str(align_before), str(align_after))) - if self.verbosity >= 1: -- result += self.callstack_to_str(indent, callstack) -+ result += self.callstack_to_str(indent, callstack) - -- # output the fail-list -- for (align_before, field_name, type_obj, callstack, reason) in self.fail_list: -- stacksize = len(callstack) -+ # output the fail-list -+ for (align_before, field_name, type_obj, callstack, reason) in self.fail_list: -+ stacksize = len(callstack) - indent = ' ' * stacksize -- if field_name is None or field_name == "": -- result += (" %sfail: align %s is incompatible with\n\t%s%s\n\t%sReason: %s\n" -- % (indent, str(align_before), indent, str(type_obj), indent, reason)) -- else: -- result += (" %sfail: align %s is incompatible with\n\t%sfield \"%s\" in %s\n\t%sReason: %s\n" -- % (indent, str(align_before), indent, str(field_name), str(type_obj), indent, reason)) -+ if field_name is None or field_name == "": -+ result += (" %sfail: align %s is incompatible with\n\t%s%s\n\t%sReason: %s\n" -+ % (indent, str(align_before), indent, str(type_obj), indent, reason)) -+ else: -+ result += (" %sfail: align %s is incompatible with\n\t%sfield \"%s\" in %s\n\t%sReason: %s\n" -+ % (indent, str(align_before), indent, str(field_name), str(type_obj), indent, reason)) - - if self.verbosity >= 1: -- result += self.callstack_to_str(indent, callstack) -+ result += self.callstack_to_str(indent, callstack) - - -- return result -+ return result - - - def callstack_to_str(self, indent, callstack): -@@ -137,41 +137,41 @@ class AlignmentLog(object): - for stack_elem in callstack: - result += "\t %s%s\n" % (indent, str(stack_elem)) - result += "\t%s]\n" % indent -- return result -+ return result - - - def ok_callstack_is_relevant(self, ok_callstack): - # determine whether an ok callstack is relevant for logging -- if self.verbosity >= 2: -- return True -+ if self.verbosity >= 2: -+ return True - - # empty callstacks are always relevant -- if len(ok_callstack) == 0: -+ if len(ok_callstack) == 0: - return True - -- # check whether the ok_callstack is a subset or equal to a fail_callstack -+ # check whether the ok_callstack is a subset or equal to a fail_callstack - for (align_before, field_name, type_obj, fail_callstack, reason) in self.fail_list: - if len(ok_callstack) <= len(fail_callstack): - zipped = zip(ok_callstack, fail_callstack[:len(ok_callstack)]) -- is_subset = all([i == j for i, j in zipped]) -- if is_subset: -+ is_subset = all([i == j for i, j in zipped]) -+ if is_subset: - return True - - return False - - - def ok(self, align_before, field_name, type_obj, callstack, align_after): -- self.ok_list.append((align_before, field_name, type_obj, callstack, align_after)) -+ self.ok_list.append((align_before, field_name, type_obj, callstack, align_after)) - - def fail(self, align_before, field_name, type_obj, callstack, reason): -- self.fail_list.append((align_before, field_name, type_obj, callstack, reason)) -+ self.fail_list.append((align_before, field_name, type_obj, callstack, reason)) - - def append(self, other): -- self.ok_list.extend(other.ok_list) -- self.fail_list.extend(other.fail_list) -+ self.ok_list.extend(other.ok_list) -+ self.fail_list.extend(other.fail_list) - - def ok_count(self): -- return len(self.ok_list) -+ return len(self.ok_list) - - - --- -2.11.1 - diff --git a/gnu/packages/pcre.scm b/gnu/packages/pcre.scm index ee853d5015..5719b7bb45 100644 --- a/gnu/packages/pcre.scm +++ b/gnu/packages/pcre.scm @@ -6,6 +6,7 @@ ;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -75,7 +76,7 @@ POSIX regular expression API.") (define-public pcre2 (package (name "pcre2") - (version "10.23") + (version "10.31") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/pcre/pcre2/" @@ -83,9 +84,7 @@ POSIX regular expression API.") (sha256 (base32 - "0vn5g0mkkp99mmzpissa06hpyj6pk9s4mlwbjqrjvw3ihy8rpiyz")) - (patches (search-patches "pcre2-CVE-2017-7186.patch" - "pcre2-CVE-2017-8786.patch")))) + "1b389pzw91k1hzydsh4smdsxyppwz4pv74m3nrvy8rda0j3m6zg0")))) (build-system gnu-build-system) (inputs `(("bzip2" ,bzip2) ("readline" ,readline) diff --git a/gnu/packages/sawfish.scm b/gnu/packages/sawfish.scm index ede725877d..4eced74f22 100644 --- a/gnu/packages/sawfish.scm +++ b/gnu/packages/sawfish.scm @@ -47,13 +47,6 @@ (base32 "1bmcjl1x1rdh514q9z3hzyjmjmwwwkziipjpjsl301bwmiwrd8a8")))) (build-system gnu-build-system) - (arguments - '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - ;; The 0.92.6 tarball was not produced by 'make dist' - ;; and lacks generated files. Sadness. - (zero? (system* "autoreconf" "-vfi"))))))) (native-inputs `(("makeinfo" ,texinfo) ("pkg-config" ,pkg-config) diff --git a/gnu/packages/tls.scm b/gnu/packages/tls.scm index 45f5255665..a7944c2ce7 100644 --- a/gnu/packages/tls.scm +++ b/gnu/packages/tls.scm @@ -4,7 +4,7 @@ ;;; Copyright © 2014 Ian Denhardt <ian@zenhack.net> ;;; Copyright © 2013, 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2015 David Thompson <davet@gnu.org> -;;; Copyright © 2015, 2016, 2017 Leo Famulari <leo@famulari.name> +;;; Copyright © 2015, 2016, 2017, 2018 Leo Famulari <leo@famulari.name> ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016, 2017 ng0 <ng0@infotropique.org> ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com> @@ -65,8 +65,7 @@ (define-public libtasn1 (package (name "libtasn1") - (version "4.12") - (replacement libtasn1/fixed) + (version "4.13") (source (origin (method url-fetch) @@ -74,8 +73,7 @@ version ".tar.gz")) (sha256 (base32 - "0ls7jdq3y5fnrwg0pzhq11m21r8pshac2705bczz6mqjc8pdllv7")) - (patches (search-patches "libtasn1-CVE-2017-10790.patch")))) + "1jlc1iahj8k3haz28j55nzg7sgni5h41vqy461i1bpbx6668wlky")))) (build-system gnu-build-system) (native-inputs `(("perl" ,perl))) (home-page "https://www.gnu.org/software/libtasn1/") @@ -87,14 +85,6 @@ networking, allowing for formal validation of data according to some specifications.") (license license:lgpl2.0+))) -(define libtasn1/fixed - (package - (inherit libtasn1) - (source (origin - (inherit (package-source libtasn1)) - (patches (search-patches "libtasn1-CVE-2017-10790.patch" - "libtasn1-CVE-2018-6003.patch")))))) - (define-public asn1c (package (name "asn1c") @@ -155,7 +145,7 @@ living in the same process.") (define-public gnutls (package (name "gnutls") - (version "3.5.13") + (version "3.5.18") (source (origin (method url-fetch) (uri @@ -169,7 +159,7 @@ living in the same process.") "gnutls-skip-pkgconfig-test.patch")) (sha256 (base32 - "15ihq6p0hnnhs8cnjrkj40dmlcaa1jjg8xg0g2ydbnlqs454ixbr")))) + "0d02x28fwkkx7xzn7807nww6idchizzq3plx8sfcyiw7wzclh8mf")))) (build-system gnu-build-system) (arguments `(; Ensure we don't keep a reference to this buggy software. diff --git a/gnu/packages/version-control.scm b/gnu/packages/version-control.scm index a3f4a4dd4b..2907999fca 100644 --- a/gnu/packages/version-control.scm +++ b/gnu/packages/version-control.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org> ;;; Copyright © 2013 Cyril Roelandt <tipecaml@gmail.com> -;;; Copyright © 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2013, 2014 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2015, 2016 Mathieu Lirzin <mthl@gnu.org> ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> @@ -1539,11 +1539,6 @@ output of the 'git' command.") (base32 "1ydis4y0amkgfr4y60sn076f1l41ya2kn89kfd9fqf44f9ccgb5r")))) (build-system gnu-build-system) - (arguments - '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi"))))))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake))) (home-page "https://github.com/0-wiz-0/findnewest/releases") @@ -1615,7 +1610,7 @@ repository\" with git-annex.") (define-public fossil (package (name "fossil") - (version "2.4") + (version "2.5") (source (origin (method url-fetch) @@ -1629,7 +1624,7 @@ repository\" with git-annex.") "fossil-src-" version ".tar.gz"))) (sha256 (base32 - "0add35lk2ac4qg29d7ygj7pskv8lfln33f3kgf6x3548msv9hd6j")))) + "1lxawkhr1ki9fqw8076fxib2b1w673449yzb6vxjshqzh5h77c7r")))) (build-system gnu-build-system) (native-inputs `(("tcl" ,tcl) ;for configuration only diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm index 6c9769d9fa..bf5999177e 100644 --- a/gnu/packages/video.scm +++ b/gnu/packages/video.scm @@ -206,8 +206,7 @@ old-fashioned output methods with powerful ascii-art renderer.") (modify-phases %standard-phases ;; XXX We need to run ./bootstrap because of the build ;; system fixes above. - (add-after - 'unpack 'bootstrap + (replace 'bootstrap (lambda _ (zero? (system* "sh" "bootstrap"))))))) (home-page "http://liba52.sourceforge.net/") (synopsis "ATSC A/52 stream decoder") @@ -2251,7 +2250,7 @@ supported players in addition to this package.") `(#:tests? #f ;tests require Ruby and claim to be unsupported #:phases (modify-phases %standard-phases - (add-before 'patch-source-shebangs 'bootstrap-gtk + (replace 'bootstrap ;; Run bootstrap ahead of time so that shebangs get patched. (lambda _ (setenv "CONFIG_SHELL" (which "sh")) @@ -2770,7 +2769,7 @@ It counts more than 100 plugins.") ("sqlite" ,sqlite))) (arguments '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ (patch-shebang "version.sh") (invoke "autoreconf" "-vfi")))) diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm index ceb7d9b7c7..6db59daa2c 100644 --- a/gnu/packages/web.scm +++ b/gnu/packages/web.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013, 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013 Aljosha Papsch <misc@rpapsch.de> -;;; Copyright © 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2014, 2015, 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2015, 2016, 2017, 2018 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2018 Raoul Jean Pierre Bonnal <ilpuccio.febo@gmail.com> @@ -414,12 +414,7 @@ APIs.") (build-system gnu-build-system) (arguments `(#:tests? #f ; no tests included - #:make-flags (list "CC=gcc") - #:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vif"))))))) + #:make-flags (list "CC=gcc"))) (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake) @@ -854,7 +849,7 @@ UTS#46.") (build-system gnu-build-system) (arguments '(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda* (#:key inputs #:allow-other-keys) ;; configure.in and Makefile.am aren't in the root of the ;; source tree. @@ -4033,11 +4028,7 @@ and vice-versa.") "1bgg2kbj311pqdzw2v33za7k66g1rv44kkvvnz2gnpaasi9k0ii8")))) (build-system gnu-build-system) (arguments - `(#:tests? #f ; tests require bundling googletest sources - #:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "sh" "autogen.sh"))))))) + `(#:tests? #f)) ;tests require bundling googletest sources ;; The release tarball lacks the generated files. (native-inputs `(("autoconf" ,autoconf) diff --git a/gnu/packages/wget.scm b/gnu/packages/wget.scm index c6a319965a..06668d287b 100644 --- a/gnu/packages/wget.scm +++ b/gnu/packages/wget.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012 Nikita Karetnikov <nikita@karetnikov.org> -;;; Copyright © 2014, 2015, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2014, 2015, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com> ;;; @@ -140,7 +140,7 @@ online pastebin services.") (build-system gnu-build-system) (arguments `(#:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ ;; Make sure all the files are writable so that ./bootstrap ;; can proceed. diff --git a/gnu/packages/wm.scm b/gnu/packages/wm.scm index b38b3caa25..f12eedab43 100644 --- a/gnu/packages/wm.scm +++ b/gnu/packages/wm.scm @@ -8,7 +8,7 @@ ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Al McElrath <hello@yrns.org> ;;; Copyright © 2016 Carlo Zancanaro <carlo@zancanaro.id.au> -;;; Copyright © 2016, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016, 2017, 2018 ng0 <ng0@crash.cx> ;;; Copyright © 2016 doncatnip <gnopap@gmail.com> ;;; Copyright © 2016 Ivan Vilata i Balaguer <ivan@selidor.net> @@ -355,12 +355,7 @@ prompt.") "119xvdm4r6irqk0mar80hx6s8ydw26y35h7712rd7nbg7pb7i053")))) (build-system gnu-build-system) (arguments - `(#:tests? #f ;No tests included. - #:phases - (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi"))))))) + `(#:tests? #f)) ;no tests included (inputs `(("xcb-util-image" ,xcb-util-image) ("xcb-util" ,xcb-util) diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm index 07a9b390fa..87d14e20a4 100644 --- a/gnu/packages/xdisorg.scm +++ b/gnu/packages/xdisorg.scm @@ -3,7 +3,7 @@ ;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2014, 2015, 2016 Alex Kost <alezost@gmail.com> -;;; Copyright © 2013, 2015, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2013, 2015, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015, 2016 Mathieu Lirzin <mthl@gnu.org> ;;; Copyright © 2015 Alexander I.Grafov <grafov@gmail.com> ;;; Copyright © 2015 Andy Wingo <wingo@igalia.com> @@ -136,12 +136,7 @@ program.") "0n7pczk9vv30zf8qfln8ba3hnif9yfdxg0m84djac469wc28hnya")))) (build-system gnu-build-system) (arguments - '(#:tests? #f ; There is no test suite - #:phases - (modify-phases %standard-phases - ;; Since version 0.13, bootstrapped releases are no longer available. - (add-after 'unpack 'bootstrap - (lambda _ (zero? (system* "autoreconf" "-v"))))))) + '(#:tests? #f)) ;there is no test suite (native-inputs `(("autoconf" ,autoconf) ("automake" ,automake))) diff --git a/gnu/packages/xml.scm b/gnu/packages/xml.scm index 729fa56a30..293b47a653 100644 --- a/gnu/packages/xml.scm +++ b/gnu/packages/xml.scm @@ -105,14 +105,14 @@ hierarchical form with variable field lengths.") (define-public libxml2 (package (name "libxml2") - (version "2.9.7") + (version "2.9.8") (source (origin (method url-fetch) (uri (string-append "ftp://xmlsoft.org/libxml2/libxml2-" version ".tar.gz")) (sha256 (base32 - "034hylzspvkm0p4bczqbf8q05a7r2disr8dz725x4bin61ymwg7n")))) + "0ci7is75bwqqw2p32vxvrk6ds51ik7qgx73m920rakv5jlayax0b")))) (build-system gnu-build-system) (home-page "http://www.xmlsoft.org/") (synopsis "C parser for XML") @@ -1233,7 +1233,7 @@ files. It is designed to be fast and to handle large input files.") `(#:phases (modify-phases %standard-phases ;; Bootstrapping is required in order to fix the test driver script. - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ (zero? (system* "bash" "bootstrap"))))))) (native-inputs diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm index 46a9a3b85f..d167269c24 100644 --- a/gnu/packages/xorg.scm +++ b/gnu/packages/xorg.scm @@ -2,7 +2,7 @@ ;;; Copyright © 2013, 2014 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2014, 2015, 2017 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014, 2015 Eric Bavier <bavier@member.fsf.org> -;;; Copyright © 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2015, 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> ;;; Copyright © 2016 Mathieu Lirzin <mthl@gnu.org> ;;; Copyright © 2015 Cyrill Schenkel <cyrill.schenkel@gmail.com> @@ -1849,7 +1849,7 @@ management to participate in an X11R6 session.") (define-public util-macros (package (name "util-macros") - (version "1.19.1") + (version "1.19.2") (source (origin (method url-fetch) @@ -1859,25 +1859,26 @@ management to participate in an X11R6 session.") ".tar.bz2")) (sha256 (base32 - "19h6wflpmh7xxqr6lk5z8pds6r9r0dn7ijbvaacymx2q0m05km0q")))) + "04p7ydqxgq37jklnfj18b70zsifiz4h50wvrk94i2112mmv37r6p")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config))) (arguments - `(#:phases (alist-cons-after - 'unpack 'fix-makefile-in - (lambda _ - (substitute* "Makefile.in" - ;; Install xorg-macros.pc in PREFIX/lib/pkgconfig, - ;; not PREFIX/share/pkgconfig. - (("\\$\\(datadir\\)/pkgconfig") "$(libdir)/pkgconfig"))) - (alist-cons-after - 'install 'post-install-cleanup - (lambda* (#:key outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out"))) - (with-directory-excursion out - (delete-file "share/util-macros/INSTALL") - (rmdir "share/util-macros")))) - %standard-phases)))) + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'fix-makefile-in + (lambda _ + (substitute* "Makefile.in" + ;; Install xorg-macros.pc in PREFIX/lib/pkgconfig, + ;; not PREFIX/share/pkgconfig. + (("\\$\\(datadir\\)/pkgconfig") "$(libdir)/pkgconfig")) + #t)) + (add-after 'install 'post-install-cleanup + (lambda* (#:key outputs #:allow-other-keys) + (let ((out (assoc-ref outputs "out"))) + (with-directory-excursion out + (delete-file "share/util-macros/INSTALL") + (rmdir "share/util-macros")) + #t)))))) (home-page "https://www.x.org/wiki/") (synopsis "Xorg autoconf macros") (description @@ -2089,7 +2090,7 @@ emulate a TI-30 or an HP-10C.") (define-public xcb-proto (package (name "xcb-proto") - (version "1.12") + (version "1.13") (source (origin (method url-fetch) @@ -2099,10 +2100,7 @@ emulate a TI-30 or an HP-10C.") ".tar.bz2")) (sha256 (base32 - "01j91946q8f34l1mbvmmgvyc393sm28ym4lxlacpiav4qsjan8jr")) - (patches - (search-patches "xcb-proto-python3-whitespace.patch" - "xcb-proto-python3-print.patch")))) + "1qdxw9syhbvswiqj5dvj278lrmfhs81apzmvx6205s4vcqg7563v")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config) ("python" ,python-minimal-wrapper))) @@ -2767,11 +2765,7 @@ framebuffer device.") `(#:configure-flags (list (string-append "--with-xorg-conf-dir=" (assoc-ref %outputs "out") - "/share/X11/xorg.conf.d")) - #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi"))))))) + "/share/X11/xorg.conf.d")))) (home-page "https://www.x.org/wiki/") (synopsis "Adreno video driver for X server") (description @@ -2926,11 +2920,7 @@ X server.") (string-prefix? "x86_64-" system))) %supported-systems)) (arguments - '(#:configure-flags '("--with-default-accel=uxa") - #:phases (modify-phases %standard-phases - (add-after 'unpack 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi"))))))) + '(#:configure-flags '("--with-default-accel=uxa"))) (home-page "https://www.x.org/wiki/") (synopsis "Intel video driver for X server") (description @@ -5044,7 +5034,7 @@ protocol.") (define-public libxcb (package (name "libxcb") - (version "1.12") + (version "1.13") (source (origin (method url-fetch) @@ -5052,9 +5042,7 @@ protocol.") name "-" version ".tar.bz2")) (sha256 (base32 - "0nvv0la91cf8p5qqlb3r5xnmg1jn2wphn4fb5jfbr6byqsvv3psa")) - (patches - (search-patches "libxcb-python-3.5-compat.patch")))) + "1ahxhmdqp4bhb90zmc275rmf5wixqra4bnw9pqnzyl1w3598g30q")))) (build-system gnu-build-system) (propagated-inputs `(("libpthread-stubs" ,libpthread-stubs) diff --git a/gnu/packages/zile.scm b/gnu/packages/zile.scm index fd3d168b3d..858117de28 100644 --- a/gnu/packages/zile.scm +++ b/gnu/packages/zile.scm @@ -114,7 +114,7 @@ default Emacs configuration, but it carries a much lighter feature set.") (substitute-keyword-arguments (package-arguments zile) ((#:phases phases) `(modify-phases ,phases - (add-after 'unpack 'bootstrap + (replace 'bootstrap (lambda _ ;; Make sure all the files are writable so that ./bootstrap ;; can proceed. |