diff options
Diffstat (limited to 'gnu/packages/python.scm')
| -rw-r--r-- | gnu/packages/python.scm | 106 |
1 files changed, 61 insertions, 45 deletions
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index 2fcdbcc211..23afec7950 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -33,7 +33,6 @@ #:use-module (gnu packages) #:use-module (gnu packages compression) #:use-module (gnu packages databases) - #:use-module (gnu packages elf) #:use-module (gnu packages fontutils) #:use-module (gnu packages gdbm) #:use-module (gnu packages gcc) @@ -134,7 +133,8 @@ (sqlite (assoc-ref %build-inputs "sqlite")) (openssl (assoc-ref %build-inputs "openssl")) (readline (assoc-ref %build-inputs "readline")) - (zlib (assoc-ref %build-inputs "zlib"))) + (zlib (assoc-ref %build-inputs "zlib")) + (out (assoc-ref %outputs "out"))) (list "--enable-shared" ; allow embedding "--with-system-ffi" ; build ctypes (string-append "CPPFLAGS=" @@ -151,43 +151,27 @@ "-L" sqlite "/lib " "-L" openssl "/lib " "-L" readline "/lib " - "-L" zlib "/lib"))) - - #:modules ((guix build gnu-build-system) - (guix build utils) - (guix build rpath) - (srfi srfi-26)) - #:imported-modules ((guix build gnu-build-system) - (guix build utils) - (guix build rpath)) + "-L" zlib "/lib " + "-Wl,-rpath=" out "/lib"))) #:phases - (alist-cons-after - 'strip 'add-lib-to-runpath - (lambda* (#:key outputs #:allow-other-keys) - (let* ((out (assoc-ref outputs "out")) - (lib (string-append out "/lib"))) - ;; Add LIB to the RUNPATH of all the executables. - (with-directory-excursion out - (for-each (cut augment-rpath <> lib) - (find-files "bin" ".*"))))) + (alist-cons-before + 'configure 'patch-lib-shells + (lambda _ + ;; Filter for existing files, since some may not exist in all + ;; versions of python that are built with this recipe. + (substitute* (filter file-exists? + '("Lib/subprocess.py" + "Lib/popen2.py" + "Lib/distutils/tests/test_spawn.py" + "Lib/test/test_subprocess.py")) + (("/bin/sh") (which "sh")))) (alist-cons-before - 'configure 'patch-lib-shells + 'check 'pre-check (lambda _ - ;; Filter for existing files, since some may not exist in all - ;; versions of python that are built with this recipe. - (substitute* (filter file-exists? - '("Lib/subprocess.py" - "Lib/popen2.py" - "Lib/distutils/tests/test_spawn.py" - "Lib/test/test_subprocess.py")) - (("/bin/sh") (which "sh")))) - (alist-cons-before - 'check 'pre-check - (lambda _ - ;; 'Lib/test/test_site.py' needs a valid $HOME - (setenv "HOME" (getcwd))) - %standard-phases))))) + ;; 'Lib/test/test_site.py' needs a valid $HOME + (setenv "HOME" (getcwd))) + %standard-phases)))) (inputs `(("bzip2" ,bzip2) ("gdbm" ,gdbm) @@ -195,8 +179,7 @@ ("sqlite" ,sqlite) ; for sqlite extension ("openssl" ,openssl) ("readline" ,readline) - ("zlib" ,zlib) - ("patchelf" ,patchelf))) ; for (guix build rpath) + ("zlib" ,zlib))) (native-inputs `(("pkg-config" ,pkg-config))) (native-search-paths @@ -230,14 +213,8 @@ data types.") (sha256 (base32 "1rdncc7g8g6f3lfdg33rli1yffbiq8z283xy4f5ksl1l8i49psdb")))) - (arguments - (let ((args `(#:modules ((guix build gnu-build-system) - (guix build utils) - (srfi srfi-1) - (srfi srfi-26)) - ,@(package-arguments python-2)))) - (substitute-keyword-arguments args - ((#:tests? _) #t)))) + (arguments (substitute-keyword-arguments (package-arguments python-2) + ((#:tests? _) #t))) (native-search-paths (list (search-path-specification (variable "PYTHONPATH") @@ -324,6 +301,45 @@ etc. ") (define-public python2-babel (package-with-python2 python-babel)) +(define-public python-h5py + (package + (name "python-h5py") + (version "2.4.0") + (source + (origin + (method url-fetch) + (uri (string-append "https://pypi.python.org/packages/source/h/h5py/h5py-" + version ".tar.gz")) + (sha256 + (base32 + "0q4f9l8grf6pwp64xbv8bmyxx416s7h4522nnxac056ap3savbps")))) + (build-system python-build-system) + (inputs + `(("python-cython" ,python-cython) + ("python-numpy" ,python-numpy) + ("hdf5" ,hdf5))) + (native-inputs + `(("python-setuptools" ,python-setuptools))) + (arguments `(#:tests? #f)) ; no test target + (home-page "http://www.h5py.org/") + (synopsis "Read and write HDF5 files from Python") + (description + "The h5py package provides both a high- and low-level interface to the +HDF5 library from Python. The low-level interface is intended to be a +complete wrapping of the HDF5 API, while the high-level component supports +access to HDF5 files, datasets and groups using established Python and NumPy +concepts.") + (license bsd-3))) + +(define-public python2-h5py + (let ((h5py (package-with-python2 python-h5py))) + (package (inherit h5py) + (inputs + `(("python2-numpy" ,python2-numpy) + ,@(alist-delete + "python-numpy" + (package-inputs h5py))))))) + (define-public python-lockfile (package (name "python-lockfile") |