diff options
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 443 |
1 files changed, 102 insertions, 341 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 4e0676fc2d..4398211afa 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -44,7 +44,7 @@ ;;; Copyright © 2017, 2018 Kei Kebreau <kkebreau@posteo.net> ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com> ;;; Copyright © 2017 Muriithi Frederick Muriuki <fredmanglis@gmail.com> -;;; Copyright © 2017 Brendan Tildesley <brendan.tildesley@openmailbox.org> +;;; Copyright © 2017, 2019 Brendan Tildesley <mail@brendan.scot> ;;; Copyright © 2018 Ethan R. Jones <ethanrjones97@gmail.com ;;; Copyright © 2018 Fis Trivial <ybbs.daans@hotmail.com> ;;; Copyright © 2018 Vijayalakshmi Vedantham <vijimay12@gmail.com> @@ -59,6 +59,7 @@ ;;; Copyright © 2018 Vagrant Cascadian <vagrant@debian.org> ;;; Copyright © 2019 Brett Gilio <brettg@posteo.net> ;;; Copyright © 2019 Sam <smbaines8@gmail.com> +;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us> ;;; ;;; This file is part of GNU Guix. ;;; @@ -124,6 +125,7 @@ #:use-module (gnu packages sdl) #:use-module (gnu packages search) #:use-module (gnu packages shells) + #:use-module (gnu packages sphinx) #:use-module (gnu packages ssh) #:use-module (gnu packages terminals) #:use-module (gnu packages tex) @@ -2503,174 +2505,6 @@ reStructuredText.") (define-public python2-pygments (package-with-python2 python-pygments)) -(define-public python-sphinxcontrib-websupport - (package - (name "python-sphinxcontrib-websupport") - (version "1.1.0") - (source (origin - (method url-fetch) - (uri (pypi-uri "sphinxcontrib-websupport" version)) - (sha256 - (base32 - "1ff3ix76xi1y6m99qxhaq5161ix9swwzydilvdya07mgbcvpzr4x")))) - (build-system python-build-system) - (arguments - ;; FIXME: Tests depend on Sphinx, which depends on this. - `(#:tests? #f)) - (home-page "http://sphinx-doc.org/") - (synopsis "Sphinx API for web applications") - (description "This package provides a Python API to easily integrate -Sphinx documentation into your web application. It provides tools to -integrate Sphinx documents in web templates and to handle searches.") - (license license:bsd-3))) - -(define-public python2-sphinxcontrib-websupport - (package-with-python2 python-sphinxcontrib-websupport)) - -(define-public python-sphinx - (package - (name "python-sphinx") - (version "1.7.7") - (source - (origin - (method url-fetch) - (uri (pypi-uri "Sphinx" version)) - (sha256 - (base32 - "0pkkbfj7cl157q550gcs45am5y78ps0h7q6455d64s1zmw01jlvi")))) - (build-system python-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda _ - ;; Requires Internet access. - (delete-file "tests/test_build_linkcheck.py") - (substitute* "tests/test_build_latex.py" - (("@pytest.mark.sphinx\\('latex', testroot='images'\\)") - "@pytest.mark.skip()")) - (when (which "python") - ;; XXX: These tests are broken when using Python2: - ;; <https://github.com/sphinx-doc/sphinx/issues/4710>. - (delete-file "tests/test_api_translator.py") - (delete-file "tests/test_setup_command.py")) - (invoke "make" "test")))))) - (propagated-inputs - `(("python-imagesize" ,python-imagesize) - ("python-sphinx-alabaster-theme" - ,python-sphinx-alabaster-theme) - ("python-babel" ,python-babel) - ("python-snowballstemmer" ,python-snowballstemmer) - ("python-docutils" ,python-docutils) - ("python-jinja2" ,python-jinja2) - ("python-packaging" ,python-packaging) - ("python-pygments" ,python-pygments) - ("python-requests" ,python-requests) - ("python-six" ,python-six) - ("python-sphinxcontrib-websupport" ,python-sphinxcontrib-websupport))) - (native-inputs - `(("graphviz" ,graphviz) - ("imagemagick" ,imagemagick) ;for "convert" - ("python-html5lib" ,python-html5lib) - ("python-mock" ,python-mock) - ("python-nose" ,python-nose) - ("python-pytest" ,python-pytest))) - (home-page "http://sphinx-doc.org/") - (synopsis "Python documentation generator") - (description "Sphinx is a tool that makes it easy to create documentation -for Python projects or other documents consisting of multiple reStructuredText -sources.") - (license license:bsd-3) - (properties `((python2-variant . ,(delay python2-sphinx)))))) - -(define-public python2-sphinx - (let ((base (package-with-python2 (strip-python2-variant python-sphinx)))) - (package - (inherit base) - (native-inputs `(("python2-mock" ,python2-mock) - ("python2-enum34" ,python2-enum34) - ,@(package-native-inputs base))) - (propagated-inputs `(("python2-pytz" ,python2-pytz) - ("python2-typing" ,python2-typing) - ,@(package-propagated-inputs base)))))) - -(define-public python-sphinx-gallery - (package - (name "python-sphinx-gallery") - (version "0.1.13") - (source (origin - (method url-fetch) - (uri (string-append "https://github.com/sphinx-gallery/sphinx-gallery" - "/archive/v" version ".tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) - (sha256 - (base32 - "03fs99mcb1r7qp0xixqv07vcz98sk21yq19ffdysi0infdcpzfkd")))) - (build-system python-build-system) - (arguments - ;; FIXME: Tests attempt to download <https://docs.python.org/3/objects.inv>, - ;; <https://docs.scipy.org/doc/numpy/objects.inv>, and - ;; <https://matplotlib.org/objects.inv>. - `(#:tests? #f)) - (native-inputs - `(("python-pytest-runner" ,python-pytest-runner))) - (home-page "https://sphinx-gallery.github.io/") - (synopsis "Generate an examples gallery automatically") - (description - "@code{sphinx_gallery} is a Sphinx extension that builds an HTML version -from any set of Python scripts and puts it into an examples gallery.") - (license license:bsd-3))) - -(define-public python2-sphinx-gallery - (package-with-python2 python-sphinx-gallery)) - -(define-public python-sphinx-rtd-theme - (package - (name "python-sphinx-rtd-theme") - (version "0.2.4") - (source - (origin - (method url-fetch) - (uri (pypi-uri "sphinx_rtd_theme" version)) - (sha256 - (base32 - "05rlhjzdyapr2w74jjs7mrm8hi69qskcr5vya9f9drpsys7lpxrd")))) - (build-system python-build-system) - (arguments '(#:tests? #f)) ; No tests. - (propagated-inputs - `(("python-sphinx" ,python-sphinx))) - (home-page "https://github.com/snide/sphinx_rtd_theme/") - (synopsis "ReadTheDocs.org theme for Sphinx") - (description "A theme for Sphinx used by ReadTheDocs.org.") - (license license:expat))) - -(define-public python2-sphinx-rtd-theme - (package-with-python2 python-sphinx-rtd-theme)) - -(define-public python-guzzle-sphinx-theme - (package - (name "python-guzzle-sphinx-theme") - (version "0.7.11") - (source - (origin - (method url-fetch) - (uri (pypi-uri "guzzle_sphinx_theme" version)) - (sha256 - (base32 - "1rnkzrrsbnifn3vsb4pfaia3nlvgvw6ndpxp7lzjrh23qcwid34v")))) - (build-system python-build-system) - (propagated-inputs - `(("python-sphinx" ,python-sphinx))) - (home-page "https://github.com/guzzle/guzzle_sphinx_theme") - (synopsis "Sphinx theme used by Guzzle") - (description "This package provides guzzle_sphinx_theme, a theme for the -Sphinx documentation system, used by @uref{http://docs.guzzlephp.org, Guzzle} -and several other projects.") - (license license:expat))) - -(define-public python2-guzzle-sphinx-theme - (package-with-python2 python-guzzle-sphinx-theme)) - (define-public python-bumpversion (package (name "python-bumpversion") @@ -3062,7 +2896,7 @@ Language (TOML) configuration files.") "https://github.com/palantir/python-jsonrpc-server") (synopsis "JSON RPC 2.0 server library") (description - "This packages provides a JSON RPC 2.0 server library for Python.") + "This package provides a JSON RPC 2.0 server library for Python.") (license license:expat))) (define-public python-pydocstyle @@ -3224,6 +3058,32 @@ Markdown input files, and more. Pelican uses Jinja2 for templating and is very extensible.") (license license:agpl3+))) +(define-public mallard-ducktype + (package + (name "mallard-ducktype") + (version "1.0.1") + (source + (origin + (method git-fetch) + ;; git-reference because a proper source tarball is not available + ;; https://lists.gnu.org/archive/html/guix-devel/2019-05/msg00209.html + (uri (git-reference + (url "https://github.com/projectmallard/mallard-ducktype.git") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0crland0kmpsyjfmnflcw7gaqy5b87b6ah17cmr9d5z1kyazf54n")))) + (build-system python-build-system) + (home-page "http://projectmallard.org") + (synopsis "Convert Ducktype to Mallard documentation markup") + (description + "Ducktype is a lightweight syntax that can represent all the semantics +of the Mallard XML documentation system. Ducktype files can be converted to +Mallard using the @command{ducktype} tool. The yelp-tools package +provides additional functionality on the produced Mallard documents.") + (license license:expat))) + (define-public python-scikit-image (package (name "python-scikit-image") @@ -4835,7 +4695,7 @@ cluster without needing to write any wrapper code yourself.") (synopsis "Manage Procfile-based applications") (description "A Procfile is a file which describes how to run an application -consisting of serveral processes. honcho starts all listed processes. +consisting of several processes. honcho starts all listed processes. The output of all running processes is collected by honcho and displayed.") (license license:expat))) @@ -5559,6 +5419,39 @@ converts incoming documents to Unicode and outgoing documents to UTF-8.") (strip-python2-variant python-beautifulsoup4))) (arguments `(#:python ,python-2)))) +(define-public python-soupsieve + (package + (name "python-soupsieve") + (version "1.9.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "soupsieve" version)) + (sha256 + (base32 + "1jnzkiwmjl6yvqckc9mf689g87b6yz07sv868hap2aa5arggy3mj")))) + (build-system python-build-system) + (arguments `(#:tests? #f)) + ;;XXX: 2 tests fail currently despite claming they were to be + ;;skipped. Also, beautifulsoup4 may depend on this in the future, so we + ;;don't want to create a circular dependency. + (home-page "https://github.com/facelessuser/soupsieve") + (synopsis "CSS selector library") + (description + "Soup Sieve is a CSS selector library designed to be used with Beautiful +Soup 4. It aims to provide selecting, matching, and filtering using modern +CSS selectors. Soup Sieve currently provides selectors from the CSS level 1 +specifications up through the latest CSS level 4 drafts and beyond (though +some are not yet implemented).") + (license license:expat))) + +(define-public python2-soupsieve + (let ((base (package-with-python2 python-soupsieve))) + (package + (inherit base) + (propagated-inputs + `(("python2-backports-functools-lru-cache" ,python2-backports-functools-lru-cache)))))) + (define-public python-netifaces (package (name "python-netifaces") @@ -5814,7 +5707,7 @@ more advanced mathematics.") (home-page "https://github.com/mdickinson/bigfloat") (synopsis "Arbitrary precision floating-point arithmetic for Python") (description - "This packages provides a Python interface to the MPFR library for + "This package provides a Python interface to the MPFR library for multiprecision arithmetic.") (license license:lgpl3+))) @@ -6390,14 +6283,14 @@ Python.") (define-public python-markdown (package (name "python-markdown") - (version "3.1") + (version "3.1.1") (source (origin (method url-fetch) (uri (pypi-uri "Markdown" version)) (sha256 (base32 - "0l62x154r9mgdvfap06gf0nkrmjd7xixlfshsxcdif2nlrlnyjpw")))) + "0yhylk4ffqqs7x086fav4pnfsl1021v7lghznzkififprmmqfl1f")))) (build-system python-build-system) (native-inputs `(("python-nose" ,python-nose) @@ -6771,7 +6664,7 @@ and MAC network addresses.") (native-inputs `(("python-nose" ,python-nose))) (home-page "http://www.python-excel.org/") (synopsis "Library for extracting data from Excel files") - (description "This packages provides a library to extract data from + (description "This package provides a library to extract data from spreadsheets using Microsoft Excel proprietary file formats @samp{.xls} and @samp{.xlsx} (versions 2.0 onwards). It has support for Excel dates and is Unicode-aware. It is not intended as an end-user tool.") @@ -7685,7 +7578,7 @@ automatically detect a wide range of file encodings.") (synopsis "Command-line interface description language for Python") (description "This library allows the user to define a command-line interface from a program's help message rather than specifying it -programatically with command-line parsers like @code{getopt} and +programmatically with command-line parsers like @code{getopt} and @code{argparse}.") (license license:expat))) @@ -8008,26 +7901,6 @@ files for use with Python.") (home-page "https://github.com/collective/icalendar") (license license:bsd-2))) -(define-public python-sphinxcontrib-newsfeed - (package - (name "python-sphinxcontrib-newsfeed") - (version "0.1.4") - (source (origin - (method url-fetch) - (uri (pypi-uri "sphinxcontrib-newsfeed" version)) - (sha256 - (base32 - "1d7gam3mn8v4in4p16yn3v10vps7nnaz6ilw99j4klij39dqd37p")))) - (arguments '(#:tests? #f)) ; No tests. - (build-system python-build-system) - (propagated-inputs - `(("python-sphinx" ,python-sphinx))) - (synopsis "News Feed extension for Sphinx") - (description "Sphinxcontrib-newsfeed is an extension for adding a simple -Blog, News or Announcements section to a Sphinx website.") - (home-page "https://bitbucket.org/prometheus/sphinxcontrib-newsfeed") - (license license:bsd-2))) - (define-public python-args (package (name "python-args") @@ -8827,56 +8700,6 @@ programmatically interfacing with your system's $EDITOR.") (define-public python2-editor (package-with-python2 python-editor)) -(define-public python-sphinxcontrib-programoutput - (package - (name "python-sphinxcontrib-programoutput") - (version "0.10") - (source (origin - (method url-fetch) - (uri (pypi-uri "sphinxcontrib-programoutput" version)) - (sha256 - (base32 - "153hhnlbx4688zj9wd64819ps5znc2jlyp5crkgzvn5hxgy99vpx")))) - (build-system python-build-system) - (arguments - ;; FIXME: Many tests are failing and the upstream is gone. - '(#:tests? #f)) - (propagated-inputs - `(("python-sphinx" ,python-sphinx))) - (synopsis "Sphinx extension to include program output") - (description "A Sphinx extension to literally insert the output of arbitrary -commands into documents, helping you to keep your command examples up to date.") - (home-page "https://github.com/lunaryorn/sphinxcontrib-programoutput") - (license license:bsd-2))) - -(define-public python2-sphinxcontrib-programoutput - (package-with-python2 python-sphinxcontrib-programoutput)) - -(define-public python-sphinx-repoze-autointerface - (package - (name "python-sphinx-repoze-autointerface") - (version "0.8") - (source (origin - (method url-fetch) - (uri (pypi-uri "repoze.sphinx.autointerface" version)) - (sha256 - (base32 - "08ycivzf7bh4a1zcyp31hbyqs1b2c9r26raa3vxjwwmbfqr3iw4f")))) - (build-system python-build-system) - (arguments '(#:tests? #f)) ; No tests. - (propagated-inputs - `(("python-sphinx" ,python-sphinx) - ("python-zope-interface" ,python-zope-interface))) - (synopsis "Auto-generate Sphinx API docs from Zope interfaces") - (description "This package defines an extension for the Sphinx documentation -system. The extension allows generation of API documentation by -introspection of @code{zope.interface} instances in code.") - (home-page "https://github.com/repoze/repoze.sphinx.autointerface") - (license license:repoze))) - -(define-public python2-sphinx-repoze-autointerface - (package-with-python2 python-sphinx-repoze-autointerface)) - (define-public python-vobject (package (name "python-vobject") @@ -9299,14 +9122,14 @@ development version of CPython that are not available in older releases.") (define-public python-future (package (name "python-future") - (version "0.16.0") + (version "0.17.1") (source (origin (method url-fetch) (uri (pypi-uri "future" version)) (sha256 (base32 - "1nzy1k4m9966sikp0qka7lirh8sqrsyainyf8rk97db7nwdfv773")))) + "1f2rlqn9rh7adgir52dlbqz69gsab44x0mlm8gf1cs7xvhv54137")))) (build-system python-build-system) ;; Many tests connect to the network or are otherwise flawed. ;; https://github.com/PythonCharmers/python-future/issues/210 @@ -10167,7 +9990,7 @@ addresses, and phone numbers.") (description "pyaml is a PyYAML based python module to produce pretty and readable YAML-serialized data.") - (license (license:non-copyleft "http://www.wtfpl.net/txt/copying/")))) + (license license:wtfpl2))) (define-public python2-pyaml (package-with-python2 python-pyaml)) @@ -10257,17 +10080,17 @@ characters, mouse support, and auto suggestions.") (define-public python-jedi (package (name "python-jedi") - (version "0.13.2") + (version "0.13.3") (source (origin (method url-fetch) (uri (pypi-uri "jedi" version)) (sha256 (base32 - "1za944msp0f8x36qa8l309jhv0kzlsdh7r9nj3z12y8npnsh45sp")))) + "0nsrjlb57njqppxmi8wjsb1dkad7qa7svx67jbkhixq66lz61c1b")))) (build-system python-build-system) (arguments - `( ;; Many tests are failing with Python 3.7.x as of version 0.13.2 (see: + `( ;; Many tests are failing with Python 3.7.x as of version 0.13.3 (see: ;; https://github.com/davidhalter/jedi/issues/1263) #:tests? #f #:phases @@ -10293,7 +10116,11 @@ well.") (license license:expat))) (define-public python2-jedi - (package-with-python2 python-jedi)) + (let ((base (package-with-python2 (strip-python2-variant python-jedi)))) + (package + (inherit base) + (arguments (substitute-keyword-arguments (package-arguments base) + ((#:tests? _) #t)))))) (define-public ptpython (package @@ -10862,52 +10689,6 @@ English stemmer.") (define-public python2-snowballstemmer (package-with-python2 python-snowballstemmer)) -(define-public python-sphinx-cloud-sptheme - (package - (name "python-sphinx-cloud-sptheme") - (version "1.8.0") - (source (origin - (method url-fetch) - (uri (pypi-uri "cloud_sptheme" version)) - (sha256 - (base32 - "1dniqb6a39yh786f86c4jn666rwnyi1jvzn4616zhcchb7sfdshd")))) - (build-system python-build-system) - ;; FIXME: The 'pypi' release archive does not contain tests. - (arguments '(#:tests? #f)) - (native-inputs - `(("python-sphinx" ,python-sphinx))) - (home-page "https://bitbucket.org/ecollins/cloud_sptheme") - (synopsis "'Cloud' theme for Sphinx documenter") - (description "This package contains the \"Cloud\" theme for Sphinx and some -related extensions.") - (license license:bsd-3))) - -(define-public python2-sphinx-cloud-sptheme - (package-with-python2 python-sphinx-cloud-sptheme)) - -(define-public python-sphinx-alabaster-theme - (package - (name "python-sphinx-alabaster-theme") - (version "0.7.12") - (source (origin - (method url-fetch) - (uri (pypi-uri "alabaster" version)) - (sha256 - (base32 - "00nwwjj2d2ym4s2kk217x7jkx1hnczc3fvm8yxbqmsp6b0nxfqd6")))) - (build-system python-build-system) - (propagated-inputs - `(("python-pygments" ,python-pygments))) - (home-page "https://alabaster.readthedocs.io/") - (synopsis "Configurable sidebar-enabled Sphinx theme") - (description "Alabaster is a visually (c)lean, responsive, configurable -theme for the Sphinx documentation system. It's the default theme of Sphinx.") - (license license:bsd-3))) - -(define-public python2-sphinx-alabaster-theme - (package-with-python2 python-sphinx-alabaster-theme)) - (define-public python-setproctitle (package (name "python-setproctitle") @@ -12212,30 +11993,6 @@ make common patterns shorter and easier.") (define-public python2-utils (package-with-python2 python-utils)) -(define-public python-sphinx-me - (package - (name "python-sphinx-me") - (version "0.3") - (source - (origin - (method url-fetch) - (uri (pypi-uri "sphinx-me" version)) - (sha256 - (base32 - "06jzgp213zihnvpcy2y5jy3ykid3apc2ncp2pg6a2g05lhiziglq")))) - (build-system python-build-system) - (home-page "https://github.com/stephenmcd/sphinx-me") - (synopsis "Create a Sphinx documentation shell") - (description - "Create a Sphinx documentation shell for your project and include the -README file as the documentation index. It handles extracting the required -meta data such as the project name, author and version from your project for -use in your Sphinx docs.") - (license license:bsd-2))) - -(define-public python2-sphinx-me - (package-with-python2 python-sphinx-me)) - (define-public python-diff-match-patch (package (name "python-diff-match-patch") @@ -13061,13 +12818,15 @@ window memory map manager.") (define-public python-regex (package (name "python-regex") - (version "2017.06.07") + (version "2019.04.14") (source (origin (method url-fetch) (uri (pypi-uri "regex" version)) (sha256 (base32 - "06r6b7yigikbj3a72whl85r2b64pj1r0ypmw9yalmkm0wnxq8mz4")))) + "1a6hhfs6l6snr1z654ay6wzbmwdkmv282fzfkd5hk2d1n73y8v6m")))) + ;; TODO: Fix and enable regex_test.py tests that complain about the + ;; test.support module not existing. (build-system python-build-system) (home-page "https://bitbucket.org/mrabarnett/mrab-regex") (synopsis "Alternative regular expression module") @@ -15612,21 +15371,23 @@ file-based data structures that are @code{mmap}ped into memory so that many processes may share the same data.") (license license:asl2.0))) -(define-public python-sphinxcontrib-svg2pdfconverter +(define-public python-pylzma (package - (name "python-sphinxcontrib-svg2pdfconverter") - (version "0.1.0") - (source (origin - (method url-fetch) - (uri (pypi-uri "sphinxcontrib-svg2pdfconverter" version)) - (sha256 - (base32 - "1abvbgkkii13q8nsb10r0gc5lm0p9iq1iwhfhakn5ifn6asa0183")))) + (name "python-pylzma") + (version "0.5.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pylzma" version)) + (sha256 + (base32 + "074anvhyjgsv2iby2ql1ixfvjgmhnvcwjbdz8gk70xzkzcm1fx5q")))) (build-system python-build-system) - (propagated-inputs - `(("python-sphinx" ,python-sphinx))) - (home-page "https://github.com/missinglinkelectronics/sphinxcontrib-svg2pdfconverter/releases") - (synopsis "Sphinx SVG to PDF converter extension") - (description "A Sphinx extension to convert SVG images to PDF in case the builder does not support -SVG images natively (e.g. LaTeX).") - (license license:bsd-3))) + (home-page "http://www.joachim-bauch.de/projects/pylzma/") + (synopsis "Python bindings for the LZMA library by Igor Pavlov.") + (description "This package provides Python bindings for the LZMA library +by Igor Pavlov.") + (license license:lgpl2.1+))) + +(define-public python2-pylzma + (package-with-python2 python-pylzma)) |