diff options
Diffstat (limited to 'gnu/packages/maths.scm')
| -rw-r--r-- | gnu/packages/maths.scm | 65 |
1 files changed, 46 insertions, 19 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index a4505c7b6f..16896502ea 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -311,6 +311,9 @@ numbers.") the OCaml language.") (license license:gpl3+))) +(define-public ocaml4.01-gsl + (package-with-ocaml4.01 ocaml-gsl)) + (define-public glpk (package (name "glpk") @@ -489,7 +492,7 @@ singular value problems.") (define-public gnuplot (package (name "gnuplot") - (version "5.0.5") + (version "5.0.6") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/gnuplot/gnuplot/" @@ -497,7 +500,7 @@ singular value problems.") version ".tar.gz")) (sha256 (base32 - "0lr065qdlgss8lmy31l7hkmnk9fp4lvqq9qgb1f1209f36zy1wr5")))) + "0q5lr6nala3ln6f3yp6g17ziymb9r9gx9zylnw1y3hjmwl9lggjv")))) (build-system gnu-build-system) (inputs `(("readline" ,readline) ("cairo" ,cairo) @@ -850,6 +853,30 @@ sharing of scientific data.") "--disable-shared" "--with-pic" ,flags)))))) +(define-public netcdf-fortran + (package + (name "netcdf-fortran") + (version "4.4.4") + (source (origin + (method url-fetch) + (uri (string-append + "ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-fortran-" + version ".tar.gz")) + (sha256 + (base32 + "0xaxdcg1p83zmypwml3swsnr3ccn38inwldyr1l3wa4dbwbrblxj")))) + (build-system gnu-build-system) + (arguments + `(#:parallel-tests? #f)) + (inputs + `(("netcdf" ,netcdf))) + (native-inputs + `(("gfortran" ,gfortran))) + (synopsis "Fortran interface for the netCDF library") + (description (package-description netcdf)) + (home-page (package-home-page netcdf)) + (license (package-license netcdf)))) + (define-public nlopt (package (name "nlopt") @@ -1001,6 +1028,7 @@ can solve two kinds of problems: (inputs `(("lapack" ,lapack) ("readline" ,readline) + ("gl2ps" ,gl2ps) ("glpk" ,glpk) ("fftw" ,fftw) ("fftwf" ,fftwf) @@ -1583,12 +1611,12 @@ programming problems.") (define-public r-pracma (package (name "r-pracma") - (version "1.9.5") + (version "2.0.4") (source (origin (method url-fetch) (uri (cran-uri "pracma" version)) (sha256 - (base32 "19nr2jlkbcdgvw3gx5hry12av565lmvqd5q4h7zlch3q13avwwl2")))) + (base32 "1z3i90mkzwvp9di17caf4934z2xlb2imm3hwxllcrbwvmnmhrwyc")))) (build-system r-build-system) (propagated-inputs `(("r-quadprog" ,r-quadprog))) @@ -2159,14 +2187,14 @@ full text searching.") (define-public armadillo (package (name "armadillo") - (version "7.600.2") + (version "7.800.2") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/arma/armadillo-" version ".tar.xz")) (sha256 (base32 - "0bac9y46m61zxinj51l82w06v01ra9vw7a9j6rrwdjhznkkdb437")))) + "1qqzy7dp891j9v7062mv1599hdwr97vqzrd3j2fl8c3gmc00dmzg")))) (build-system cmake-build-system) (arguments `(#:tests? #f)) ;no test target (inputs @@ -2183,18 +2211,7 @@ environments. It can be used for machine learning, pattern recognition, signal processing, bioinformatics, statistics, econometrics, etc. The library provides efficient classes for vectors, matrices and cubes, as well as 150+ associated functions (eg. contiguous and non-contiguous submatrix views).") - (license license:mpl2.0))) - -(define-public armadillo-for-rcpparmadillo - (package (inherit armadillo) - (version "7.600.1") - (source (origin - (method url-fetch) - (uri (string-append "mirror://sourceforge/arma/armadillo-" - version ".tar.xz")) - (sha256 - (base32 - "1dxgfd2r9lbh24nszvqm2lag439s0srxaf1l86f6ww6waqm5r8zk")))))) + (license license:asl2.0))) (define-public muparser ;; When switching download sites, muparser re-issued a 2.2.5 release with a @@ -2730,6 +2747,8 @@ in finite element programs.") (base32 "022w8hph7bli5zbpnk3z1qh1c2sl5hm8fw2ccim651ynn0hr7fyz")))) (build-system cmake-build-system) + (outputs '("out" + "octave")) ;46 MiB .mex file that pulls Octave (native-inputs `(("unzip" ,unzip))) (inputs @@ -2747,6 +2766,14 @@ in finite element programs.") ;; Save 12 MiB by not installing .a files. Passing ;; '-DBUILD_STATIC_LIBS=OFF' has no effect. #:phases (modify-phases %standard-phases + (add-before 'configure 'set-octave-directory + (lambda* (#:key outputs #:allow-other-keys) + ;; Install the .mex file in the "octave" output. + (let ((out (assoc-ref outputs "octave"))) + (substitute* "src/matlab/CMakeLists.txt" + (("share/flann/octave") + (string-append out "/share/flann/octave"))) + #t))) (add-after 'install 'remove-static-libraries (lambda* (#:key outputs #:allow-other-keys) (let* ((out (assoc-ref outputs "out")) @@ -3003,7 +3030,7 @@ compilers and compiler versions as well as portability between different vector instruction sets. Thus, an application written with Vc can be compiled for: @enumerate @item AVX and AVX2 -@item SSE2 upto SSE4.2 or SSE4a +@item SSE2 up to SSE4.2 or SSE4a @item Scalar @item MIC @item NEON (in development) |