diff options
Diffstat (limited to 'gnu/packages/irods.scm')
| -rw-r--r-- | gnu/packages/irods.scm | 104 |
1 files changed, 104 insertions, 0 deletions
diff --git a/gnu/packages/irods.scm b/gnu/packages/irods.scm index ffd8ac4b5f..bb0263682c 100644 --- a/gnu/packages/irods.scm +++ b/gnu/packages/irods.scm @@ -20,10 +20,12 @@ #:use-module ((guix licenses) #:prefix license:) #:use-module (guix packages) #:use-module (guix download) + #:use-module (guix git-download) #:use-module (guix build-system cmake) #:use-module (guix utils) #:use-module (gnu packages) #:use-module (gnu packages backup) + #:use-module (gnu packages base) #:use-module (gnu packages boost) #:use-module (gnu packages check) #:use-module (gnu packages compression) @@ -34,6 +36,7 @@ #:use-module (gnu packages linux) #:use-module (gnu packages llvm) #:use-module (gnu packages logging) + #:use-module (gnu packages man) #:use-module (gnu packages networking) #:use-module (gnu packages pretty-print) #:use-module (gnu packages python) @@ -165,3 +168,104 @@ management software. iRODS virtualizes data storage resources, so users can take control of their data, regardless of where and on what device the data is stored.") (license license:bsd-3))) + +(define-public irods-client-icommands + (package + (name "irods-client-icommands") + (version "4.2.8") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/irods/irods_client_icommands") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "069n647p5ypf44gim8z26mwayg5lzgk7r9qyyqd8f9n7h0p4jxpn")))) + (build-system cmake-build-system) + (arguments + `(#:tests? #false ; not clear how to run tests + #:configure-flags + (list + "-DCMAKE_BUILD_TYPE=Release" + + ;; Configuration attempts to guess the distribution with Python. + "-DIRODS_LINUX_DISTRIBUTION_NAME=guix" + "-DIRODS_LINUX_DISTRIBUTION_VERSION_MAJOR=1" + + (string-append "-DIRODS_DIR=" + (assoc-ref %build-inputs "irods") + "/lib/irods/cmake") + (string-append "-DIRODS_EXTERNALS_FULLPATH_CLANG=" + (assoc-ref %build-inputs "clang")) + (string-append "-DIRODS_EXTERNALS_FULLPATH_CLANG_RUNTIME=" + (assoc-ref %build-inputs "clang-runtime")) + (string-append "-DIRODS_EXTERNALS_FULLPATH_CPPZMQ=" + (assoc-ref %build-inputs "cppzmq")) + (string-append "-DIRODS_EXTERNALS_FULLPATH_ARCHIVE=" + (assoc-ref %build-inputs "libarchive")) + (string-append "-DIRODS_EXTERNALS_FULLPATH_AVRO=" + (assoc-ref %build-inputs "avro-cpp")) + (string-append "-DIRODS_EXTERNALS_FULLPATH_BOOST=" + (assoc-ref %build-inputs "boost")) + (string-append "-DIRODS_EXTERNALS_FULLPATH_ZMQ=" + (assoc-ref %build-inputs "zeromq")) + (string-append "-DIRODS_EXTERNALS_FULLPATH_JSON=" + (assoc-ref %build-inputs "json")) + (string-append "-DIRODS_EXTERNALS_FULLPATH_FMT=" + (assoc-ref %build-inputs "fmt"))) + + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'unset-Werror ; + (lambda _ ; + ;; -Werror kills the build due to a deprecation warning + (substitute* "CMakeLists.txt" ; + (("-Werror") "")))) + (add-after 'unpack 'remove-/usr-prefix + (lambda _ + (substitute* "CMakeLists.txt" + (("usr/") "")))) + (add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH + (lambda* (#:key inputs #:allow-other-keys) + (let ((gcc (assoc-ref inputs "gcc"))) + (setenv "CPLUS_INCLUDE_PATH" + (string-join + (cons* (string-append (assoc-ref inputs "libcxx+libcxxabi") + "/include/c++/v1") + (string-append (assoc-ref inputs "json") + "/include/nlohmann") + ;; Hide GCC's C++ headers so that they do not interfere with + ;; the Clang headers. + (delete (string-append gcc "/include/c++") + (string-split (getenv "CPLUS_INCLUDE_PATH") + #\:))) + ":")) + (format #true + "environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%" + (getenv "CPLUS_INCLUDE_PATH")))))))) + (inputs + `(("avro-cpp" ,avro-cpp-1.9-for-irods) + ("boost" ,boost-for-irods) + ("cppzmq" ,cppzmq) + ("fmt" ,fmt-for-irods) + ("irods" ,irods) + ("json" ,json-modern-cxx) + ("libarchive" ,libarchive) + ("libcxxabi" ,libcxxabi-6) ; we need this for linking with -lc++abi + ("mit-krb5" ,mit-krb5) + ("openssl" ,openssl) + ("zeromq" ,zeromq))) + (native-inputs + `(("clang" ,clang-toolchain-6) + ("clang-runtime" ,clang-runtime-6) + ("libcxx+libcxxabi" ,libcxx+libcxxabi-6) + ("help2man" ,help2man) + ("which" ,which))) + (home-page "https://irods.org") + (synopsis "Data management software") + (description "The Integrated Rule-Oriented Data System (iRODS) is data +management software. iRODS virtualizes data storage resources, so users can +take control of their data, regardless of where and on what device the data is +stored.") + (license license:bsd-3))) |