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-rw-r--r--gnu/packages/bioinformatics.scm14
1 files changed, 8 insertions, 6 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cd01027bce..cb4cfd58af 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7502,13 +7502,13 @@ checks on R packages that are to be submitted to the Bioconductor repository.")
(define-public r-s4vectors
(package
(name "r-s4vectors")
- (version "0.24.3")
+ (version "0.24.4")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "S4Vectors" version))
(sha256
(base32
- "01f7dms4kw9ajwqlvh5s47riv748xrrs41na03byhjvn4fbdc44y"))))
+ "1fzs8j2d3wwfzm2fq63ywf68a4dbggyl5l098f148yn4jw7jd3bc"))))
(properties
`((upstream-name . "S4Vectors")))
(build-system r-build-system)
@@ -7944,13 +7944,13 @@ tab-delimited (tabix) files.")
(define-public r-delayedarray
(package
(name "r-delayedarray")
- (version "0.12.2")
+ (version "0.12.3")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "DelayedArray" version))
(sha256
(base32
- "09lackgix5jpm16k0mz2zkibflfb4wzidbz4q32mlxmklf40037q"))))
+ "02i88ll2d7r83nk0wdj28akvsz3jq19g6ixpaahfy3jy5av4byv6"))))
(properties
`((upstream-name . "DelayedArray")))
(build-system r-build-system)
@@ -7961,6 +7961,8 @@ tab-delimited (tabix) files.")
("r-iranges" ,r-iranges)
("r-matrix" ,r-matrix)
("r-matrixstats" ,r-matrixstats)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/DelayedArray")
(synopsis "Delayed operations on array-like objects")
(description
@@ -12769,7 +12771,7 @@ expression report comparing samples in an easily configurable manner.")
(define-public pigx-chipseq
(package
(name "pigx-chipseq")
- (version "0.0.41")
+ (version "0.0.42")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_chipseq/"
@@ -12777,7 +12779,7 @@ expression report comparing samples in an easily configurable manner.")
"/pigx_chipseq-" version ".tar.gz"))
(sha256
(base32
- "0akbxdmsjsq5fzbwaap04hqjpsfgv1l6yrc2pwgbya1xgqvcq6vy"))))
+ "0xbvgqpk32a8iczhvac56cacr46rdkqb0allhhpvmj940idf72bi"))))
(build-system gnu-build-system)
;; parts of the tests rely on access to the network
(arguments '(#:tests? #f))