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-rw-r--r--gnu/packages/bioconductor.scm10
1 files changed, 10 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a49c05dbce..68d8e5b574 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2313,6 +2313,8 @@ possible, parallelization is achieved using the BiocParallel framework.")
("r-tidyr" ,r-tidyr)
("r-tidyselect" ,r-tidyselect)
("r-vim" ,r-vim)))
+ (native-inputs
+ `(("r-nbconvertr" ,r-nbconvertr))) ; for vignettes
(home-page "https://bioconductor.org/packages/destiny/")
(synopsis "Create and plot diffusion maps")
(description "This package provides tools to create and plot diffusion
@@ -3529,6 +3531,8 @@ to multiple hypothesis correction.")
("r-qvalue" ,r-qvalue)
("r-reshape2" ,r-reshape2)
("r-s4vectors" ,r-s4vectors)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://guangchuangyu.github.io/software/DOSE/")
(synopsis "Disease ontology semantic and enrichment analysis")
(description
@@ -3899,6 +3903,8 @@ further downstream analysis on its output.")
`(("r-biocparallel" ,r-biocparallel)
("r-ellipse" ,r-ellipse)
("r-ggplot2" ,r-ggplot2)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/bacon/")
(synopsis "Controlling bias and inflation in association studies")
(description
@@ -6733,6 +6739,8 @@ using whole genome sequencing data.")
`(("r-data-table" ,r-data-table)
("r-ggplot2" ,r-ggplot2)
("r-metap" ,r-metap)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://cran.r-project.org/web/packages/ActivePathways/")
(synopsis "Multivariate pathway enrichment analysis")
(description
@@ -7105,6 +7113,8 @@ structures.")
("r-rjson" ,r-rjson)
("r-rsqlite" ,r-rsqlite)
("r-xml" ,r-xml)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/TylerBackman/bioassayR")
(synopsis "Cross-target analysis of small molecule bioactivity")
(description