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-rw-r--r--gnu/packages/algebra.scm103
1 files changed, 102 insertions, 1 deletions
diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm
index 8c42ac31cc..57f273cc7a 100644
--- a/gnu/packages/algebra.scm
+++ b/gnu/packages/algebra.scm
@@ -3,7 +3,7 @@
;;; Copyright © 2013, 2015, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016, 2017, 2018 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
-;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
@@ -35,6 +35,7 @@
#:use-module (gnu packages gl)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages image)
+ #:use-module (gnu packages java)
#:use-module (gnu packages maths)
#:use-module (gnu packages mpi)
#:use-module (gnu packages multiprecision)
@@ -46,9 +47,11 @@
#:use-module (gnu packages texinfo)
#:use-module (gnu packages xiph)
#:use-module (gnu packages xorg)
+ #:use-module (guix build-system ant)
#:use-module (guix build-system gnu)
#:use-module (guix build-system cmake)
#:use-module (guix download)
+ #:use-module (guix git-download)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix utils))
@@ -599,6 +602,104 @@ cosine/ sine transforms or DCT/DST).")
(synopsis "Computing the discrete Fourier transform (AVX2-optimized)")
(supported-systems '("x86_64-linux"))))
+(define-public java-la4j
+ (package
+ (name "java-la4j")
+ (version "0.6.0")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/vkostyukov/la4j.git")
+ (commit version)))
+ (file-name (string-append name "-" version "-checkout"))
+ (sha256
+ (base32
+ "1qir8dr978cfvz9k12m2kbdwpyf6cqdf1d0ilb7lnkhbgq5i53w3"))))
+ (build-system ant-build-system)
+ (arguments
+ `(#:jar-name "la4j.jar"
+ #:jdk ,icedtea-8
+ #:test-exclude (list "**/Abstract*.java"
+ "**/MatrixTest.java"
+ "**/DenseMatrixTest.java"
+ "**/SparseMatrixTest.java"
+ "**/VectorTest.java"
+ "**/SparseVectorTest.java"
+ "**/DenseVectorTest.java")))
+ (native-inputs
+ `(("java-junit" ,java-junit)
+ ("java-hamcrest-core" ,java-hamcrest-core)))
+ (home-page "http://la4j.org/")
+ (synopsis "Java library that provides Linear Algebra primitives and algorithms")
+ (description "The la4j library is a Java library that provides Linear
+Algebra primitives (matrices and vectors) and algorithms. The key features of
+the la4j library are:
+
+@itemize
+@item No dependencies and tiny size
+@item Fluent object-oriented/functional API
+@item Sparse (CRS, CCS) and dense (1D/2D arrays) matrices
+@item Linear systems solving (Gaussian, Jacobi, Zeidel, Square Root, Sweep and other)
+@item Matrices decomposition (Eigenvalues/Eigenvectors, SVD, QR, LU, Cholesky and other)
+@item MatrixMarket/CSV IO formats support for matrices and vectors
+@end itemize\n")
+ (license license:asl2.0)))
+
+(define-public java-jlargearrays
+ (package
+ (name "java-jlargearrays")
+ (version "1.6")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://search.maven.org/remotecontent?"
+ "filepath=pl/edu/icm/JLargeArrays/"
+ version "/JLargeArrays-" version
+ "-sources.jar"))
+ (file-name (string-append name "-" version ".jar"))
+ (sha256
+ (base32
+ "0v05iphpxbjnd7f4jf1rlqq3m8hslhcm0imdbsgxr20pi3xkaf2a"))))
+ (build-system ant-build-system)
+ (arguments
+ `(#:jar-name "jlargearrays.jar"
+ #:tests? #f ; tests are not included in the release archive
+ #:jdk ,icedtea-8))
+ (propagated-inputs
+ `(("java-commons-math3" ,java-commons-math3)))
+ (home-page "https://gitlab.com/ICM-VisLab/JLargeArrays")
+ (synopsis "Library of one-dimensional arrays that can store up to 263 elements")
+ (description "JLargeArrays is a Java library of one-dimensional arrays
+that can store up to 263 elements.")
+ (license license:bsd-2)))
+
+(define-public java-jtransforms
+ (package
+ (name "java-jtransforms")
+ (version "3.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "http://search.maven.org/remotecontent?"
+ "filepath=com/github/wendykierp/JTransforms/"
+ version "/JTransforms-" version "-sources.jar"))
+ (sha256
+ (base32
+ "1haw5m8shv5srgcpwkl853dz8bv6h90bzlhcps6mdpb4cixjirsg"))))
+ (build-system ant-build-system)
+ (arguments
+ `(#:jar-name "jtransforms.jar"
+ #:tests? #f ; tests are not included in the release archive
+ #:jdk ,icedtea-8))
+ (propagated-inputs
+ `(("java-commons-math3" ,java-commons-math3)
+ ("java-jlargearrays" ,java-jlargearrays)))
+ (home-page "https://github.com/wendykierp/JTransforms")
+ (synopsis "Multithreaded FFT library written in pure Java")
+ (description "JTransforms is a multithreaded FFT library written in pure
+Java. Currently, four types of transforms are available: @dfn{Discrete
+Fourier Transform} (DFT), @dfn{Discrete Cosine Transform} (DCT), @dfn{Discrete
+Sine Transform} (DST) and @dfn{Discrete Hartley Transform} (DHT).")
+ (license license:bsd-2)))
+
(define-public eigen
(package
(name "eigen")