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-rw-r--r--gnu/packages/algebra.scm85
1 files changed, 46 insertions, 39 deletions
diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm
index 0f19649917..52eb6ee366 100644
--- a/gnu/packages/algebra.scm
+++ b/gnu/packages/algebra.scm
@@ -1,13 +1,13 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017, 2018 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2013, 2015, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
-;;; Copyright © 2016, 2017, 2018 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2016, 2017, 2018, 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2014, 2018 Mark H Weaver <mhw@netris.org>
-;;; Copyright © 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2016, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
-;;; Copyright © 2017 Eric Bavier <bavier@member.fsf.org>
+;;; Copyright © 2017, 2019 Eric Bavier <bavier@member.fsf.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -138,43 +138,46 @@ solve the shortest vector problem.")
(define-public pari-gp
(package
- (name "pari-gp")
- (version "2.11.1")
- (source (origin
- (method url-fetch)
- (uri (string-append
- "https://pari.math.u-bordeaux.fr/pub/pari/unix/pari-"
- version ".tar.gz"))
- (sha256
- (base32
+ (name "pari-gp")
+ (version "2.11.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append
+ "https://pari.math.u-bordeaux.fr/pub/pari/unix/pari-"
+ version ".tar.gz"))
+ (sha256
+ (base32
"1jfax92jpydjd02fwl30r6b8kfzqqd6sm4yx94gidyz9lqjb7a94"))))
- (build-system gnu-build-system)
- (native-inputs `(("texlive" ,texlive-tiny)))
- (inputs `(("gmp" ,gmp)
- ("libx11" ,libx11)
- ("perl" ,perl)
- ("readline" ,readline)))
- (arguments
- '(#:make-flags '("all")
- #:test-target "dobench"
- #:phases (modify-phases %standard-phases
- (replace 'configure
- (lambda* (#:key outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- (zero?
- (system* "./Configure"
- (string-append "--prefix=" out)))))))))
- (synopsis "PARI/GP, a computer algebra system for number theory")
- (description
- "PARI/GP is a widely used computer algebra system designed for fast
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("texlive" ,(texlive-union
+ (list texlive-fonts-amsfonts
+ texlive-latex-amsfonts)))))
+ (inputs `(("gmp" ,gmp)
+ ("libx11" ,libx11)
+ ("perl" ,perl)
+ ("readline" ,readline)))
+ (arguments
+ '(#:make-flags '("all")
+ #:test-target "dobench"
+ #:phases
+ (modify-phases %standard-phases
+ (replace 'configure
+ (lambda* (#:key outputs #:allow-other-keys)
+ (invoke "./Configure"
+ (string-append "--prefix="
+ (assoc-ref outputs "out"))))))))
+ (synopsis "PARI/GP, a computer algebra system for number theory")
+ (description
+ "PARI/GP is a widely used computer algebra system designed for fast
computations in number theory (factorisations, algebraic number theory,
elliptic curves...), but it also contains a large number of other useful
functions to compute with mathematical entities such as matrices,
polynomials, power series, algebraic numbers, etc., and a lot of
transcendental functions.
PARI is also available as a C library to allow for faster computations.")
- (license license:gpl2+)
- (home-page "https://pari.math.u-bordeaux.fr/")))
+ (license license:gpl2+)
+ (home-page "https://pari.math.u-bordeaux.fr/")))
(define-public gp2c
(package
@@ -243,7 +246,7 @@ precision.")
(define-public giac-xcas
(package
(name "giac-xcas")
- (version "1.5.0-19")
+ (version "1.5.0-37")
(source (origin
(method url-fetch)
;; "~parisse/giac" is not used because the maintainer regularly
@@ -255,7 +258,7 @@ precision.")
"source/giac_" version ".tar.gz"))
(sha256
(base32
- "0ds1zh712sr20qh0fih8jnm4nlv90andllp8n263qs7rlhblz551"))))
+ "1c6jmswv3ay13n6mjgh9w7nbpdgm5lbwdcmva5sli3vqn4chn3vq"))))
(build-system gnu-build-system)
(outputs '("out" "doc")) ;77MiB of documentation
(arguments
@@ -354,11 +357,11 @@ or text interfaces) or as a C++ library.")
(mpfr (assoc-ref inputs "mpfr")))
;; do not pass "--enable-fast-install", which makes the
;; homebrew configure process fail
- (zero? (system*
- "./configure"
+ (invoke "./configure"
(string-append "--prefix=" out)
(string-append "--with-gmp=" gmp)
- (string-append "--with-mpfr=" mpfr)))))))))
+ (string-append "--with-mpfr=" mpfr))
+ #t))))))
(synopsis "Fast library for number theory")
(description
"FLINT is a C library for number theory. It supports arithmetic
@@ -660,7 +663,11 @@ cosine/ sine transforms or DCT/DST).")
(arguments
(substitute-keyword-arguments (package-arguments fftw)
((#:configure-flags cf)
- `(cons "--enable-mpi" ,cf))))
+ `(cons "--enable-mpi" ,cf))
+ ((#:phases phases '%standard-phases)
+ `(modify-phases ,phases
+ (add-before 'check 'mpi-setup
+ ,%openmpi-setup)))))
(description
(string-append (package-description fftw)
" With OpenMPI parallelism support."))))