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-rw-r--r--gnu/packages/algebra.scm91
1 files changed, 36 insertions, 55 deletions
diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm
index 210b734b9c..61981f6c7b 100644
--- a/gnu/packages/algebra.scm
+++ b/gnu/packages/algebra.scm
@@ -2,7 +2,7 @@
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2013, 2015, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016, 2017, 2018 Nicolas Goaziou <mail@nicolasgoaziou.fr>
-;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
+;;; Copyright © 2014, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
@@ -519,31 +519,40 @@ a C program.")
(license license:bsd-3)))
(define-public fftw
- ;; TODO: Make this 3.3.7 (see below) on the next upgrade cycle.
(package
(name "fftw")
- (version "3.3.5")
+ (version "3.3.7")
(source (origin
(method url-fetch)
(uri (string-append "ftp://ftp.fftw.org/pub/fftw/fftw-"
version".tar.gz"))
(sha256
(base32
- "1kwbx92ps0r7s2mqy7lxbxanslxdzj7dp7r7gmdkzv1j8yqf3kwf"))))
+ "0wsms8narnbhfsa8chdflv2j9hzspvflblnqdn7hw8x5xdzrnq1v"))))
(build-system gnu-build-system)
(arguments
- '(#:configure-flags
- '("--enable-shared" "--enable-openmp" "--enable-threads")
- #:phases (alist-cons-before
- 'build 'no-native
- (lambda _
- ;; By default '-mtune=native' is used. However, that may
- ;; cause the use of ISA extensions (SSE2, etc.) that are
- ;; not necessarily available on the user's machine when
- ;; that package is built on a different machine.
- (substitute* (find-files "." "Makefile$")
- (("-mtune=native") "")))
- %standard-phases)))
+ `(#:configure-flags
+ '("--enable-shared" "--enable-openmp" "--enable-threads"
+ ,@(let ((system (or (%current-target-system) (%current-system))))
+ ;; Enable SIMD extensions for codelets. See details at:
+ ;; <http://fftw.org/fftw3_doc/Installation-on-Unix.html>.
+ (cond
+ ((string-prefix? "x86_64" system)
+ '("--enable-sse2" "--enable-avx" "--enable-avx2"
+ "--enable-avx512" "--enable-avx-128-fma"))
+ ((string-prefix? "i686" system)
+ '("--enable-sse2"))
+ ((string-prefix? "aarch64" system)
+ ;; Note that fftw supports NEON on 32-bit ARM only when
+ ;; compiled for single-precision.
+ '("--enable-neon"))
+ (else
+ '())))
+ ;; By default '-mtune=native' is used. However, that may cause the
+ ;; use of ISA extensions (e.g. AVX) that are not necessarily
+ ;; available on the user's machine when that package is built on a
+ ;; different machine.
+ "ax_cv_c_flags__mtune_native=no")))
(native-inputs `(("perl" ,perl)))
(home-page "http://fftw.org")
(synopsis "Computing the discrete Fourier transform")
@@ -559,8 +568,15 @@ cosine/ sine transforms or DCT/DST).")
(name "fftwf")
(arguments
(substitute-keyword-arguments (package-arguments fftw)
- ((#:configure-flags cf)
- `(cons "--enable-float" ,cf))))
+ ((#:configure-flags fftw-configure-flags)
+ `(cons* "--enable-single"
+ ,@(if (string-prefix? "arm" (or (%current-target-system)
+ (%current-system)))
+ ;; fftw supports NEON on 32-bit ARM only when compiled
+ ;; for single-precision, so add it here.
+ '("--enable-neon")
+ '())
+ ,fftw-configure-flags))))
(description
(string-append (package-description fftw)
" Single-precision version."))))
@@ -579,42 +595,6 @@ cosine/ sine transforms or DCT/DST).")
(string-append (package-description fftw)
" With OpenMPI parallelism support."))))
-(define-public fftw-3.3.7
- ;; TODO: Make this the default 'fftw' on the next upgrade cycle.
- (package
- (inherit fftw)
- (version "3.3.7")
- (source (origin
- (method url-fetch)
- (uri (string-append "ftp://ftp.fftw.org/pub/fftw/fftw-"
- version".tar.gz"))
- (sha256
- (base32
- "0wsms8narnbhfsa8chdflv2j9hzspvflblnqdn7hw8x5xdzrnq1v"))))))
-
-(define-public fftw-avx
- (package
- (inherit fftw-3.3.7)
- (name "fftw-avx")
- (arguments
- (substitute-keyword-arguments (package-arguments fftw-3.3.7)
- ((#:configure-flags flags ''())
- ;; Enable AVX & co. See details at:
- ;; <http://fftw.org/fftw3_doc/Installation-on-Unix.html>.
- `(append '("--enable-avx" "--enable-avx2" "--enable-avx512"
- "--enable-avx-128-fma")
- ,flags))
- ((#:substitutable? _ #f)
- ;; To run the tests, we must have a CPU that supports all these
- ;; extensions. Since we cannot be sure that machines in the build
- ;; farm support them, disable substitutes altogether.
- #f)
- ((#:phases _)
- ;; Since we're not providing binaries, let '-mtune=native' through.
- '%standard-phases)))
- (synopsis "Computing the discrete Fourier transform (AVX2-optimized)")
- (supported-systems '("x86_64-linux"))))
-
(define-public java-la4j
(package
(name "java-la4j")
@@ -743,7 +723,8 @@ Sine Transform} (DST) and @dfn{Discrete Hartley Transform} (DHT).")
;; See
;; https://bitbucket.org/eigen/eigen/commits/ea8c22ce6920e982d15245ee41d0531a46a28e5d
((".*svd_preallocate[^\n]*" &)
- (string-append "//" & " // Not supported by BDCSVD")))))))
+ (string-append "//" & " // Not supported by BDCSVD")))
+ #t))))
(build-system cmake-build-system)
(arguments
'(;; Turn off debugging symbols to save space.