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| -rw-r--r-- | gnu/packages/bioconductor.scm | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 70ad6edc2f..6590f6eb5b 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -7171,3 +7171,36 @@ has associated metadata, tags and date of modification. The client creates and manages a local cache of files retrieved enabling quick and reproducible access.") (license license:artistic2.0))) + +(define-public r-multiassayexperiment + (package + (name "r-multiassayexperiment") + (version "1.12.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "MultiAssayExperiment" version)) + (sha256 + (base32 + "0hqg0b0hd5msnb4jcn1nbfyy1n1llfkipy2ivwncivkmbdn8psp4")))) + (properties + `((upstream-name . "MultiAssayExperiment"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-genomicranges" ,r-genomicranges) + ("r-iranges" ,r-iranges) + ("r-s4vectors" ,r-s4vectors) + ("r-summarizedexperiment" ,r-summarizedexperiment) + ("r-tidyr" ,r-tidyr))) + (home-page "http://waldronlab.io/MultiAssayExperiment/") + (synopsis "Integration of multi-omics experiments in Bioconductor") + (description + "MultiAssayExperiment harmonizes data management of multiple assays +performed on an overlapping set of specimens. It provides a familiar +Bioconductor user experience by extending concepts from +@code{SummarizedExperiment}, supporting an open-ended mix of standard data +classes for individual assays, and allowing subsetting by genomic ranges or +rownames.") + (license license:artistic2.0))) |