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| -rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 8452afaa8b..41e8f07603 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6490,6 +6490,29 @@ Illumina paired-end data (for CASAVA 1.8+).") average nucleotide identity.") (license license:expat))) +(define-public python-pyahocorasick + (package + (name "python-pyahocorasick") + (version "2.1.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/WojciechMula/pyahocorasick") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1fsnivwcw56q7lwz41c5kbfvxv0v17mmkx43i2a293l49fxj08j8")))) + (build-system pyproject-build-system) + (native-inputs (list python-pytest python-twine python-wheel)) + (home-page "https://github.com/WojciechMula/pyahocorasick") + (synopsis "Library for finding multiple key strings in text") + (description + "Pyahocorasick is a fast, memory-efficient library for multi-pattern string search. +This means that you can find multiple key strings occurrences +at once in some input text.") + (license license:bsd-3))) + (define-public exonerate (package (name "exonerate") |