diff options
| -rw-r--r-- | gnu/packages/python.scm | 87 |
1 files changed, 38 insertions, 49 deletions
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index cb25419881..2e4341ce85 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -1689,17 +1689,6 @@ OAuth request-signing logic.") (let ((base (package-with-python2 python-oauthlib))) (package (inherit base) - (name "python2-oauthlib") - (version "0.6.3") - (source (origin - (method url-fetch) - (uri - (string-append - "https://pypi.python.org/packages/source/o/oauthlib/oauthlib-" - version ".tar.gz")) - (sha256 - (base32 - "1yaj3j64la4arwsbhbfmpnickzh3jpg9nlpyg409v8pp24isn48a")))) (inputs (append (package-inputs base) `(("python2-unittest2" ,python2-unittest2))))))) @@ -1994,25 +1983,25 @@ writing C extensions for Python as easy as Python itself.") 'build 'set-environment-variables (lambda* (#:key inputs #:allow-other-keys) (let* ((atlas-threaded - (string-append (assoc-ref inputs "atlas") + (string-append (assoc-ref inputs "atlas") "/lib/libtatlas.so")) ;; On single core CPUs only the serial library is created. (atlas-lib (if (file-exists? atlas-threaded) atlas-threaded - (string-append (assoc-ref inputs "atlas") + (string-append (assoc-ref inputs "atlas") "/lib/libsatlas.so")))) (setenv "ATLAS" atlas-lib))) ;; Tests can only be run after the library has been installed and not ;; within the source directory. (alist-cons-after 'install 'check - (lambda _ + (lambda _ (with-directory-excursion "/tmp" - (zero? (system* "python" "-c" + (zero? (system* "python" "-c" "import numpy; numpy.test(verbose=2)")))) - (alist-delete - 'check + (alist-delete + 'check %standard-phases))))) (home-page "http://www.numpy.org/") (synopsis "Fundamental package for scientific computing with Python") @@ -2030,7 +2019,7 @@ capabilities.") (package (inherit python-numpy-bootstrap) (name "python-numpy") (outputs '("out" "doc")) - (inputs + (inputs `(("which" ,which) ("python-setuptools" ,python-setuptools) ("python-matplotlib" ,python-matplotlib) @@ -2045,15 +2034,15 @@ capabilities.") ("perl" ,perl) ,@(package-native-inputs python-numpy-bootstrap))) (arguments - `(,@(substitute-keyword-arguments + `(,@(substitute-keyword-arguments (package-arguments python-numpy-bootstrap) ((#:phases phases) `(alist-cons-after 'install 'install-doc (lambda* (#:key outputs #:allow-other-keys) (let* ((data (string-append (assoc-ref outputs "doc") "/share")) - (doc (string-append - data "/doc/" ,name "-" + (doc (string-append + data "/doc/" ,name "-" ,(package-version python-numpy-bootstrap))) (info (string-append data "/info")) (html (string-append doc "/html")) @@ -2062,7 +2051,7 @@ capabilities.") (mkdir-p html) (system* "make" "html" pyver) (system* "make" "latex" "PAPER=a4" pyver) - (system* "make" "-C" "build/latex" + (system* "make" "-C" "build/latex" "all-pdf" "PAPER=a4" pyver) ;; FIXME: Generation of the info file fails. ;; (system* "make" "info" pyver) @@ -2091,7 +2080,7 @@ capabilities.") ;; import the right version of 'matplotlib' as well. (inputs `(("python2-numpydoc" ,python2-numpydoc) ("python2-matplotlib" ,python2-matplotlib) - ,@(alist-delete "python-numpydoc" + ,@(alist-delete "python-numpydoc" (alist-delete "python-matplotlib" (package-inputs numpy)))))))) @@ -2117,15 +2106,15 @@ capabilities.") (alist-cons-after 'install 'install-doc (lambda* (#:key outputs #:allow-other-keys) - (let* ((doc (string-append (assoc-ref outputs "doc") + (let* ((doc (string-append (assoc-ref outputs "doc") "/share/doc/" ,name "-" ,version)) (html-doc (string-append doc "/html")) (examples (string-append doc "/examples"))) (mkdir-p html-doc) (mkdir-p examples) - (for-each + (for-each (lambda (dir tgt) - (map (lambda (file) + (map (lambda (file) (copy-file file (string-append tgt "/" (basename file)))) (find-files dir ".*"))) (list "docs" "htmldoc" "examples") @@ -2150,7 +2139,7 @@ that client code uses to construct the grammar directly in Python code.") (source (origin (method url-fetch) - (uri (string-append + (uri (string-append "https://pypi.python.org/packages/source/n/numpydoc/numpydoc-" version ".tar.gz")) (sha256 @@ -2170,7 +2159,7 @@ that client code uses to construct the grammar directly in Python code.") (license bsd-2))) (define-public python2-numpydoc - (package + (package (inherit (package-with-python2 python-numpydoc)) ;; With python-2 1 test (out of 30) fails because it doesn't find ;; matplotlib. With python-3 it seems to detect at run-time the absence @@ -2297,16 +2286,16 @@ toolkits.") (package (inherit matplotlib) ;; Make sure we use exactly PYTHON2-NUMPYDOC, which is ;; customized for Python 2. - (propagated-inputs + (propagated-inputs `(("python2-py2cairo" ,python2-py2cairo) ("python2-pygobject-2" ,python2-pygobject-2) ,@(alist-delete "python-pycairo" (alist-delete "python-pygobject" - (package-propagated-inputs + (package-propagated-inputs matplotlib))))) - (inputs + (inputs `(("python2-numpydoc" ,python2-numpydoc) - ,@(alist-delete "python-numpydoc" + ,@(alist-delete "python-numpydoc" (package-inputs matplotlib))))))) (define-public python-scipy @@ -2340,13 +2329,13 @@ toolkits.") 'build 'set-environment-variables (lambda* (#:key inputs #:allow-other-keys) (let* ((atlas-threaded - (string-append (assoc-ref inputs "atlas") + (string-append (assoc-ref inputs "atlas") "/lib/libtatlas.so")) ;; On single core CPUs only the serial library is created. (atlas-lib (if (file-exists? atlas-threaded) atlas-threaded - (string-append (assoc-ref inputs "atlas") + (string-append (assoc-ref inputs "atlas") "/lib/libsatlas.so")))) (setenv "ATLAS" atlas-lib))) (alist-cons-after @@ -2385,11 +2374,11 @@ toolkits.") ;; within the source directory. (alist-cons-after 'install 'check - (lambda _ + (lambda _ (with-directory-excursion "/tmp" (zero? (system* "python" "-c" "import scipy; scipy.test()")))) - (alist-delete - 'check + (alist-delete + 'check %standard-phases)))))) (home-page "http://www.scipy.org/") (synopsis "The Scipy library provides efficient numerical routines") @@ -2404,8 +2393,8 @@ routines such as routines for numerical integration and optimization.") ;; Use packages customized for python-2. (inputs `(("python2-matplotlib" ,python2-matplotlib) ("python2-numpy" ,python2-numpy) - ,@(alist-delete "python-matplotlib" - (alist-delete "python-numpy" + ,@(alist-delete "python-matplotlib" + (alist-delete "python-numpy" (package-inputs scipy)))))))) (define-public python-sqlalchemy @@ -2572,7 +2561,7 @@ a general image processing tool.") `(("pkg-config" ,pkg-config) ("python-setuptools" ,python-setuptools))) (arguments - `(#:phases + `(#:phases (alist-replace 'check (lambda _ @@ -2611,7 +2600,7 @@ a front-end for C compilers or analysis tools.") (method url-fetch) (uri (string-append "https://pypi.python.org/packages/source/c/" "cffi/cffi-" version ".tar.gz")) - (sha256 + (sha256 (base32 "0406j3sgndmx88idv5zxkkrwfqxmjl18pj8gf47nsg4ymzixjci5")))) (build-system python-build-system) (outputs '("out" "doc")) @@ -2625,7 +2614,7 @@ a front-end for C compilers or analysis tools.") ("python-setuptools" ,python-setuptools))) (arguments `(#:tests? #f ; FIXME: requires pytest - #:phases + #:phases (alist-cons-after 'install 'install-doc (lambda* (#:key outputs #:allow-other-keys) @@ -2668,7 +2657,7 @@ a front-end for C compilers or analysis tools.") (propagated-inputs `(("python-cffi" ,python-cffi))) ; used at run time (arguments - `(#:phases + `(#:phases (alist-cons-after 'install 'install-doc (lambda* (#:key outputs #:allow-other-keys) @@ -2714,14 +2703,14 @@ support for Python 3 and PyPy. It is based on cffi.") (propagated-inputs `(("python-xcffib" ,python-xcffib))) ; used at run time (arguments - `(#:phases + `(#:phases (alist-cons-after 'install 'install-doc (lambda* (#:key inputs outputs #:allow-other-keys) (let* ((data (string-append (assoc-ref outputs "doc") "/share")) (doc (string-append data "/doc/" ,name "-" ,version)) (html (string-append doc "/html"))) - (setenv "LD_LIBRARY_PATH" + (setenv "LD_LIBRARY_PATH" (string-append (assoc-ref inputs "cairo") "/lib" ":" (assoc-ref inputs "gdk-pixbuf") "/lib")) (setenv "LANG" "en_US.UTF-8") @@ -2772,7 +2761,7 @@ PNG, PostScript, PDF, and SVG file output.") ("texinfo" ,texinfo) ("python-setuptools" ,python-setuptools))) (arguments - `(#:phases + `(#:phases (alist-cons-after 'install 'install-doc (lambda* (#:key inputs outputs #:allow-other-keys) @@ -2808,8 +2797,8 @@ PNG, PostScript, PDF, and SVG file output.") ;; (zero? (system* (string-append (assoc-ref outputs "out") ;; "/bin/iptest")))) #t) - (alist-delete - 'check + (alist-delete + 'check %standard-phases))))) (home-page "http://ipython.org") (synopsis "IPython is a tool for interactive computing in Python") @@ -2824,7 +2813,7 @@ computing.") (let ((ipython (package-with-python2 python-ipython))) (package (inherit ipython) ;; Make sure we use custom python2-NAME packages. - (inputs + (inputs `(("python2-numpydoc" ,python2-numpydoc) ("python2-matplotlib" ,python2-matplotlib) ,@(alist-delete "python-numpydoc" |