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| author | Roel Janssen <roel@gnu.org> | 2020-11-18 17:24:59 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-12-09 12:12:45 +0100 |
| commit | a23310ffc24f077dac9c1bd6c93d57791f583b55 (patch) | |
| tree | 7f353a59233c8845e8674acc40b903b06d702185 /gnu | |
| parent | aca4ebe40ae4b4e280ecb093382daa9ab5bd0ef9 (diff) | |
| download | guix-a23310ffc24f077dac9c1bd6c93d57791f583b55.tar guix-a23310ffc24f077dac9c1bd6c93d57791f583b55.tar.gz | |
gnu: Add r-bluster.
* gnu/packages/bioconductor.scm (r-bluster): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ce64a3052f..78ad278893 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -72,6 +72,35 @@ database, assembled using data from REACTOME.") (license license:cc-by4.0))) +(define-public r-bluster + (package + (name "r-bluster") + (version "1.0.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "bluster" version)) + (sha256 + (base32 + "0izrf82m5znyrgai5y5jss4k2brabh4ajxdvnlwwc92l5bw7jp61")))) + (properties `((upstream-name . "bluster"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocneighbors" ,r-biocneighbors) + ("r-biocparallel" ,r-biocparallel) + ("r-igraph" ,r-igraph) + ("r-matrix" ,r-matrix) + ("r-rcpp" ,r-rcpp) + ("r-s4vectors" ,r-s4vectors))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://bioconductor.org/packages/bluster") + (synopsis "Clustering algorithms for Bioconductor") + (description"This package wraps common clustering algorithms in an easily +extended S4 framework. Backends are implemented for hierarchical, k-means +and graph-based clustering. Several utilities are also provided to compare +and evaluate clustering results.") + (license license:gpl3))) + (define-public r-bsgenome-celegans-ucsc-ce6 (package (name "r-bsgenome-celegans-ucsc-ce6") |