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authorMark H Weaver <mhw@netris.org>2018-03-20 00:49:05 -0400
committerMark H Weaver <mhw@netris.org>2018-03-20 00:49:05 -0400
commit647888845c0d7b9ea1b51a3e3492d4d2382f4468 (patch)
treebe34c5ec88db452c63253dc4a15f9f4cf199b1e6 /gnu
parentfe15613cdf8623574ce64c05416dd3fab41eef86 (diff)
parentc657716ede8932da356635802534aa13205a6ecd (diff)
downloadguix-647888845c0d7b9ea1b51a3e3492d4d2382f4468.tar
guix-647888845c0d7b9ea1b51a3e3492d4d2382f4468.tar.gz
Merge branch 'master' into core-updates
Diffstat (limited to 'gnu')
-rw-r--r--gnu/build/linux-modules.scm19
-rw-r--r--gnu/local.mk3
-rw-r--r--gnu/packages/android.scm2
-rw-r--r--gnu/packages/avahi.scm16
-rw-r--r--gnu/packages/bash.scm5
-rw-r--r--gnu/packages/bioinformatics.scm60
-rw-r--r--gnu/packages/bootloaders.scm2
-rw-r--r--gnu/packages/build-tools.scm2
-rw-r--r--gnu/packages/chemistry.scm4
-rw-r--r--gnu/packages/code.scm4
-rw-r--r--gnu/packages/compression.scm21
-rw-r--r--gnu/packages/connman.scm4
-rw-r--r--gnu/packages/cran.scm69
-rw-r--r--gnu/packages/crypto.scm2
-rw-r--r--gnu/packages/databases.scm8
-rw-r--r--gnu/packages/datamash.scm4
-rw-r--r--gnu/packages/django.scm4
-rw-r--r--gnu/packages/dns.scm13
-rw-r--r--gnu/packages/elf.scm2
-rw-r--r--gnu/packages/emacs.scm2
-rw-r--r--gnu/packages/emulators.scm2
-rw-r--r--gnu/packages/engineering.scm4
-rw-r--r--gnu/packages/enlightenment.scm5
-rw-r--r--gnu/packages/file-systems.scm2
-rw-r--r--gnu/packages/flashing-tools.scm6
-rw-r--r--gnu/packages/freedesktop.scm6
-rw-r--r--gnu/packages/fvwm.scm21
-rw-r--r--gnu/packages/games.scm26
-rw-r--r--gnu/packages/gimp.scm12
-rw-r--r--gnu/packages/gl.scm2
-rw-r--r--gnu/packages/gnome.scm6
-rw-r--r--gnu/packages/gnuzilla.scm5
-rw-r--r--gnu/packages/golang.scm52
-rw-r--r--gnu/packages/graph.scm2
-rw-r--r--gnu/packages/graphics.scm27
-rw-r--r--gnu/packages/guile.scm119
-rw-r--r--gnu/packages/haskell.scm21
-rw-r--r--gnu/packages/image.scm4
-rw-r--r--gnu/packages/imagemagick.scm4
-rw-r--r--gnu/packages/irc.scm6
-rw-r--r--gnu/packages/kde-frameworks.scm36
-rw-r--r--gnu/packages/linux.scm48
-rw-r--r--gnu/packages/lua.scm10
-rw-r--r--gnu/packages/mail.scm2
-rw-r--r--gnu/packages/make-bootstrap.scm2
-rw-r--r--gnu/packages/maths.scm34
-rw-r--r--gnu/packages/messaging.scm12
-rw-r--r--gnu/packages/monitoring.scm31
-rw-r--r--gnu/packages/music.scm10
-rw-r--r--gnu/packages/networking.scm20
-rw-r--r--gnu/packages/ocaml.scm6
-rw-r--r--gnu/packages/onc-rpc.scm8
-rw-r--r--gnu/packages/openstack.scm12
-rw-r--r--gnu/packages/password-utils.scm4
-rw-r--r--gnu/packages/patches/bash-completion-directories.patch8
-rw-r--r--gnu/packages/patches/java-simple-xml-fix-tests.patch37
-rw-r--r--gnu/packages/patches/libtirpc-missing-headers.patch40
-rw-r--r--gnu/packages/perl.scm6
-rw-r--r--gnu/packages/photo.scm2
-rw-r--r--gnu/packages/protobuf.scm6
-rw-r--r--gnu/packages/python-crypto.scm19
-rw-r--r--gnu/packages/python-web.scm2
-rw-r--r--gnu/packages/python.scm58
-rw-r--r--gnu/packages/qt.scm2
-rw-r--r--gnu/packages/ratpoison.scm2
-rw-r--r--gnu/packages/rdesktop.scm7
-rw-r--r--gnu/packages/ruby.scm260
-rw-r--r--gnu/packages/sdl.scm6
-rw-r--r--gnu/packages/serialization.scm8
-rw-r--r--gnu/packages/sml.scm2
-rw-r--r--gnu/packages/statistics.scm8
-rw-r--r--gnu/packages/syncthing.scm6
-rw-r--r--gnu/packages/terminals.scm33
-rw-r--r--gnu/packages/terraform.scm52
-rw-r--r--gnu/packages/tex.scm2
-rw-r--r--gnu/packages/text-editors.scm8
-rw-r--r--gnu/packages/tls.scm6
-rw-r--r--gnu/packages/video.scm8
-rw-r--r--gnu/packages/virtualization.scm2
-rw-r--r--gnu/packages/vulkan.scm140
-rw-r--r--gnu/packages/web.scm20
-rw-r--r--gnu/packages/wget.scm28
-rw-r--r--gnu/packages/wine.scm15
-rw-r--r--gnu/packages/wm.scm2
-rw-r--r--gnu/packages/xdisorg.scm10
-rw-r--r--gnu/packages/xml.scm15
-rw-r--r--gnu/packages/xorg.scm2
-rw-r--r--gnu/services/databases.scm8
-rw-r--r--gnu/services/mcron.scm8
-rw-r--r--gnu/services/ssh.scm7
-rw-r--r--gnu/system/vm.scm1
-rw-r--r--gnu/tests/base.scm4
92 files changed, 1084 insertions, 579 deletions
diff --git a/gnu/build/linux-modules.scm b/gnu/build/linux-modules.scm
index 4fe673cca2..87d2e98edf 100644
--- a/gnu/build/linux-modules.scm
+++ b/gnu/build/linux-modules.scm
@@ -206,7 +206,9 @@ appears in BLACK-LIST are not loaded."
(define (load-dependencies file)
(let ((dependencies (module-dependencies file)))
- (every (cut load-linux-module* <> #:lookup-module lookup-module)
+ (every (cut load-linux-module* <>
+ #:lookup-module lookup-module
+ #:black-list black-list)
(map lookup-module dependencies))))
(and (not (black-listed? (file-name->module-name file)))
@@ -327,7 +329,7 @@ The modules corresponding to these aliases can then be found using
list of alias/module pairs where each alias is a glob pattern as like the
result of:
- (compile-glob-pattern \"scsi:t-0x01*\")
+ (string->compiled-sglob \"scsi:t-0x01*\")
and each module is a module name like \"snd_hda_intel\"."
(define (comment? str)
@@ -352,17 +354,20 @@ and each module is a module name like \"snd_hda_intel\"."
(line
(match (tokenize line)
(("alias" alias module)
- (loop (alist-cons (compile-glob-pattern alias) module
+ (loop (alist-cons (string->compiled-sglob alias) module
aliases)))
(() ;empty line
(loop aliases)))))))
-(define (current-alias-file)
- "Return the absolute file name of the default 'modules.alias' file."
+(define (current-kernel-directory)
+ "Return the directory of the currently running Linux kernel."
(string-append (or (getenv "LINUX_MODULE_DIRECTORY")
"/run/booted-system/kernel/lib/modules")
- "/" (utsname:release (uname))
- "/" "modules.alias"))
+ "/" (utsname:release (uname))))
+
+(define (current-alias-file)
+ "Return the absolute file name of the default 'modules.alias' file."
+ (string-append (current-kernel-directory) "/modules.alias"))
(define* (known-module-aliases #:optional (alias-file (current-alias-file)))
"Return the list of alias/module pairs read from ALIAS-FILE. Each alias is
diff --git a/gnu/local.mk b/gnu/local.mk
index a03b482df2..bc30cbae2a 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -411,6 +411,7 @@ GNU_SYSTEM_MODULES = \
%D%/packages/tcl.scm \
%D%/packages/telephony.scm \
%D%/packages/terminals.scm \
+ %D%/packages/terraform.scm \
%D%/packages/texinfo.scm \
%D%/packages/tex.scm \
%D%/packages/textutils.scm \
@@ -787,6 +788,7 @@ dist_patch_DATA = \
%D%/packages/patches/jacal-fix-texinfo.patch \
%D%/packages/patches/java-jeromq-fix-tests.patch \
%D%/packages/patches/java-powermock-fix-java-files.patch \
+ %D%/packages/patches/java-simple-xml-fix-tests.patch \
%D%/packages/patches/java-xerces-bootclasspath.patch \
%D%/packages/patches/java-xerces-build_dont_unzip.patch \
%D%/packages/patches/java-xerces-xjavac_taskdef.patch \
@@ -858,7 +860,6 @@ dist_patch_DATA = \
%D%/packages/patches/libssh2-fix-build-failure-with-gcrypt.patch \
%D%/packages/patches/libtar-CVE-2013-4420.patch \
%D%/packages/patches/libtheora-config-guess.patch \
- %D%/packages/patches/libtirpc-missing-headers.patch \
%D%/packages/patches/libtiff-CVE-2017-9935.patch \
%D%/packages/patches/libtiff-CVE-2017-18013.patch \
%D%/packages/patches/libtool-skip-tests2.patch \
diff --git a/gnu/packages/android.scm b/gnu/packages/android.scm
index 6baefbca96..637cda0205 100644
--- a/gnu/packages/android.scm
+++ b/gnu/packages/android.scm
@@ -457,7 +457,7 @@ def _FindRepo():
;; TODO: Add git-remote-persistent-https once it is available in guix
`(("git" ,git)
("gnupg" ,gnupg)
- ("ssh", openssh)))
+ ("ssh" ,openssh)))
(native-inputs
`(("nose" ,python2-nose)))
(home-page "https://code.google.com/p/git-repo/")
diff --git a/gnu/packages/avahi.scm b/gnu/packages/avahi.scm
index 480b5e8d97..7734028dc3 100644
--- a/gnu/packages/avahi.scm
+++ b/gnu/packages/avahi.scm
@@ -99,10 +99,18 @@ DNS-SD (for \"DNS-Based Service Discovery\") protocols.")
(method url-fetch))))))
(build-system gnu-build-system)
(arguments
- ;; The Avahi daemon socket is expected by src/Makefile.am to be at
- ;; "$(localstatedir)/run/avahi-daemon/socket", so set $(localstatedir)
- ;; appropriately.
- '(#:configure-flags '("--localstatedir=/var")))
+ '(#:phases (modify-phases %standard-phases
+ (add-after 'unpack 'set-avahi-socket-name
+ (lambda _
+ ;; The Avahi daemon socket is expected by
+ ;; src/Makefile.am to be at
+ ;; "$(localstatedir)/run/avahi-daemon/socket", but
+ ;; nowadays it lives in /run/avahi-daemon/socket.
+ ;; Remove the "$(localstatedir)" bit.
+ (substitute* "src/Makefile.in"
+ (("\\$\\(localstatedir)/run/avahi-daemon/socket")
+ "/run/avahi-daemon/socket"))
+ #t)))))
(synopsis "Multicast DNS Name Service Switch (@dfn{NSS}) plug-in")
(description
"Nss-mdns is a plug-in for the GNU C Library's Name Service Switch
diff --git a/gnu/packages/bash.scm b/gnu/packages/bash.scm
index 52d93e8e7e..64f7782f58 100644
--- a/gnu/packages/bash.scm
+++ b/gnu/packages/bash.scm
@@ -3,6 +3,7 @@
;;; Copyright © 2014, 2015, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015, 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -269,7 +270,7 @@ without modification.")
(define-public bash-completion
(package
(name "bash-completion")
- (version "2.7")
+ (version "2.8")
(source (origin
(method url-fetch)
(uri (string-append
@@ -277,7 +278,7 @@ without modification.")
version "/" name "-" version ".tar.xz"))
(sha256
(base32
- "07j484vb3k90f4989xh1g1x99g01akrp69p3dml4lza27wnqkfj1"))
+ "0kgmflrr1ga9wfk770vmakna3nj46ylb5ky9ipd0v2k9ymq5a7y0"))
(patches
(search-patches "bash-completion-directories.patch"))))
(build-system gnu-build-system)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 426618147f..31ca5b2521 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8448,7 +8448,7 @@ paired-end data.")
("r-testthat" ,r-testthat)
;; During vignette building knitr checks that "pandoc-citeproc"
;; is in the PATH.
- ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc)))
+ ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc-with-pandoc-1)))
(propagated-inputs
`(("r-data-table" ,r-data-table)
("r-biomart" ,r-biomart)
@@ -11521,7 +11521,7 @@ Browser.")
(delete 'configure)
(delete 'build)
(replace 'install
- (lambda* (#:key outputs #:allow-other-keys)
+ (lambda* (#:key inputs outputs #:allow-other-keys)
(let ((bin (string-append (assoc-ref outputs "out")
"/bin"))
(docdir (string-append (assoc-ref outputs "out")
@@ -11544,7 +11544,16 @@ Browser.")
scripts)
(for-each (lambda (file) (install-file file docdir))
docs)
+ ;; Fix references to gunzip
+ (substitute* (map (lambda (file)
+ (string-append bin "/" file))
+ scripts)
+ (("\"gunzip -c")
+ (string-append "\"" (assoc-ref inputs "gzip")
+ "/bin/gunzip -c")))
#t))))))
+ (inputs
+ `(("gzip" ,gzip)))
(home-page "http://www.bioinformatics.babraham.ac.uk/projects/bismark/")
(synopsis "Map bisulfite treated sequence reads and analyze methylation")
(description "Bismark is a program to map bisulfite treated sequencing
@@ -12729,8 +12738,8 @@ once. This package provides tools to perform Drop-seq analyses.")
("r-rtracklayer" ,r-rtracklayer)
("r-rjson" ,r-rjson)
("salmon" ,salmon)
- ("ghc-pandoc" ,ghc-pandoc)
- ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc)
+ ("ghc-pandoc" ,ghc-pandoc-1)
+ ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc-with-pandoc-1)
("python-wrapper" ,python-wrapper)
("python-pyyaml" ,python-pyyaml)))
(home-page "http://bioinformatics.mdc-berlin.de/pigx/")
@@ -12746,7 +12755,7 @@ expression report comparing samples in an easily configurable manner.")
(define-public pigx-chipseq
(package
(name "pigx-chipseq")
- (version "0.0.2")
+ (version "0.0.8")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_chipseq/"
@@ -12754,10 +12763,11 @@ expression report comparing samples in an easily configurable manner.")
"/pigx_chipseq-" version ".tar.gz"))
(sha256
(base32
- "1jliwhifnjgl9x0z730bzpxswi2s84fyg5y8cagbyzpw509452f5"))))
+ "1plw0bz0b7flj0g9irbn8n520005lmajkiq5flpizzapsl0a0r9g"))))
(build-system gnu-build-system)
(arguments
- `(#:phases
+ `(#:tests? #f ; parts of the tests rely on access to the network
+ #:phases
(modify-phases %standard-phases
(add-after 'install 'wrap-executable
;; Make sure the executable finds all R modules.
@@ -12782,13 +12792,16 @@ expression report comparing samples in an easily configurable manner.")
("r-ggplot2" ,r-ggplot2)
("r-plotly" ,r-plotly)
("python-wrapper" ,python-wrapper)
+ ("python-magic" ,python-magic)
("python-pyyaml" ,python-pyyaml)
+ ("python-xlrd" ,python-xlrd)
("snakemake" ,snakemake)
+ ("trim-galore" ,trim-galore)
("macs" ,macs)
("multiqc" ,multiqc)
("perl" ,perl)
- ("ghc-pandoc" ,ghc-pandoc)
- ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc)
+ ("ghc-pandoc" ,ghc-pandoc-1)
+ ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc-with-pandoc-1)
("fastqc" ,fastqc)
("bowtie" ,bowtie)
("idr" ,idr)
@@ -12812,7 +12825,7 @@ in an easily configurable manner.")
(define-public pigx-bsseq
(package
(name "pigx-bsseq")
- (version "0.0.5")
+ (version "0.0.7")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_bsseq/"
@@ -12820,7 +12833,7 @@ in an easily configurable manner.")
"/pigx_bsseq-" version ".tar.gz"))
(sha256
(base32
- "1h8ma99vi7hs83nafvjpq8jmaq9977j3n11c4zd95hai0cf7zxmp"))))
+ "0pw797gxx6x1n56lyrvglj7q5hqq4ylfqkvlcrzq1z3j5lxcyl69"))))
(build-system gnu-build-system)
(arguments
`(#:phases
@@ -12844,7 +12857,10 @@ in an easily configurable manner.")
(native-inputs
`(("tzdata" ,tzdata)))
(inputs
- `(("r-minimal" ,r-minimal)
+ `(("coreutils" ,coreutils)
+ ("sed" ,sed)
+ ("grep" ,grep)
+ ("r-minimal" ,r-minimal)
("r-annotationhub" ,r-annotationhub)
("r-dt" ,r-dt)
("r-genomation" ,r-genomation)
@@ -12854,8 +12870,8 @@ in an easily configurable manner.")
("r-bookdown" ,r-bookdown)
("r-ggplot2" ,r-ggplot2)
("r-ggbio" ,r-ggbio)
- ("ghc-pandoc" ,ghc-pandoc)
- ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc)
+ ("ghc-pandoc" ,ghc-pandoc-1)
+ ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc-with-pandoc-1)
("python-wrapper" ,python-wrapper)
("python-pyyaml" ,python-pyyaml)
("snakemake" ,snakemake)
@@ -12876,7 +12892,7 @@ methylation and segmentation.")
(define-public pigx-scrnaseq
(package
(name "pigx-scrnaseq")
- (version "0.0.2")
+ (version "0.0.3")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_scrnaseq/"
@@ -12884,7 +12900,7 @@ methylation and segmentation.")
"/pigx_scrnaseq-" version ".tar.gz"))
(sha256
(base32
- "03gwp83823ji59y6nvyz89i4yd3faaqpc3791qia71i91470vfsg"))))
+ "12qdq0nj1wdkyighdxj6924bmbpd1a0b3gam6w64l4hiqrv5sijz"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@@ -12903,7 +12919,9 @@ methylation and segmentation.")
`("PYTHONPATH" ":" = (,(getenv "PYTHONPATH")))))
#t)))))
(inputs
- `(("dropseq-tools" ,dropseq-tools)
+ `(("coreutils" ,coreutils)
+ ("perl" ,perl)
+ ("dropseq-tools" ,dropseq-tools)
("fastqc" ,fastqc)
("java-picard" ,java-picard)
("java" ,icedtea-8)
@@ -12912,8 +12930,8 @@ methylation and segmentation.")
("python-pandas" ,python-pandas)
("python-numpy" ,python-numpy)
("python-loompy" ,python-loompy)
- ("ghc-pandoc" ,ghc-pandoc)
- ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc)
+ ("ghc-pandoc" ,ghc-pandoc-1)
+ ("ghc-pandoc-citeproc" ,ghc-pandoc-citeproc-with-pandoc-1)
("snakemake" ,snakemake)
("star" ,star)
("r-minimal" ,r-minimal)
@@ -12953,7 +12971,7 @@ based methods.")
(define-public pigx
(package
(name "pigx")
- (version "0.0.1")
+ (version "0.0.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx/"
@@ -12961,7 +12979,7 @@ based methods.")
"/pigx-" version ".tar.gz"))
(sha256
(base32
- "1nxb2hbp40yg3j7n56k4dhsd2fl1j8g0wpiiln56prqzljwnlgmf"))))
+ "0sb708sl42h3s5z872jb1w70bbqplwapnsc1wm27zcsvi7li4gw8"))))
(build-system gnu-build-system)
(inputs
`(("python" ,python)
diff --git a/gnu/packages/bootloaders.scm b/gnu/packages/bootloaders.scm
index 9ea8748a5b..582c71cc4a 100644
--- a/gnu/packages/bootloaders.scm
+++ b/gnu/packages/bootloaders.scm
@@ -181,7 +181,7 @@ menu to select one of the installed operating systems.")
(synopsis "GRand Unified Boot loader (UEFI version)")
(inputs
`(("efibootmgr" ,efibootmgr)
- ("mtools", mtools)
+ ("mtools" ,mtools)
,@(package-inputs grub)))
(arguments
`(;; TODO: Tests need a UEFI firmware for qemu. There is one at
diff --git a/gnu/packages/build-tools.scm b/gnu/packages/build-tools.scm
index 2abb44fdb8..73eacf7df2 100644
--- a/gnu/packages/build-tools.scm
+++ b/gnu/packages/build-tools.scm
@@ -81,7 +81,7 @@ makes a few sacrifices to acquire fast full and incremental build times.")
(base32
"06r8limj38mv884s5riiz6lpzw37cvhbf9jd0smzcbi7fwmv3yah"))))
(build-system python-build-system)
- (inputs `(("ninja", ninja)))
+ (inputs `(("ninja" ,ninja)))
(propagated-inputs `(("python" ,python)))
(home-page "https://mesonbuild.com/")
(synopsis "Build system designed to be fast and user-friendly")
diff --git a/gnu/packages/chemistry.scm b/gnu/packages/chemistry.scm
index ed883072b4..f1359b2cf6 100644
--- a/gnu/packages/chemistry.scm
+++ b/gnu/packages/chemistry.scm
@@ -73,8 +73,8 @@ only with Python 2 and NumPy < 1.9.")
(build-system python-build-system)
(inputs
`(("python-matplotlib" ,(with-numpy-1.8 python2-matplotlib))
- ("python-scientific", python2-scientific)
- ("netcdf", netcdf)
+ ("python-scientific" ,python2-scientific)
+ ("netcdf" ,netcdf)
("gv" ,gv)))
(propagated-inputs
`(("python-mmtk" ,python2-mmtk)))
diff --git a/gnu/packages/code.scm b/gnu/packages/code.scm
index d454056668..fa5a119819 100644
--- a/gnu/packages/code.scm
+++ b/gnu/packages/code.scm
@@ -421,9 +421,9 @@ functionality such as HTML output.")
"0scjbp1z201q8njvrxqz7lk2m9b6k2rxd5q1shrng6532r7ndif2"))))
(build-system cmake-build-system)
(arguments
- '(#:configure-flags
+ '(#:build-type "RelWithDebInfo"
+ #:configure-flags
'("-DRTAGS_NO_ELISP_FILES=1"
- "-DCMAKE_BUILD_TYPE=RelWithDebInfo"
"-DCMAKE_CXX_FLAGS=-std=c++11"
"-DBUILD_TESTING=FALSE")
#:tests? #f))
diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm
index dbf4f925a3..c44882b23c 100644
--- a/gnu/packages/compression.scm
+++ b/gnu/packages/compression.scm
@@ -1661,7 +1661,7 @@ speed.")
(source (package-source zstd))
(build-system gnu-build-system)
(native-inputs
- `(("googletest", googletest)))
+ `(("googletest" ,googletest)))
(arguments
`(#:phases
(modify-phases %standard-phases
@@ -1800,16 +1800,15 @@ recreates the stored directory structure by default.")
(define-public zziplib
(package
(name "zziplib")
- (version "0.13.68")
+ (version "0.13.69")
+ (home-page "https://github.com/gdraheim/zziplib")
(source
(origin
(method url-fetch)
- (uri (string-append "mirror://sourceforge/zziplib/zziplib13/"
- version "/zziplib-"
- version ".tar.bz2"))
+ (uri (string-append home-page "/archive/v" version ".tar.gz"))
(sha256
(base32
- "1s0wz1hf2q4qxcp4lkg4rzpbz2814xagmvlyicqdj0ww0cvxv036"))))
+ "0i052a7shww0fzsxrdp3rd7g4mbzx7324a8ysbc0br7frpblcql4"))))
(build-system gnu-build-system)
(inputs
`(("zlib" ,zlib)))
@@ -1819,16 +1818,12 @@ recreates the stored directory structure by default.")
;; http://forums.gentoo.org/viewtopic-t-863161-start-0.html
("python" ,python-2)
("zip" ,zip))) ; to create test files
- (arguments
- ;; XXX: "make check" is broken, and the alternative (test/zziptests.py)
- ;; requires network access. See <https://github.com/gdraheim/zziplib/issues/20>
- ;; and <https://github.com/gdraheim/zziplib/issues/24>.
- `(#:tests? #f))
- (home-page "http://zziplib.sourceforge.net/")
(synopsis "Library for accessing zip files")
(description
"ZZipLib is a library based on zlib for accessing zip files.")
- (license license:lgpl2.0+)))
+ ;; zziplib is dual licensed under LGPL2.0+ and MPL1.1. Some example source
+ ;; files carry the Zlib license; see "docs/copying.html" for details.
+ (license (list license:lgpl2.0+ license:mpl1.1))))
(define-public perl-archive-zip
(package
diff --git a/gnu/packages/connman.scm b/gnu/packages/connman.scm
index 25756019fd..7e87cd8968 100644
--- a/gnu/packages/connman.scm
+++ b/gnu/packages/connman.scm
@@ -70,7 +70,7 @@
(string-append
"--with-dbusdatadir=" (assoc-ref %outputs "out") "/share"))))
(native-inputs
- `(("pkg-config", pkg-config)
+ `(("pkg-config" ,pkg-config)
("python" ,python-2)))
(inputs
`(("dbus" ,dbus)
@@ -84,7 +84,7 @@
;; TODO: add neard, ofono
("openconnect" ,openconnect)
("openvpn" ,openvpn)
- ("ppp", ppp)
+ ("ppp" ,ppp)
("vpnc" ,vpnc)
("wpa-supplicant" ,wpa-supplicant)))
(home-page "https://01.org/connman")
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 9b045c122f..b54ddc6b55 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -3,6 +3,7 @@
;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Raoul Bonnal <ilpuccio.febo@gmail.com>
+;;; Copyright © 2018 Vijayalakshmi Vedantham <vijimay12@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -59,6 +60,36 @@ diversification and macroevolution, computing distances from DNA sequences,
and several other tools.")
(license license:gpl2+)))
+(define-public r-abbyyr
+ (package
+ (name "r-abbyyr")
+ (version "0.5.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "abbyyR" version))
+ (sha256
+ (base32
+ "1s8zf18sh0s89vk3dl09fzrq50csmmfvmsanf5vfkv9n5lx6pklg"))))
+ (properties `((upstream-name . "abbyyR")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-curl" ,r-curl)
+ ("r-httr" ,r-httr)
+ ("r-plyr" ,r-plyr)
+ ("r-progress" ,r-progress)
+ ("r-readr" ,r-readr)
+ ("r-xml" ,r-xml)))
+ (home-page "https://github.com/soodoku/abbyyR")
+ (synopsis "Access to Abbyy Optical Character Recognition (OCR) API")
+ (description
+ "This package provides tools to get text from images of text using Abbyy
+Cloud Optical Character Recognition (OCR) API. With abbyyyR, one can easily
+OCR images, barcodes, forms, documents with machine readable zones, e.g.
+passports and get the results in a variety of formats including plain text and
+XML. To learn more about the Abbyy OCR API, see @url{http://ocrsdk.com/}.")
+ (license license:expat)))
+
(define-public r-colorspace
(package
(name "r-colorspace")
@@ -1679,7 +1710,7 @@ simplifying cross-class interoperability.")
`(("r-quadprog" ,r-quadprog)
("r-xts" ,r-xts)
("r-zoo" ,r-zoo)))
- (home-page "http://r-forge.r-project.org/projects/returnanalytics/")
+ (home-page "https://r-forge.r-project.org/projects/returnanalytics/")
(synopsis "Econometric tools for performance and risk analysis")
(description "This is a collection of econometric functions for
performance and risk analysis. This package aims to aid practitioners and
@@ -1996,7 +2027,7 @@ traveling salesman problem).")
"0d2d1ni1camixyi45lfy00f4pn3p063k7bsi8gj5scp6n15mdgb0"))))
(build-system r-build-system)
(native-inputs `(("gfortran" ,gfortran)))
- (home-page "http://cran.r-project.org/web/packages/qap/")
+ (home-page "https://cran.r-project.org/web/packages/qap/")
(synopsis "Heuristics for the quadratic assignment problem (QAP)")
(description "This package implements heuristics for the @dfn{quadratic
assignment problem} (QAP). Currently only a simulated annealing heuristic is
@@ -2016,7 +2047,7 @@ available.")
"02ba6zj9bjwrzykamjp40ajynx9xjx9h2i85n0ym0r5lcki4x6fn"))))
(build-system r-build-system)
(propagated-inputs `(("r-cluster" ,r-cluster)))
- (home-page "http://cran.r-project.org/web/packages/gclus/")
+ (home-page "https://cran.r-project.org/web/packages/gclus/")
(synopsis "Clustering graphics")
(description "This package orders panels in scatterplot matrices and
parallel coordinate displays by some merit index. It contains various indices
@@ -2355,7 +2386,7 @@ rules with R.")
"11gjmn1azrjw5xlvdb4gknj9985kck9x8zb9np1rnk2smp6pka2m"))))
(build-system r-build-system)
(native-inputs `(("gfortran" ,gfortran)))
- (home-page "http://cran.r-project.org/web/packages/leaps/")
+ (home-page "https://cran.r-project.org/web/packages/leaps/")
(synopsis "Regression subset selection")
(description
"This package provides tools for regression subset selection, including
@@ -2376,7 +2407,7 @@ exhaustive search.")
(properties `((upstream-name . "splus2R")))
(build-system r-build-system)
(native-inputs `(("gfortran" ,gfortran)))
- (home-page "http://cran.r-project.org/web/packages/splus2R/")
+ (home-page "https://cran.r-project.org/web/packages/splus2R/")
(synopsis "Supplemental S-PLUS functionality in R")
(description
"Currently there are many functions in S-PLUS that are missing in R. To
@@ -2399,7 +2430,7 @@ provides some missing S-PLUS functionality in R.")
(propagated-inputs
`(("r-mass" ,r-mass)
("r-splus2r" ,r-splus2r)))
- (home-page "http://cran.r-project.org/web/packages/ifultools/")
+ (home-page "https://cran.r-project.org/web/packages/ifultools/")
(synopsis "Insightful research tools")
(description "This package provides C code used by the wmtsa, fractal, and
sapa R packages.")
@@ -2420,7 +2451,7 @@ sapa R packages.")
(propagated-inputs
`(("r-ifultools" ,r-ifultools)
("r-splus2r" ,r-splus2r)))
- (home-page "http://cran.r-project.org/web/packages/sapa/")
+ (home-page "https://cran.r-project.org/web/packages/sapa/")
(synopsis "Spectral analysis for physical applications")
(description "This package provides software for the book Spectral
Analysis for Physical Applications, Donald B. Percival and Andrew T. Walden,
@@ -2444,7 +2475,7 @@ Cambridge University Press, 1993.")
("r-ttr" ,r-ttr)
("r-xts" ,r-xts)
("r-zoo" ,r-zoo)))
- (home-page "http://cran.r-project.org/web/packages/quantmod/")
+ (home-page "https://cran.r-project.org/web/packages/quantmod/")
(synopsis "Quantitative financial modelling framework")
(description "This package provides a quantitative financial modelling
framework to allow users to specify, build, trade, and analyse quantitative
@@ -2469,7 +2500,7 @@ financial trading strategies.")
("r-zoo" ,r-zoo)))
(native-inputs
`(("gfortran" ,gfortran)))
- (home-page "http://cran.r-project.org/web/packages/tseries/")
+ (home-page "https://cran.r-project.org/web/packages/tseries/")
(synopsis "Time series analysis and computational finance")
(description
"This package provides functions relating to time series analysis and
@@ -2492,7 +2523,7 @@ computational finance.")
`(("r-ifultools" ,r-ifultools)
("r-mass" ,r-mass)
("r-splus2r" ,r-splus2r)))
- (home-page "http://cran.r-project.org/web/packages/wmtsa/")
+ (home-page "https://cran.r-project.org/web/packages/wmtsa/")
(synopsis "Wavelet methods for time series analysis")
(description
"This package provides software to accompany the book \"Wavelet Methods
@@ -2568,7 +2599,7 @@ multivariate distributions.")
("r-scatterplot3d" ,r-scatterplot3d)
("r-splus2r" ,r-splus2r)
("r-wmtsa" ,r-wmtsa)))
- (home-page "http://cran.r-project.org/web/packages/fractal/")
+ (home-page "https://cran.r-project.org/web/packages/fractal/")
(synopsis "Fractal time series modeling and analysis")
(description
"This package provides tools for stochastic fractal and deterministic
@@ -2589,7 +2620,7 @@ chaotic time series analysis.")
(build-system r-build-system)
(propagated-inputs `(("r-nlme" ,r-nlme)))
(native-inputs `(("gfortran" ,gfortran)))
- (home-page "http://cran.r-project.org/web/packages/urca/")
+ (home-page "https://cran.r-project.org/web/packages/urca/")
(synopsis "Unit root and cointegration tests for time series data")
(description
"This package provides unit root and cointegration tests encountered in
@@ -2637,7 +2668,7 @@ interface.")
`(("r-extradistr" ,r-extradistr)))
(native-inputs
`(("gfortran" ,gfortran)))
- (home-page "http://cran.r-project.org/web/packages/trend/")
+ (home-page "https://cran.r-project.org/web/packages/trend/")
(synopsis "Non-parametric trend tests and change-point detection")
(description
"The analysis of environmental data often requires the detection of
@@ -2666,7 +2697,7 @@ sample Robust Rank-Order Distributional Test.")
(build-system r-build-system)
(propagated-inputs `(("r-matrix" ,r-matrix)))
(native-inputs `(("gfortran" ,gfortran)))
- (home-page "http://r-forge.r-project.org/projects/expm/")
+ (home-page "https://r-forge.r-project.org/projects/expm/")
(synopsis "Tools for matrix exponentials and related quantities")
(description
"This package provides tools for the computation of the matrix
@@ -2688,7 +2719,7 @@ exponential, logarithm, square root, and related quantities.")
(propagated-inputs
`(("r-expm" ,r-expm)
("r-matrix" ,r-matrix)))
- (home-page "http://cran.r-project.org/web/packages/complexplus/")
+ (home-page "https://cran.r-project.org/web/packages/complexplus/")
(synopsis "Functions of complex or real variables")
(description
"This package extends several functions to the complex domain, including
@@ -2759,7 +2790,7 @@ ordered factor data types.")
("r-mass" ,r-mass)
("r-matrix" ,r-matrix)
("r-phontools" ,r-phontools)))
- (home-page "http://cran.r-project.org/web/packages/powerplus/")
+ (home-page "https://cran.r-project.org/web/packages/powerplus/")
(synopsis "Exponentiation operations")
(description
"This package provides tools for the computation of matrix and scalar
@@ -2966,7 +2997,7 @@ and within plot factors interact.")
(build-system r-build-system)
(propagated-inputs `(("r-mass" ,r-mass)))
(native-inputs `(("gfortran" ,gfortran)))
- (home-page "http://cran.r-project.org/web/packages/signal/")
+ (home-page "https://cran.r-project.org/web/packages/signal/")
(synopsis "Signal processing")
(description
"This package provides a set of signal processing functions originally
@@ -3075,7 +3106,7 @@ R itself can handle.")
(base32
"0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"))))
(build-system r-build-system)
- (home-page "http://cran.r-project.org/web/packages/abind/")
+ (home-page "https://cran.r-project.org/web/packages/abind/")
(synopsis "Combine multidimensional arrays")
(description
"This package provides tools to combine multidimensional arrays into a
@@ -3098,7 +3129,7 @@ extracting and replacing data in arrays.")
"03hvh92lq4i4w4mla9bvwrwb4626f4hvlxgdn57hamp70960vjyc"))))
(properties `((upstream-name . "PRROC")))
(build-system r-build-system)
- (home-page "http://cran.r-project.org/web/packages/PRROC/")
+ (home-page "https://cran.r-project.org/web/packages/PRROC/")
(synopsis "Precision-Recall and ROC curves for weighted and unweighted data")
(description
"This package computes the areas under the @dfn{precision-recall} (PR)
diff --git a/gnu/packages/crypto.scm b/gnu/packages/crypto.scm
index df0141b353..99a3b78b05 100644
--- a/gnu/packages/crypto.scm
+++ b/gnu/packages/crypto.scm
@@ -581,7 +581,7 @@ cryptographically-secure replacement for Perl's built-in @code{rand} function.
@item No matter how many numbers you see generated by the random number
generator, you cannot guess the future numbers, and you cannot guess the seed.
@item There are so many possible seeds that it would take decades, centuries,
-or millenia for an attacker to try them all.
+or millennia for an attacker to try them all.
@item The seed comes from a source that generates relatively strong random
data on your platform, so the seed itself will be as random as possible.
@end enumerate\n")
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index a54013b818..716c75d7f8 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -1360,7 +1360,7 @@ module, and nothing else.")
(define-public perl-sql-abstract
(package
(name "perl-sql-abstract")
- (version "1.84")
+ (version "1.85")
(source
(origin
(method url-fetch)
@@ -1368,7 +1368,7 @@ module, and nothing else.")
"SQL-Abstract-" version ".tar.gz"))
(sha256
(base32
- "0xayvgv6nic61jm3nhg41rzwgm8h83wfyazvpaks0z7asjillpv5"))))
+ "1aycggrvppy2zgkwwn85jkdz93n5gsx4dambrjk67k5067hayi4z"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-install" ,perl-module-install)
@@ -2769,9 +2769,9 @@ Monitor read/write activity on a mongo server
(setenv "JEMALLOC_HOME" (assoc-ref %build-inputs "jemalloc"))
(setenv "RAPIDJSON_HOME" (assoc-ref %build-inputs "rapidjson"))
#t)))
+ #:build-type "Release"
#:configure-flags
- (list "-DCMAKE_BUILD_TYPE=Release"
- "-DARROW_PYTHON=ON"
+ (list "-DARROW_PYTHON=ON"
;; Install to PREFIX/lib (the default is
;; PREFIX/lib64).
diff --git a/gnu/packages/datamash.scm b/gnu/packages/datamash.scm
index 60c9ba795b..e839a1d985 100644
--- a/gnu/packages/datamash.scm
+++ b/gnu/packages/datamash.scm
@@ -28,7 +28,7 @@
(define-public datamash
(package
(name "datamash")
- (version "1.2")
+ (version "1.3")
(source
(origin
(method url-fetch)
@@ -36,7 +36,7 @@
version ".tar.gz"))
(sha256
(base32
- "15jrv3ly0vgvwwi2qjmhi39n7wrklwifdk961wwfaxyc5jr6zm78"))))
+ "19jpcv4ryvbz0476d6dgpxpbjkpmih4q84wj06nslls338bm5fzf"))))
(native-inputs
`(("which" ,which) ;for tests
("perl" ,perl))) ;for help2man
diff --git a/gnu/packages/django.scm b/gnu/packages/django.scm
index a901af6f14..4501b5c745 100644
--- a/gnu/packages/django.scm
+++ b/gnu/packages/django.scm
@@ -75,7 +75,7 @@
(zero? (system* "python" "tests/runtests.py")))))))
;; TODO: Install extras/django_bash_completion.
(native-inputs
- `(("tzdata", tzdata-for-tests)
+ `(("tzdata" ,tzdata-for-tests)
;; bcrypt and argon2-cffi are extra requirements not yet in guix
;;("python-argon2-cffi" ,python-argon2-cffi) ; >= 16.1.0
;;("python-bcrypt" ,python-bcrypt) ; not py-bcrypt!
@@ -199,7 +199,7 @@ useful tools for testing Django applications and projects.")
(native-inputs
`(("python-django" ,python-django)
("python-djangorestframework" ,python-djangorestframework)
- ("python-django-crispy-forms", python-django-crispy-forms)
+ ("python-django-crispy-forms" ,python-django-crispy-forms)
("python-mock" ,python-mock)))
(home-page "https://django-filter.readthedocs.io/en/latest/")
(synopsis "Reusable Django application to filter querysets dynamically")
diff --git a/gnu/packages/dns.scm b/gnu/packages/dns.scm
index 735b2af9b4..78f3eff423 100644
--- a/gnu/packages/dns.scm
+++ b/gnu/packages/dns.scm
@@ -59,7 +59,7 @@
(define-public dnsmasq
(package
(name "dnsmasq")
- (version "2.78")
+ (version "2.79")
(source (origin
(method url-fetch)
(uri (string-append
@@ -67,7 +67,7 @@
version ".tar.xz"))
(sha256
(base32
- "0ar5h5v3kas2qx2wgy5iqin15gc4jhqrqs067xacgc3lii1rz549"))))
+ "07w6cw706yyahwvbvslhkrbjf2ynv567cgy9pal8bz8lrbsp9bbq"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -79,16 +79,15 @@
#:make-flags (list (string-append "PREFIX=" (assoc-ref %outputs "out"))
"CC=gcc"
"COPTS=\"-DHAVE_DBUS\"")
- ;; No 'check' target.
- #:tests? #f))
+ #:tests? #f)) ; no ‘check’ target
(home-page "http://www.thekelleys.org.uk/dnsmasq/doc.html")
(synopsis "Small caching DNS proxy and DHCP/TFTP server")
(description
- "Dnsmasq is a lightweight DNS forwarder and DHCP server. It is designed
-to provide DNS and optionally, DHCP, to a small network. It can serve the
+ "Dnsmasq is a light-weight DNS forwarder and DHCP server. It is designed
+to provide DNS and, optionally, DHCP to a small network. It can serve the
names of local machines which are not in the global DNS. The DHCP server
integrates with the DNS server and allows machines with DHCP-allocated
-addresses to appear in the DNS with names configured either in each host or in
+addresses to appear in the DNS with names configured either on each host or in
a central configuration file. Dnsmasq supports static and dynamic DHCP leases
and BOOTP/TFTP for network booting of diskless machines.")
;; Source files only say GPL2 and GPL3 are allowed.
diff --git a/gnu/packages/elf.scm b/gnu/packages/elf.scm
index 7ec189820d..0bac25c4e6 100644
--- a/gnu/packages/elf.scm
+++ b/gnu/packages/elf.scm
@@ -108,7 +108,7 @@ Executable and Linkable Format (@dfn{ELF}). This includes @command{ld},
(source (origin
(method url-fetch)
(uri (string-append
- "http://nixos.org/releases/patchelf/patchelf-"
+ "https://nixos.org/releases/patchelf/patchelf-"
version
"/patchelf-" version ".tar.bz2"))
(sha256
diff --git a/gnu/packages/emacs.scm b/gnu/packages/emacs.scm
index b6fa661f0e..186c1ae9f5 100644
--- a/gnu/packages/emacs.scm
+++ b/gnu/packages/emacs.scm
@@ -3780,7 +3780,7 @@ programming language.")
texlive-latex-seminar
texlive-latex-hyperref
texlive-tex-texinfo)))))
- (home-page "http://ess.r-project.org/")
+ (home-page "https://ess.r-project.org/")
(synopsis "Emacs mode for statistical analysis programs")
(description "Emacs Speaks Statistics (ESS) is an add-on package for GNU
Emacs. It is designed to support editing of scripts and interaction with
diff --git a/gnu/packages/emulators.scm b/gnu/packages/emulators.scm
index b4b585d51d..9e65d5f46b 100644
--- a/gnu/packages/emulators.scm
+++ b/gnu/packages/emulators.scm
@@ -1098,7 +1098,7 @@ emulation community. It provides highly accurate emulation.")
("sdl" ,sdl2)
("udev" ,eudev)
("vulkan-icd-loader" ,vulkan-icd-loader)
- ("wayland", wayland)
+ ("wayland" ,wayland)
("zlib" ,zlib)))
(native-inputs
`(("pkg-config" ,pkg-config)
diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm
index aee60bd697..c236d8cd67 100644
--- a/gnu/packages/engineering.scm
+++ b/gnu/packages/engineering.scm
@@ -699,12 +699,12 @@ language.")
(arguments
`(#:out-of-source? #t
#:tests? #f ; no tests
+ #:build-type "Release"
#:configure-flags
(list "-DKICAD_STABLE_VERSION=ON"
"-DKICAD_REPO_NAME=stable"
,(string-append "-DKICAD_BUILD_VERSION=4.0-"
(string-take commit 7))
- "-DCMAKE_BUILD_TYPE=Release"
"-DKICAD_SKIP_BOOST=ON"; Use our system's boost library.
"-DKICAD_SCRIPTING=ON"
"-DKICAD_SCRIPTING_MODULES=ON"
@@ -865,7 +865,7 @@ the 'showing the effect of'-style of operation.")
(inputs
`(("boost" ,boost)))
(native-inputs
- `(("python-2", python-2)
+ `(("python-2" ,python-2)
("python2-cheetah" ,python2-cheetah)))
(home-page "http://libvolk.org/")
(synopsis "Vector-Optimized Library of Kernels")
diff --git a/gnu/packages/enlightenment.scm b/gnu/packages/enlightenment.scm
index 653996538d..950a74f3c4 100644
--- a/gnu/packages/enlightenment.scm
+++ b/gnu/packages/enlightenment.scm
@@ -3,6 +3,7 @@
;;; Copyright © 2015 Daniel Pimentel <d4n1@member.fsf.org>
;;; Copyright © 2015, 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 ng0 <ng0@infotropique.org>
+;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -256,7 +257,7 @@ Libraries with some extra bells and whistles.")
(define-public enlightenment
(package
(name "enlightenment")
- (version "0.22.1")
+ (version "0.22.2")
(source (origin
(method url-fetch)
(uri
@@ -264,7 +265,7 @@ Libraries with some extra bells and whistles.")
name "/" name "-" version ".tar.xz"))
(sha256
(base32
- "1q57fz57d0b26z06m1wiq7c1sniwh885b0vs02mk4jgwva46nyr0"))))
+ "0b33w75s4w7xmz9cv8dyp8vy2gcffnrvjys20fhcpw26abw1wn2d"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--enable-mount-eeze")
diff --git a/gnu/packages/file-systems.scm b/gnu/packages/file-systems.scm
index 0e65213c72..6522662c4e 100644
--- a/gnu/packages/file-systems.scm
+++ b/gnu/packages/file-systems.scm
@@ -236,7 +236,7 @@ All of this is accomplished without a centralized metadata server.")
(inputs
`(("curl" ,curl)
("glib" ,glib)
- ("fuse", fuse)))
+ ("fuse" ,fuse)))
(native-inputs
`(("pkg-config" ,pkg-config)))
(home-page "http://curlftpfs.sourceforge.net/")
diff --git a/gnu/packages/flashing-tools.scm b/gnu/packages/flashing-tools.scm
index 192f84c36c..36c8353ee0 100644
--- a/gnu/packages/flashing-tools.scm
+++ b/gnu/packages/flashing-tools.scm
@@ -104,7 +104,7 @@ programmer devices.")
"1g4032c81wkk37wvbg1dxcqq6mnd76y9x7f2crmzqi6z4q9jcxmj"))))
(build-system gnu-build-system)
(inputs
- `(("libusb",libusb-0.1))) ; doesn't work with libusb-compat
+ `(("libusb" ,libusb-0.1))) ; doesn't work with libusb-compat
(arguments
'(#:phases
(modify-phases %standard-phases
@@ -300,8 +300,8 @@ RK3036, RK3066, RK312X, RK3168, RK3188, RK3288, RK3368.")
"1y7gwg3lipyp2zcysm2vid1qg5nwin9bxbvgzs28lz2rya4fz6sq"))))
(build-system cmake-build-system)
(arguments
- `(#:configure-flags '("-DCMAKE_BUILD_TYPE=Release")
- #:tests? #f; no tests
+ `(#:build-type "Release"
+ #:tests? #f ; no tests
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-invocations
diff --git a/gnu/packages/freedesktop.scm b/gnu/packages/freedesktop.scm
index 60a820cce1..1e2ad3b864 100644
--- a/gnu/packages/freedesktop.scm
+++ b/gnu/packages/freedesktop.scm
@@ -358,7 +358,7 @@ of a the system to know what users are logged in, and where.")
("glib:bin" ,glib "bin")))
(inputs
`(("glib" ,glib)
- ("bash-completion", bash-completion)
+ ("bash-completion" ,bash-completion)
("polkit" ,polkit)))
(propagated-inputs
`(("sqlite" ,sqlite)))
@@ -1135,7 +1135,7 @@ manually by a user.")
(define-public perl-file-basedir
(package
(name "perl-file-basedir")
- (version "0.07")
+ (version "0.08")
(source
(origin
(method url-fetch)
@@ -1143,7 +1143,7 @@ manually by a user.")
"File-BaseDir-" version ".tar.gz"))
(sha256
(base32
- "0aq8d4hsaxqibp36f773y6dfck7zd82v85sp8vhi6pjkg3pmf2hj"))))
+ "1qq5ag9zffx8zc5i9b4z03ar80pqj4drgk3vjdlyfapjwb9zqrf0"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)
diff --git a/gnu/packages/fvwm.scm b/gnu/packages/fvwm.scm
index 5ff3d5e4f2..a4c31aefc6 100644
--- a/gnu/packages/fvwm.scm
+++ b/gnu/packages/fvwm.scm
@@ -45,6 +45,27 @@
(base32
"0wzghjgy65pkn31rgl14fngizw7nbkzbxsfa670xmrndpmd4sr81"))))
(build-system gnu-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'install 'install-xsession
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (xsessions (string-append out "/share/xsessions")))
+ (mkdir-p xsessions)
+ (with-output-to-file
+ (string-append xsessions "/fvwm2.desktop")
+ (lambda _
+ (format #t
+ "[Desktop Entry]~@
+ Name=FVWM~@
+ Comment=FVWM~@
+ Exec=~a/bin/fvwm~@
+ TryExec=~@*~a/bin/fvwm~@
+ Icon=~@
+ Type=Application~%"
+ out))))
+ #t)))))
(native-inputs
`(("perl" ,perl)
("pkg-config" ,pkg-config)
diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm
index 543edbe94c..c4e55d3ae1 100644
--- a/gnu/packages/games.scm
+++ b/gnu/packages/games.scm
@@ -236,7 +236,7 @@ settings to tweak as well.")
("libvorbis" ,libvorbis)
("ncurses" ,ncurses)
("sdl2" ,sdl2)
- ("sdl2-image", sdl2-image)
+ ("sdl2-image" ,sdl2-image)
("sdl2-ttf" ,sdl2-ttf)
("sdl2-mixer" ,sdl2-mixer)))
(home-page "http://en.cataclysmdda.com/")
@@ -2240,19 +2240,19 @@ Transport Tycoon Deluxe.")
(substitute* "cmake_install.cmake"
(("EXPECTED_HASH SHA1=b587d83de508d0b104d14c599b76f8565900fce0")
"")))))))
- (inputs `(("curl", curl)
- ("fontconfig", fontconfig)
- ("freetype", freetype)
- ("jansson", jansson)
- ("libpng", libpng)
- ("libzip", libzip)
- ("mesa", mesa)
- ("openssl", openssl)
- ("sdl2", sdl2)
- ("speexdsp", speexdsp)
- ("zlib", zlib)))
+ (inputs `(("curl" ,curl)
+ ("fontconfig" ,fontconfig)
+ ("freetype" ,freetype)
+ ("jansson" ,jansson)
+ ("libpng" ,libpng)
+ ("libzip" ,libzip)
+ ("mesa" ,mesa)
+ ("openssl" ,openssl)
+ ("sdl2" ,sdl2)
+ ("speexdsp" ,speexdsp)
+ ("zlib" ,zlib)))
(native-inputs
- `(("pkg-config", pkg-config)))
+ `(("pkg-config" ,pkg-config)))
(home-page "https://github.com/OpenRCT2/OpenRCT2")
(synopsis "Free software re-implementation of RollerCoaster Tycoon 2")
(description "OpenRCT2 is a free software re-implementation of
diff --git a/gnu/packages/gimp.scm b/gnu/packages/gimp.scm
index c98f686d41..2483885c95 100644
--- a/gnu/packages/gimp.scm
+++ b/gnu/packages/gimp.scm
@@ -175,12 +175,12 @@ buffers.")
("libjpeg" ,libjpeg-8)
("atk" ,atk)
("gtk+" ,gtk+-2)
- ("exif" ,libexif) ;optional, EXIF + XMP support
- ("lcms" ,lcms) ;optional, color management
- ("librsvg" ,librsvg) ;optional, SVG support
- ("poppler", poppler) ; optional, PDF support
- ("python" ,python-2) ;optional, Python support
- ("python2-pygtk" ,python2-pygtk) ;optional, Python support
+ ("exif" ,libexif) ; optional, EXIF + XMP support
+ ("lcms" ,lcms) ; optional, color management
+ ("librsvg" ,librsvg) ; optional, SVG support
+ ("poppler" ,poppler) ; optional, PDF support
+ ("python" ,python-2) ; optional, Python support
+ ("python2-pygtk" ,python2-pygtk) ; optional, Python support
("gegl" ,gegl)))
(native-inputs
`(("pkg-config" ,pkg-config)
diff --git a/gnu/packages/gl.scm b/gnu/packages/gl.scm
index 74875738e6..45aeebceea 100644
--- a/gnu/packages/gl.scm
+++ b/gnu/packages/gl.scm
@@ -755,7 +755,7 @@ mixed vector/bitmap output.")
("libjpeg-turbo" ,libjpeg-turbo)
("mesa" ,mesa)
("openssl" ,openssl)))
- (native-inputs `(("pkg-config", pkg-config)))
+ (native-inputs `(("pkg-config" ,pkg-config)))
(home-page "https://www.virtualgl.org")
(synopsis "Redirects 3D commands from an OpenGL application onto a 3D
graphics card")
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index 6e8701f812..747b6f9315 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -273,7 +273,7 @@ features to enable users to create their discs easily and quickly.")
("gettext" ,gettext-minimal)
("itstool" ,itstool)
("intltool" ,intltool)
- ("cmake", cmake)))
+ ("cmake" ,cmake)))
(home-page "https://launchpad.net/deja-dup")
(synopsis "Simple backup tool, for regular encrypted backups")
(description
@@ -4422,7 +4422,7 @@ metadata in photo and video files of various formats.")
(define-public shotwell
(package
(name "shotwell")
- (version "0.27.4")
+ (version "0.28.0")
(source (origin
(method url-fetch)
(uri (string-append "mirror://gnome/sources/" name "/"
@@ -4430,7 +4430,7 @@ metadata in photo and video files of various formats.")
name "-" version ".tar.xz"))
(sha256
(base32
- "0g2vphhpxrljpy9sryfsgaayix807i1i9plj9bay72dk0zphqab2"))))
+ "1d797nmlz9gs6ri0h65b76s40ss6ma6h6405xqx03lhg5xni3kmg"))))
(build-system glib-or-gtk-build-system)
(propagated-inputs
`(("dconf" ,dconf)))
diff --git a/gnu/packages/gnuzilla.scm b/gnu/packages/gnuzilla.scm
index cac6f42918..627e42c816 100644
--- a/gnu/packages/gnuzilla.scm
+++ b/gnu/packages/gnuzilla.scm
@@ -449,7 +449,10 @@ security standards.")
(mozilla-patch "icecat-bug-1442127-pt2.patch" "da5792b70f30" "116k9qja5ir9b3laazasp43f5jx59qq72nknmq5bn5v1ixya9r4l")
(mozilla-patch "icecat-CVE-2018-5125-pt8.patch" "62b831df8269" "109pn0hqn7s27580glv4z7qv1pmjzii9szvf3wkn97k5wybrzgkx")
(mozilla-patch "icecat-bug-1442504.patch" "8954ce68a364" "0bl65zw82bwqg0mmcri94pxqq6ibff7y5rclkzapb081p6yvf73q")
- (mozilla-patch "icecat-CVE-2018-5125-pt9.patch" "8a16f439117c" "108iarql6z7h1r4rlzac6n6lrzs78x7kcdbfa0b5dbr5xc66jmgb")))
+ (mozilla-patch "icecat-CVE-2018-5125-pt9.patch" "8a16f439117c" "108iarql6z7h1r4rlzac6n6lrzs78x7kcdbfa0b5dbr5xc66jmgb")
+ (mozilla-patch "icecat-bug-1426603.patch" "ca0b92ecedee" "0dc3mdl4a3hrq4j384zjavf3splj6blv4masign710hk7svlgbhq")
+ (mozilla-patch "icecat-CVE-2018-5146.patch" "494e5d5278ba" "1yb4lxjw499ppwhk31vz0vzl0cfqvj9d4jwqag7ayj53ybwsqgjr")
+ (mozilla-patch "icecat-CVE-2018-5147.patch" "5cd5586a2f48" "10s774pwvj6xfk3kk6ivnhp2acc8x9sqq6na8z47nkhgwl2712i5")))
(modules '((guix build utils)))
(snippet
'(begin
diff --git a/gnu/packages/golang.scm b/gnu/packages/golang.scm
index 20a8c538be..e0ce1032f7 100644
--- a/gnu/packages/golang.scm
+++ b/gnu/packages/golang.scm
@@ -8,6 +8,7 @@
;;; Copyright © 2017 Sergei Trofimovich <slyfox@inbox.ru>
;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018 Christopher Baines <mail@cbaines.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -639,3 +640,54 @@ termination.")
per-goroutine.")
(home-page "https://github.com/jtolds/gls")
(license license:expat)))
+
+(define-public go-github-com-tj-docopt
+ (package
+ (name "go-github-com-tj-docopt")
+ (version "1.0.0")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/tj/docopt")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "06h8hdg1mh3s78zqlr01g4si7k0f0g6pr7fj7lnvfg446hgc7080"))))
+ (build-system go-build-system)
+ (arguments
+ '(#:import-path "github.com/tj/docopt"))
+ (synopsis "Go implementation of docopt")
+ (description
+ "This library allows the user to define a command-line interface from a
+program's help message rather than specifying it programatically with
+command-line parsers.")
+ (home-page "https://github.com/tj/docopt")
+ (license license:expat)))
+
+(define-public go-github-com-hashicorp-hcl
+ (let ((commit "23c074d0eceb2b8a5bfdbb271ab780cde70f05a8")
+ (revision "0"))
+ (package
+ (name "go-github-com-hashicorp-hcl")
+ (version (git-version "0.0.0" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/hashicorp/hcl")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0db4lpqb5m130rmfy3s3gjjf4dxllypmyrzxv6ggqhkmwmc7w4mc"))))
+ (build-system go-build-system)
+ (arguments
+ '(#:tests? #f
+ #:import-path "github.com/hashicorp/hcl"))
+ (synopsis "Go implementation of HashiCorp Configuration Language")
+ (description
+ "This package contains the main implementation of the @acronym{HCL,
+HashiCorp Configuration Language}. HCL is designed to be a language for
+expressing configuration which is easy for both humans and machines to read.")
+ (home-page "https://github.com/hashicorp/hcl")
+ (license license:mpl2.0))))
diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm
index 6a5e0e753f..38924e42b2 100644
--- a/gnu/packages/graph.scm
+++ b/gnu/packages/graph.scm
@@ -142,7 +142,7 @@ more.")
`(("r-igraph" ,r-igraph)
("r-matrix" ,r-matrix)
("r-scatterplot3d" ,r-scatterplot3d)))
- (home-page "http://www.r-project.org")
+ (home-page "https://www.r-project.org")
(synopsis "Diffusion map")
(description "This package implements the diffusion map method of data
parametrization, including creation and visualization of diffusion maps,
diff --git a/gnu/packages/graphics.scm b/gnu/packages/graphics.scm
index 61cd4ef5b4..58a6f7bc13 100644
--- a/gnu/packages/graphics.scm
+++ b/gnu/packages/graphics.scm
@@ -7,7 +7,7 @@
;;; Copyright © 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2017 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
-;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Mathieu Othacehe <m.othacehe@gmail.com>
;;;
;;; This file is part of GNU Guix.
@@ -424,25 +424,24 @@ visual effects work for film.")
(file-name (string-append name "-" version ".zip"))))
(build-system cmake-build-system)
(arguments
- `(#:tests? #f ;; No test target available.
+ `(#:tests? #f ; no test target available
+ ;; Without this flag, 'rd' will be added to the name of the
+ ;; library binaries and break linking with other programs.
+ #:build-type "Release"
#:configure-flags
(list (string-append "-DCMAKE_INSTALL_RPATH="
(assoc-ref %outputs "out") "/lib:"
- (assoc-ref %outputs "out") "/lib64")
- ;; We need to set this flag or otherwise 'rd' will be added
- ;; to the name of the library binaries and break linking
- ;; with other programs.
- "-DCMAKE_BUILD_TYPE=Release")))
+ (assoc-ref %outputs "out") "/lib64"))))
(native-inputs
`(("unzip" ,unzip)))
(inputs
- `(("giflib", giflib)
- ("jasper", jasper)
- ("librsvg", librsvg)
- ("pth", pth)
- ("qtbase", qtbase)
- ("ffmpeg", ffmpeg)
- ("mesa", mesa)))
+ `(("giflib" ,giflib)
+ ("jasper" ,jasper)
+ ("librsvg" ,librsvg)
+ ("pth" ,pth)
+ ("qtbase" ,qtbase)
+ ("ffmpeg" ,ffmpeg)
+ ("mesa" ,mesa)))
(synopsis "High performance real-time graphics toolkit")
(description
"The OpenSceneGraph is a high performance 3D graphics toolkit
diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm
index f6f8ef9b95..160c4c3ea9 100644
--- a/gnu/packages/guile.scm
+++ b/gnu/packages/guile.scm
@@ -665,18 +665,51 @@ library.")
(define-public mcron
(package
(name "mcron")
- (version "1.0.8")
+ (version "1.1")
(source (origin
- (method url-fetch)
- (uri (string-append "mirror://gnu/mcron/mcron-"
- version ".tar.gz"))
- (sha256
- (base32
- "0zparwgf01jgl1x53ik71ghabldq6zz18ha4dscps1i0qrzgap1b"))
- (patches (search-patches "mcron-install.patch"))))
+ (method url-fetch)
+ (uri (string-append "mirror://gnu/mcron/mcron-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "1f547sqqfbp0k02sqk4ivwx8y9mx8l0rrx1c9rrj033av073h6xq"))))
(build-system gnu-build-system)
- (native-inputs `(("pkg-config" ,pkg-config)))
- (inputs `(("ed" ,ed) ("which" ,which) ("guile" ,guile-2.0)))
+ (arguments
+ '(#:phases (modify-phases %standard-phases
+ (add-before 'check 'set-timezone
+ (lambda* (#:key inputs #:allow-other-keys)
+ ;; 'tests/schedule.sh' expects to be running in UTC+1.
+ (let ((tzdata (assoc-ref inputs "tzdata")))
+ (setenv "TZDIR"
+ (string-append tzdata
+ "/share/zoneinfo"))
+ (setenv "TZ" "UTC+1")
+ #t)))
+ (add-before 'check 'disable-schedule-test
+ (lambda _
+ ;; But! As it turns out, that test additionally relies
+ ;; on non-deterministic behavior; see
+ ;; <https://lists.gnu.org/archive/html/bug-mcron/2018-03/msg00001.html>.
+ (substitute* "tests/schedule.sh"
+ (("mkdir cron") "exit 77\n"))
+ #t))
+ (add-after 'install 'wrap-programs
+ (lambda* (#:key outputs #:allow-other-keys)
+ ;; By default mcron doesn't have its own modules in the
+ ;; search path, so the 'mcron' command fails to start.
+ (let* ((output (assoc-ref outputs "out"))
+ (modules (string-append output
+ "/share/guile/site/2.2"))
+ (go (string-append output
+ "/lib/guile/2.2/site-ccache")))
+ (wrap-program (string-append output "/bin/mcron")
+ `("GUILE_LOAD_PATH" ":" prefix
+ (,modules))
+ `("GUILE_LOAD_COMPILED_PATH" ":" prefix (,go)))
+ #t))))))
+ (native-inputs `(("pkg-config" ,pkg-config)
+ ("tzdata" ,tzdata-for-tests)))
+ (inputs `(("ed" ,ed) ("which" ,which) ("guile" ,guile-2.2)))
(home-page "https://www.gnu.org/software/mcron/")
(synopsis "Run jobs at scheduled times")
(description
@@ -687,64 +720,8 @@ format is also supported.")
(license license:gpl3+)))
(define-public mcron2
- ;; This is mthl's mcron development branch, not yet merged in mcron.
- (let ((commit "31baff1a5187d8ddc89324cbe42dbeffc309c962"))
- (package
- (inherit mcron)
- (name "mcron2")
- (version (string-append (package-version mcron) "-0."
- (string-take commit 7)))
- (source (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://notabug.org/mthl/mcron/")
- (commit commit)))
- (sha256
- (base32
- "1h5wxy997hxi718hpx419c23q09939kbxrjbbq54lv0cgw1bb63z"))
- (file-name (string-append name "-" version "-checkout"))))
- (native-inputs
- `(("autoconf" ,autoconf)
- ("automake" ,automake)
- ("pkg-config" ,pkg-config)
- ("texinfo" ,texinfo)
- ("help2man" ,help2man)))
- (inputs
- `(("guile-2.2" ,guile-2.2)
- ,@(srfi-1:alist-delete "guile" (package-inputs mcron))))
- (arguments
- `(#:modules ((ice-9 match) (ice-9 ftw)
- ,@%gnu-build-system-modules)
- ;; When building the targets in parallel, help2man tries to generate
- ;; the manpage from ./cron --help before it is built, which fails.
- #:parallel-build? #f
- #:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'use-guile-2.2
- (lambda _
- (substitute* "configure.ac"
- (("PKG_CHECK_MODULES\\(\\[GUILE\\],.*$")
- "PKG_CHECK_MODULES([GUILE], [guile-2.2])\n")
- (("guile/site/2.0")
- "guile/site/2.2"))
- #t))
- (add-after 'install 'wrap-mcron
- (lambda* (#:key outputs #:allow-other-keys)
- ;; Wrap the 'mcron' command to refer to the right
- ;; modules.
- (let* ((out (assoc-ref outputs "out"))
- (bin (string-append out "/bin"))
- (site (string-append
- out "/share/guile/site")))
- (match (scandir site)
- (("." ".." version)
- (let ((modules (string-append site "/" version)))
- (wrap-program (string-append bin "/mcron")
- `("GUILE_LOAD_PATH" ":" prefix
- (,modules))
- `("GUILE_LOAD_COMPILED_PATH" ":" prefix
- (,modules)))
- #t))))))))))))
+ ;; This was mthl's mcron development branch, and it became mcron 1.1.
+ (deprecated-package "mcron2" mcron))
(define-public guile-ics
(package
@@ -1974,8 +1951,8 @@ is not available for Guile 2.0.")
(license license:lgpl3+)))
(define-public guile-git
- (let ((revision "4")
- (commit "951a32c56cc4d80f8836e3c7394783e69c1fcbad"))
+ (let ((revision "5")
+ (commit "2bb9fbbf93cf93496718efc85ad9394aefa21029"))
(package
(name "guile-git")
(version (string-append "0.0-" revision "." (string-take commit 7)))
@@ -1985,7 +1962,7 @@ is not available for Guile 2.0.")
(uri (git-reference (url home-page) (commit commit)))
(sha256
(base32
- "0qri9x73ij6g40ijs4hyhj8knxw39ydgghiafq74dp99bc8hh0qc"))
+ "0z3v0v89dyp35zx2h2gsq6v29lba3wbzabc5n2g4hx2fcb6q5qqy"))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(arguments
diff --git a/gnu/packages/haskell.scm b/gnu/packages/haskell.scm
index d3869efba0..b5f73ba69b 100644
--- a/gnu/packages/haskell.scm
+++ b/gnu/packages/haskell.scm
@@ -6398,6 +6398,19 @@ and also has a mode for converting bibliographic databases a YAML format
suitable for inclusion in pandoc YAML metadata.")
(license license:bsd-3)))
+(define-public ghc-pandoc-citeproc-with-pandoc-1
+ (let ((for-pandoc-1
+ (package-input-rewriting
+ `((,ghc-aeson . ,ghc-aeson-for-pandoc-1)
+ (,ghc-yaml . ,ghc-yaml-for-pandoc-1)
+ (,ghc-texmath . ,ghc-texmath-for-pandoc-1)
+ (,ghc-pandoc-types . ,ghc-pandoc-types-for-pandoc-1)
+ (,ghc-hslua . ,ghc-hslua-for-pandoc-1)
+ (,ghc-skylighting . ,ghc-skylighting-for-pandoc-1)
+ (,ghc-doctemplates . ,ghc-doctemplates-for-pandoc-1)
+ (,ghc-pandoc . ,ghc-pandoc-1)))))
+ (for-pandoc-1 ghc-pandoc-citeproc)))
+
(define-public ghc-union-find
(package
(name "ghc-union-find")
@@ -7883,7 +7896,7 @@ files in Haskell.")
(inputs
`(("ghc-mtl" ,ghc-mtl)
("ghc-network" ,ghc-network)
- ("ghc-directory", ghc-directory)
+ ("ghc-directory" ,ghc-directory)
("ghc-old-locale" ,ghc-old-locale)))
(native-inputs
`(("ghc-hunit" ,ghc-hunit)))
@@ -8460,7 +8473,7 @@ that are much lighter weight than IO-threads.")
(native-inputs
`(("ghc-hunit" ,ghc-hunit)
("ghc-quickcheck" ,ghc-quickcheck)
- ("ghc-ieee754", ghc-ieee754)
+ ("ghc-ieee754" ,ghc-ieee754)
("ghc-test-framework" ,ghc-test-framework)
("ghc-test-framework-hunit" ,ghc-test-framework-hunit)
("ghc-test-framework-quickcheck2" ,ghc-test-framework-quickcheck2)))
@@ -8584,7 +8597,7 @@ statically known size.")
(build-system haskell-build-system)
(inputs `(("ghc-tuple-th" ,ghc-tuple-th)
("ghc-contravariant" ,ghc-contravariant)
- ("ghc-base-prelude",ghc-base-prelude)))
+ ("ghc-base-prelude" ,ghc-base-prelude)))
(home-page "https://github.com/nikita-volkov/contravariant-extras")
(synopsis "Extras for the @code{ghc-contravariant} Haskell package")
(description "This Haskell package provides extras for the
@@ -8899,7 +8912,7 @@ and are often as efficient as hand-written folds.")
("ghc-vector-algorithms" ,ghc-vector-algorithms)
("ghc-split" ,ghc-split)))
(native-inputs `(("ghc-hspec" ,ghc-hspec)
- ("ghc-hunit",ghc-hunit)
+ ("ghc-hunit" ,ghc-hunit)
("ghc-quickcheck" ,ghc-quickcheck)
("ghc-semigroups" ,ghc-semigroups)
("ghc-foldl" ,ghc-foldl)))
diff --git a/gnu/packages/image.scm b/gnu/packages/image.scm
index 12c4465253..2f9dd8b32a 100644
--- a/gnu/packages/image.scm
+++ b/gnu/packages/image.scm
@@ -626,7 +626,7 @@ compose, and analyze GIF images.")
(define-public imlib2
(package
(name "imlib2")
- (version "1.5.0")
+ (version "1.5.1")
(source (origin
(method url-fetch)
(uri (string-append
@@ -634,7 +634,7 @@ compose, and analyze GIF images.")
"/imlib2-" version ".tar.bz2"))
(sha256
(base32
- "0kg28b5wp886hiy12v7abdybrvlymb7g3nvg0ysn2y8h883s5w8m"))))
+ "1bms2iwmvnvpz5jqq3r52glarqkafif47zbh1ykz8hw85d2mfkps"))))
(build-system gnu-build-system)
(native-inputs
`(("pkgconfig" ,pkg-config)))
diff --git a/gnu/packages/imagemagick.scm b/gnu/packages/imagemagick.scm
index d798833742..d3cc656f11 100644
--- a/gnu/packages/imagemagick.scm
+++ b/gnu/packages/imagemagick.scm
@@ -47,14 +47,14 @@
;; The 7 release series has an incompatible API, while the 6 series is still
;; maintained. Don't update to 7 until we've made sure that the ImageMagick
;; users are ready for the 7-series API.
- (version "6.9.9-37")
+ (version "6.9.9-39")
(source (origin
(method url-fetch)
(uri (string-append "mirror://imagemagick/ImageMagick-"
version ".tar.xz"))
(sha256
(base32
- "1hmfw0jcpc3s3gz9zrzjy9amyrfz6gzzjdsyaw3xw994aq9qf4lq"))))
+ "0cgrvfg8722cdv2y0hw2f7xhzdfmfiqc1348l71ki38dg4b0q4sn"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--with-frozenpaths" "--without-gcc-arch")
diff --git a/gnu/packages/irc.scm b/gnu/packages/irc.scm
index e349b1cb6b..d13cb35365 100644
--- a/gnu/packages/irc.scm
+++ b/gnu/packages/irc.scm
@@ -101,7 +101,7 @@
("qttools" ,qttools)))
(inputs
`(("qca" ,qca)
- ("qtbase", qtbase)
+ ("qtbase" ,qtbase)
("qtscript" ,qtscript)
("snorenotify" ,snorenotify)
("zlib" ,zlib)))
@@ -156,14 +156,14 @@ SILC and ICB protocols via plugins.")
(define-public weechat
(package
(name "weechat")
- (version "2.0.1")
+ (version "2.1")
(source (origin
(method url-fetch)
(uri (string-append "https://weechat.org/files/src/weechat-"
version ".tar.xz"))
(sha256
(base32
- "1l854dramvn9vfba7jpazkjwm4k4i5pshq58vjv6z2mxmcp5hhv9"))
+ "0f7d2vdbxc5kgjl7lkamnbxvidgxwa8f9j3nr9fd4gr4z0gzi86d"))
(patches (search-patches "weechat-python.patch"))))
(build-system cmake-build-system)
(native-inputs
diff --git a/gnu/packages/kde-frameworks.scm b/gnu/packages/kde-frameworks.scm
index 246860e3f3..b763a03476 100644
--- a/gnu/packages/kde-frameworks.scm
+++ b/gnu/packages/kde-frameworks.scm
@@ -157,7 +157,7 @@ common build settings used in software produced by the KDE community.")
;; TODO: Add building the super experimental QML support
`(("extra-cmake-modules" ,extra-cmake-modules)
("pkg-config" ,pkg-config)
- ("qttools", qttools)))
+ ("qttools" ,qttools)))
(inputs
`(("qtbase" ,qtbase)))
(arguments
@@ -1186,7 +1186,7 @@ lower level classes for interaction with the X Windowing System.")
("pkg-config" ,pkg-config)))
(propagated-inputs
;; Headers contain #include <ModemManager/ModemManager.h>
- `(("modem-manager", modem-manager)))
+ `(("modem-manager" ,modem-manager)))
(inputs
`(("qtbase" ,qtbase)))
(arguments
@@ -1284,7 +1284,7 @@ which are used in DBus communication.")
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
- `(("libdmtx", libdmtx)
+ `(("libdmtx" ,libdmtx)
("qrencode" ,qrencode)
("qtbase" ,qtbase))) ;; TODO: rethink: nix propagates this
(home-page "https://api.kde.org/frameworks/prison/html/index.html")
@@ -2209,7 +2209,7 @@ their settings.")
("kwidgetsaddons" ,kwidgetsaddons)
("kwindowsystem" ,kwindowsystem)
("kxmlgui" ,kxmlgui)
- ("libepoxy", libepoxy)
+ ("libepoxy" ,libepoxy)
("qtbase" ,qtbase)
("qtdeclarative" ,qtdeclarative)
("solid" ,solid)))
@@ -3003,7 +3003,7 @@ types or handled by application specific code.")
("libgit2" ,libgit2)
("perl" ,perl)
("qtbase" ,qtbase)
- ("qtdeclarative", qtdeclarative)
+ ("qtdeclarative" ,qtdeclarative)
("qtscript" ,qtscript)
("qtxmlpatterns" ,qtxmlpatterns)
("solid" ,solid)
@@ -3071,7 +3071,7 @@ library.")
("kwidgetsaddons" ,kwidgetsaddons)
("kwindowsystem" ,kwindowsystem)
("qtbase" ,qtbase)
- ("qtspeech", qtspeech)))
+ ("qtspeech" ,qtspeech)))
(arguments
`(#:phases
(modify-phases %standard-phases
@@ -3150,7 +3150,7 @@ the passwords on KDE work spaces.")
`(("extra-cmake-modules" ,extra-cmake-modules)))
(inputs
`(("attica" ,attica)
- ("kauth", kauth)
+ ("kauth" ,kauth)
("kcodecs" ,kcodecs)
("kcoreaddons" ,kcoreaddons)
("kglobalaccel" ,kglobalaccel)
@@ -3395,7 +3395,7 @@ workspace.")
`(("dbus" ,dbus)
("docbook-xml" ,docbook-xml-4.4) ; optional
("extra-cmake-modules" ,extra-cmake-modules)
- ("perl", perl)
+ ("perl" ,perl)
("perl-uri" ,perl-uri)
("pkg-config" ,pkg-config)
("shared-mime-info" ,shared-mime-info)
@@ -3421,7 +3421,7 @@ workspace.")
("knotifications" ,knotifications)
("kparts" ,kparts)
("ktextwidgets" ,ktextwidgets)
- ("kunitconversion", kunitconversion)
+ ("kunitconversion" ,kunitconversion)
("kwindowsystem" ,kwindowsystem)
("qtbase" ,qtbase)))
(inputs
@@ -3434,9 +3434,9 @@ workspace.")
("kservice" ,kservice)
("kwidgetsaddons" ,kwidgetsaddons)
("kxmlgui" ,kxmlgui)
- ("libsm", libsm)
- ("networkmanager-qt", networkmanager-qt)
- ("openssl", openssl)
+ ("libsm" ,libsm)
+ ("networkmanager-qt" ,networkmanager-qt)
+ ("openssl" ,openssl)
("qtsvg" ,qtsvg)
("qttools" ,qttools)
("qtx11extras" ,qtx11extras)))
@@ -3507,7 +3507,7 @@ http://community.kde.org/Frameworks/Porting_Notes should help with this.")
(build-system cmake-build-system)
(native-inputs
`(("extra-cmake-modules" ,extra-cmake-modules)
- ("perl", perl)))
+ ("perl" ,perl)))
(inputs
`(("giflib" ,giflib)
("gperf" ,gperf)
@@ -3521,14 +3521,14 @@ http://community.kde.org/Frameworks/Porting_Notes should help with this.")
("knotifications" ,knotifications)
("kparts" ,kparts)
("ktextwidgets" ,ktextwidgets)
- ("kwallet", kwallet)
+ ("kwallet" ,kwallet)
("kwidgetsaddons" ,kwidgetsaddons)
("kwindowsystem" ,kwindowsystem)
("kxmlgui" ,kxmlgui)
- ("libjpeg", libjpeg)
- ("libpng", libpng)
- ("openssl", openssl)
- ("phonon", phonon)
+ ("libjpeg" ,libjpeg)
+ ("libpng" ,libpng)
+ ("openssl" ,openssl)
+ ("phonon" ,phonon)
("qtbase" ,qtbase)
("qtx11extras" ,qtx11extras)
("sonnet" ,sonnet)))
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index 6f450572c0..0c16f569da 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -383,8 +383,8 @@ It has been modified to remove all non-free binary blobs.")
;; supports qemu "virt" machine and possibly a large number of ARM boards.
;; See : https://wiki.debian.org/DebianKernel/ARMMP.
-(define %linux-libre-version "4.15.10")
-(define %linux-libre-hash "10fp8jmy0fxq8l01m1nnagpq1hznl9jmhcwknk8izjmdcb5snq6c")
+(define %linux-libre-version "4.15.11")
+(define %linux-libre-hash "0nrsmw7x5nsc3906dfvfakkibv8pv09r1sf5ckzbkcbkwpyq62h8")
(define-public linux-libre
(make-linux-libre %linux-libre-version
@@ -392,8 +392,8 @@ It has been modified to remove all non-free binary blobs.")
%linux-compatible-systems
#:configuration-file kernel-config))
-(define %linux-libre-4.14-version "4.14.27")
-(define %linux-libre-4.14-hash "0mgkka9niyd0lj4qliy4v7jjh9lg1a5jwlv60yw7z0s4k7ajyyrp")
+(define %linux-libre-4.14-version "4.14.28")
+(define %linux-libre-4.14-hash "0xg3zsm1yjsvxir8sz7zliz8gcc8d45xh23qyiszl75cfqjl36l3")
(define-public linux-libre-4.14
(make-linux-libre %linux-libre-4.14-version
@@ -402,14 +402,14 @@ It has been modified to remove all non-free binary blobs.")
#:configuration-file kernel-config))
(define-public linux-libre-4.9
- (make-linux-libre "4.9.87"
- "1p8phvmxp04npzqzqcfmv8k9l5l65s7vpjcakdm0fxfkzvnswsp6"
+ (make-linux-libre "4.9.88"
+ "0qlhd8xw3g00i7krpfndkwxzjszk067h26qsxxsszvxyx2s6gp4x"
%intel-compatible-systems
#:configuration-file kernel-config))
(define-public linux-libre-4.4
- (make-linux-libre "4.4.121"
- "1d7djrhiib0ds9ssjkali6b5w6rzap4zgj5hf9jq1jmqpp54jkm4"
+ (make-linux-libre "4.4.122"
+ "1ayilv7474vsif3jpb723jbcy4kymv1fpdr96c1g743bad1wkqqq"
%intel-compatible-systems
#:configuration-file kernel-config))
@@ -1776,9 +1776,9 @@ file system is as easy as logging into the server with an SSH client.")
(base32
"0v4si1ri6lhnq9q87gkx7fsh6lv6xz4bynknwndqncpvfp5cy1jg"))))
(build-system gnu-build-system)
- (inputs `(("fuse", fuse)
- ("libarchive", libarchive)))
- (native-inputs `(("pkg-config", pkg-config)))
+ (inputs `(("fuse" ,fuse)
+ ("libarchive" ,libarchive)))
+ (native-inputs `(("pkg-config" ,pkg-config)))
(home-page "http://www.cybernoia.de/software/archivemount")
(synopsis "Tool for mounting archive files with FUSE")
(description "archivemount is a FUSE-based file system for Unix variants,
@@ -2033,7 +2033,7 @@ from the module-init-tools project.")
("docbook-xml" ,docbook-xml-4.2)
("docbook-xsl" ,docbook-xsl)
("libxml2" ,libxml2) ;for $XML_CATALOG_FILES
- ("xsltproc", libxslt)))
+ ("xsltproc" ,libxslt)))
(inputs
;; When linked against libblkid, eudev can populate /dev/disk/by-label
;; and similar; it also installs the '60-persistent-storage.rules' file,
@@ -2542,14 +2542,14 @@ thanks to the use of namespaces.")
(define-public hdparm
(package
(name "hdparm")
- (version "9.54")
+ (version "9.55")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/" name "/" name "/"
name "-" version ".tar.gz"))
(sha256
(base32
- "0ghnhdj7wfw6acfyhdawpfa5n9kvkvzgi1fw6i7sghgbjx5nhyjd"))))
+ "1ivdvrzimaayiq03by8mcq0mhmdljndj06h012zkdpw34irnpixm"))))
(build-system gnu-build-system)
(arguments
`(#:make-flags (let ((out (assoc-ref %outputs "out")))
@@ -3403,8 +3403,8 @@ The package provides additional NTFS tools.")
;; Upstream uses the "ninja" build system and encourage distros
;; to do the same for consistency. They also recommend using the
;; "Release" build type.
- #:configure-flags (list "-GNinja"
- "-DCMAKE_BUILD_TYPE=Release")
+ #:build-type "Release"
+ #:configure-flags (list "-GNinja")
#:phases
(modify-phases %standard-phases
(replace 'build
@@ -3704,7 +3704,7 @@ are exceeded.")
(inputs
`(("acl" ,acl)
("libuuid" ,util-linux)
- ("lzo", lzo)
+ ("lzo" ,lzo)
("zlib" ,zlib)))
(build-system gnu-build-system)
(arguments
@@ -4134,13 +4134,13 @@ used by nftables.")
(base32
"1i1gfy8l7qyhc5vlrpp63s0n5kybmc9pi4dywiq8rmkhrrnddsla"))))
(build-system gnu-build-system)
- (inputs `(("bison", bison)
- ("flex", flex)
- ("gmp", gmp)
- ("libmnl", libmnl)
- ("libnftnl", libnftnl)
- ("readline", readline)))
- (native-inputs `(("pkg-config", pkg-config)))
+ (inputs `(("bison" ,bison)
+ ("flex" ,flex)
+ ("gmp" ,gmp)
+ ("libmnl" ,libmnl)
+ ("libnftnl" ,libnftnl)
+ ("readline" ,readline)))
+ (native-inputs `(("pkg-config" ,pkg-config)))
(home-page "http://www.nftables.org")
(synopsis "Userspace utility for Linux packet filtering")
(description "nftables is the project that aims to replace the existing
diff --git a/gnu/packages/lua.scm b/gnu/packages/lua.scm
index 0d4bf12817..69180abeac 100644
--- a/gnu/packages/lua.scm
+++ b/gnu/packages/lua.scm
@@ -354,12 +354,12 @@ secure session between the peers.")
(inputs
`(("gobject-introspection" ,gobject-introspection)
("glib" ,glib)
- ("pango", pango)
- ("gtk", gtk+-2)
+ ("pango" ,pango)
+ ("gtk" ,gtk+-2)
("lua" ,lua)
("cairo" ,cairo)
("libffi" ,libffi)
- ("xorg-server", xorg-server)))
+ ("xorg-server" ,xorg-server)))
(native-inputs
`(("pkg-config" ,pkg-config)
("dbus" ,dbus))) ;tests use 'dbus-run-session'
@@ -397,7 +397,7 @@ Notable examples are GTK+, GStreamer and Webkit.")
(string-append out "/share/lua/" lua-version))
#t))))
#:test-target "test"))
- (inputs `(("lua", lua)))
+ (inputs `(("lua" ,lua)))
(synopsis "Pattern-matching library for Lua")
(description
"LPeg is a pattern-matching library for Lua, based on Parsing Expression
@@ -436,7 +436,7 @@ Grammars (PEGs).")
#:phases
(modify-phases %standard-phases
(delete 'configure))))
- (inputs `(("lua", lua)))
+ (inputs `(("lua" ,lua)))
(home-page "https://bitop.luajit.org/index.html")
(synopsis "Bitwise operations on numbers for Lua")
(description
diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm
index b579914e73..7557f1365f 100644
--- a/gnu/packages/mail.scm
+++ b/gnu/packages/mail.scm
@@ -1814,7 +1814,7 @@ in Perl.")
(patch-shebang "mb2md" (list (string-append perl "/bin")))
(chmod "mb2md" #o555))
#t))))
- (native-inputs `(("gzip", gzip)))
+ (native-inputs `(("gzip" ,gzip)))
(inputs `(("perl" ,perl)
("perl-timedate" ,perl-timedate)))
(home-page "http://batleth.sapienti-sat.org/projects/mb2md/")
diff --git a/gnu/packages/make-bootstrap.scm b/gnu/packages/make-bootstrap.scm
index 543aa919c3..a57491aeb4 100644
--- a/gnu/packages/make-bootstrap.scm
+++ b/gnu/packages/make-bootstrap.scm
@@ -110,7 +110,7 @@ for `sh' in $PATH, and without nscd, and with static NSS modules."
("gcc" ,(package (inherit gcc)
(outputs '("out")) ; all in one so libgcc_s is easily found
(inputs
- `(("libc",(glibc-for-bootstrap))
+ `(("libc" ,(glibc-for-bootstrap))
("libc:static" ,(glibc-for-bootstrap) "static")
,@(package-inputs gcc)))))
,@(fold alist-delete (%final-inputs) '("libc" "gcc")))))
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 5e7d7b2bd3..beafc22750 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -53,6 +53,7 @@
#:use-module (guix build-system gnu)
#:use-module (guix build-system ocaml)
#:use-module (guix build-system r)
+ #:use-module (guix build-system ruby)
#:use-module (gnu packages algebra)
#:use-module (gnu packages autotools)
#:use-module (gnu packages bison)
@@ -97,6 +98,7 @@
#:use-module (gnu packages python-web)
#:use-module (gnu packages qt)
#:use-module (gnu packages readline)
+ #:use-module (gnu packages ruby)
#:use-module (gnu packages tbb)
#:use-module (gnu packages scheme)
#:use-module (gnu packages shells)
@@ -1947,6 +1949,38 @@ special functions. It uses Matlab function names where appropriate to simplify
porting.")
(license license:gpl3+)))
+(define-public ruby-asciimath
+ (package
+ (name "ruby-asciimath")
+ (version "1.0.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "asciimath" version))
+ (sha256
+ (base32
+ "1d80kiph5mc78zps7si1hv48kv4k12mzaq8jk5kb3pqpjdr72qmc"))))
+ (build-system ruby-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ ;; Apply this patch
+ ;; https://github.com/asciidoctor/asciimath/commit/1c06fdc8086077f4785479f78b0823a4a72d7948
+ (add-after 'unpack 'patch-remove-spurious-backslashes
+ (lambda _
+ (substitute* "spec/parser_spec.rb"
+ (("\\\\\"")
+ "\"")))))))
+ (native-inputs
+ `(("bundler" ,bundler)
+ ("ruby-rspec" ,ruby-rspec)))
+ (synopsis "AsciiMath parsing and conversion library")
+ (description
+ "A pure Ruby AsciiMath parsing and conversion library. AsciiMath is an
+easy-to-write markup language for mathematics.")
+ (home-page "https://github.com/asciidoctor/asciimath")
+ (license license:expat)))
+
(define-public superlu
(package
(name "superlu")
diff --git a/gnu/packages/messaging.scm b/gnu/packages/messaging.scm
index 6df889e315..6fe7ff434a 100644
--- a/gnu/packages/messaging.scm
+++ b/gnu/packages/messaging.scm
@@ -144,9 +144,9 @@ keys, no previous conversation is compromised.")
#:configure-flags '("-DBUILD_SHARED_LIBS=on" "-DBUILD_TESTING=1")))
(build-system cmake-build-system)
(inputs `( ;; Required for tests:
- ("check", check)
- ("openssl", openssl)))
- (native-inputs `(("pkg-config", pkg-config)))
+ ("check" ,check)
+ ("openssl" ,openssl)))
+ (native-inputs `(("pkg-config" ,pkg-config)))
(home-page "https://github.com/WhisperSystems/libsignal-protocol-c")
(synopsis "Implementation of a ratcheting forward secrecy protocol")
(description "libsignal-protocol-c is an implementation of a ratcheting
@@ -614,8 +614,8 @@ end-to-end encryption support; XML console.")
(assoc-ref glib-or-gtk:%standard-phases 'glib-or-gtk-wrap)))))
(inputs
`(("libgee" ,libgee)
- ("libsignal-protocol-c", libsignal-protocol-c)
- ("libgcrypt", libgcrypt)
+ ("libsignal-protocol-c" ,libsignal-protocol-c)
+ ("libgcrypt" ,libgcrypt)
("libsoup" ,libsoup)
("sqlite" ,sqlite)
("gpgme" ,gpgme)
@@ -624,7 +624,7 @@ end-to-end encryption support; XML console.")
("gsettings-desktop-schemas" ,gsettings-desktop-schemas)))
(native-inputs
`(("pkg-config" ,pkg-config)
- ("libsignal-protocol-c-source", (package-source libsignal-protocol-c))
+ ("libsignal-protocol-c-source" ,(package-source libsignal-protocol-c))
("glib" ,glib "bin")
("vala" ,vala)
("gettext" ,gettext-minimal)))
diff --git a/gnu/packages/monitoring.scm b/gnu/packages/monitoring.scm
index fee9575bb9..bbfa4957fc 100644
--- a/gnu/packages/monitoring.scm
+++ b/gnu/packages/monitoring.scm
@@ -28,6 +28,7 @@
#:use-module (guix build-system gnu)
#:use-module (gnu packages admin)
#:use-module (gnu packages base)
+ #:use-module (gnu packages check)
#:use-module (gnu packages compression)
#:use-module (gnu packages django)
#:use-module (gnu packages gd)
@@ -264,3 +265,33 @@ and persisting them to disk using the Whisper time-series library.")
two things: store numeric time-series data, and render graphs of this data on
demand.")
(license license:asl2.0)))
+
+(define-public python-prometheus-client
+ (package
+ (name "python-prometheus-client")
+ (version "0.1.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "prometheus_client" version))
+ (sha256
+ (base32
+ "164qzzg8q8awqk0angcm87p2sjiibaj1wgjz0xk6j0klvqi5q2mz"))))
+ (build-system python-build-system)
+ (arguments
+ '(;; No included tests.
+ #:tests? #f))
+ (home-page
+ "https://github.com/prometheus/client_python")
+ (synopsis "Python client for the Prometheus monitoring system")
+ (description
+ "The @code{prometheus_client} package supports exposing metrics from
+software written in Python, so that they can be scraped by a Prometheus
+service.
+
+Metrics can be exposed through a standalone web server, or through Twisted,
+WSGI and the node exporter textfile collector.")
+ (license license:asl2.0)))
+
+(define-public python2-prometheus-client
+ (package-with-python2 python-prometheus-client))
diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm
index 7eb2896963..0899999576 100644
--- a/gnu/packages/music.scm
+++ b/gnu/packages/music.scm
@@ -401,7 +401,7 @@ many input formats and provides a customisable Vi-style user interface.")
"Clarinet in Bb.denemo"))
#t)))))
(native-inputs
- `(("glib:bin", glib "bin") ; for gtester
+ `(("glib:bin" ,glib "bin") ; for gtester
("pkg-config" ,pkg-config)))
(inputs
`(("alsa-lib" ,alsa-lib)
@@ -419,7 +419,7 @@ many input formats and provides a customisable Vi-style user interface.")
("libsndfile" ,libsndfile)
("libtool" ,libtool)
("libxml2" ,libxml2)
- ("lilypond", lilypond)
+ ("lilypond" ,lilypond)
("portaudio" ,portaudio)
("portmidi" ,portmidi)
("rubberband" ,rubberband)))
@@ -1756,10 +1756,10 @@ projects.")
(patches (list (search-patch "portmidi-modular-build.patch")))))
(build-system cmake-build-system)
(arguments
- `(#:tests? #f ; tests cannot be linked
+ `(#:tests? #f ; tests cannot be linked
+ #:build-type "Release" ; needed to have PMALSA set
#:configure-flags
(list "-DPORTMIDI_ENABLE_JAVA=Off"
- "-DCMAKE_BUILD_TYPE=Release" ; needed to have PMALSA set
"-DPORTMIDI_ENABLE_TEST=Off"))) ; tests fail linking
(inputs
`(("alsa-lib" ,alsa-lib)))
@@ -2520,7 +2520,7 @@ websites such as Libre.fm.")
(build-system python-build-system)
(propagated-inputs
`(("python-requests" ,python-requests)
- ("eyed3", eyed3)
+ ("eyed3" ,eyed3)
("python-beautifulsoup4" ,python-beautifulsoup4)
("youtube-dl" ,youtube-dl)))
(arguments
diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm
index c962a8d821..fa2ff1057e 100644
--- a/gnu/packages/networking.scm
+++ b/gnu/packages/networking.scm
@@ -1227,11 +1227,11 @@ gone wild and are suddenly taking up your bandwidth.")
(assoc-ref %build-inputs "ncurses") "/lib")
(string-append "--with-tlslib=GnuTLS"))))
(build-system gnu-build-system)
- (inputs `(("gnutls", gnutls)
- ("libxml2", libxml2)
- ("ncurses", ncurses)
- ("zlib", zlib)))
- (native-inputs `(("pkg-config", pkg-config)))
+ (inputs `(("gnutls" ,gnutls)
+ ("libxml2" ,libxml2)
+ ("ncurses" ,ncurses)
+ ("zlib" ,zlib)))
+ (native-inputs `(("pkg-config" ,pkg-config)))
(home-page "https://github.com/nzbget/nzbget")
(synopsis "Usenet binary file downloader")
(description
@@ -1457,11 +1457,11 @@ does not use SSH and requires a pre-shared symmetric key.")
(patches
(search-patches "quagga-reproducible-build.patch"))))
(build-system gnu-build-system)
- (native-inputs `(("pkg-config",pkg-config)
- ("perl",perl)
- ("dejagnu",dejagnu)))
- (inputs `(("readline",readline)
- ("c-ares",c-ares)))
+ (native-inputs `(("pkg-config" ,pkg-config)
+ ("perl" ,perl)
+ ("dejagnu" ,dejagnu)))
+ (inputs `(("readline" ,readline)
+ ("c-ares" ,c-ares)))
(synopsis "Routing Software Suite")
(description "Quagga is a routing software suite, providing implementations
of OSPFv2, OSPFv3, RIP v1 and v2, RIPng and BGP-4 for Unix platforms.
diff --git a/gnu/packages/ocaml.scm b/gnu/packages/ocaml.scm
index 25ef8ccad0..5f67aa62aa 100644
--- a/gnu/packages/ocaml.scm
+++ b/gnu/packages/ocaml.scm
@@ -3759,7 +3759,7 @@ sensitive completion, colors, and more.")
(delete 'configure))))
(inputs
`(("topkg" ,ocaml-topkg)
- ("opam", opam)))
+ ("opam" ,opam)))
(synopsis "Various signed and unsigned integer types for OCaml")
(description "The ocaml-integers library provides a number of 8-, 16-, 32-
and 64-bit signed and unsigned integer types, together with aliases such as
@@ -3793,7 +3793,7 @@ long and size_t whose sizes depend on the host platform.")
("integers" ,ocaml-integers)
("lwt" ,ocaml-lwt)
("topkg" ,ocaml-topkg)
- ("opam", opam)))
+ ("opam" ,opam)))
(synopsis "Library for binding to C libraries using pure OCaml")
(description "Ctypes is a library for binding to C libraries using pure
OCaml. The primary aim is to make writing C extensions as straightforward as
@@ -3826,7 +3826,7 @@ without writing or generating any C!")
(delete 'configure))))
(inputs
`(("topkg" ,ocaml-topkg)
- ("opam", opam)))
+ ("opam" ,opam)))
(native-inputs
`(("astring" ,ocaml-astring)))
(synopsis "OCamlbuild plugin for C stubs")
diff --git a/gnu/packages/onc-rpc.scm b/gnu/packages/onc-rpc.scm
index 72f2dd6409..64887212d3 100644
--- a/gnu/packages/onc-rpc.scm
+++ b/gnu/packages/onc-rpc.scm
@@ -33,16 +33,15 @@
(define-public libtirpc
(package
(name "libtirpc")
- (version "1.0.2")
+ (version "1.0.3")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/libtirpc/libtirpc/"
version "/libtirpc-"
version ".tar.bz2"))
- (patches (search-patches "libtirpc-missing-headers.patch"))
(sha256
(base32
- "1xchbxy0xql7yl7z4n1icj8r7dmly46i22fvm00vdjq64zlmqg3j"))))
+ "0ppxl3k3nsz0qdakq844i2kj4fvh9h937lhx26bgmpmxq67sghw6"))))
(build-system gnu-build-system)
(arguments
`(#:phases
@@ -59,7 +58,8 @@
;; Remove the dangling symlinks since it breaks the
;; 'patch-source-shebangs' file tree traversal.
- (delete-file "INSTALL"))))))
+ (delete-file "INSTALL")
+ #t)))))
(inputs `(("mit-krb5" ,mit-krb5)))
(home-page "https://sourceforge.net/projects/libtirpc/")
(synopsis "Transport-independent Sun/ONC RPC implementation")
diff --git a/gnu/packages/openstack.scm b/gnu/packages/openstack.scm
index f0147bab59..5875562aa1 100644
--- a/gnu/packages/openstack.scm
+++ b/gnu/packages/openstack.scm
@@ -452,14 +452,14 @@ pipeline and used by various modules such as logging.")
(define-public python-oslo.i18n
(package
(name "python-oslo.i18n")
- (version "3.19.0")
+ (version "3.20.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "oslo.i18n" version))
(sha256
(base32
- "18lbfq55cqrbmwm5p6vci9mkjfzr0zwz54ax3ysa463wba5m84cp"))))
+ "0kjcdw4bk3mi4vqmqwhhq053kxbbbj05si6nwxd1pzx33z067ky3"))))
(build-system python-build-system)
(propagated-inputs
`(("python-babel" ,python-babel)
@@ -646,14 +646,14 @@ from the OpenStack project.")
(define-public python-oslotest
(package
(name "python-oslotest")
- (version "3.2.0")
+ (version "3.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "oslotest" version))
(sha256
(base32
- "1xay6wjxzqm4bg87fahqas84dhvhgf1gghzldkcczsfx897mqdkh"))))
+ "006i73w8kbc9s0av2v5mbni6mnkb91c2nq17wa0lz7bwk5zss992"))))
(build-system python-build-system)
(propagated-inputs
`(("python-fixtures" ,python-fixtures)
@@ -680,14 +680,14 @@ and better support for mocking results.")
(define-public python-oslo.utils
(package
(name "python-oslo.utils")
- (version "3.35.0")
+ (version "3.36.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "oslo.utils" version))
(sha256
(base32
- "1ai9yyasyh1563khsri6ryk6iqdprmyiashg377m9h4nmv700ybx"))))
+ "0zvm31qdvqywxppqdjwbxxsqaga3dg4slpvbbmqqm9ig4n78mhay"))))
(build-system python-build-system)
(propagated-inputs
`(("python-debtcollector" ,python-debtcollector)
diff --git a/gnu/packages/password-utils.scm b/gnu/packages/password-utils.scm
index 46b6e795ab..8810392530 100644
--- a/gnu/packages/password-utils.scm
+++ b/gnu/packages/password-utils.scm
@@ -458,14 +458,14 @@ winner of the 2015 Password Hashing Competition.")
(define-public python-bcrypt
(package
(name "python-bcrypt")
- (version "3.1.0")
+ (version "3.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bcrypt" version))
(sha256
(base32
- "1giy0dvd8gvq6flxh44np1v2nqwsji5qsnrz038mgwzgp7c20j75"))))
+ "13cyrnqwkhc70rs6dg65z4yrrr3dc42fhk11804fqmci9hvimvb7"))))
(build-system python-build-system)
(native-inputs
`(("python-pycparser" ,python-pycparser)
diff --git a/gnu/packages/patches/bash-completion-directories.patch b/gnu/packages/patches/bash-completion-directories.patch
index 351a8e02fb..164096f16c 100644
--- a/gnu/packages/patches/bash-completion-directories.patch
+++ b/gnu/packages/patches/bash-completion-directories.patch
@@ -8,9 +8,9 @@ directory, but also in the user's profile and in the system profile.
This is what this patch does.
---- a/bash_completion 2016-08-03 10:23:02.356782287 +0200
-+++ b/bash_completion 2016-08-03 10:27:50.120140403 +0200
-@@ -1960,7 +1960,13 @@
+--- a/bash_completion
++++ b/bash_completion
+@@ -2016,7 +2016,13 @@ complete -F _minimal ''
__load_completion()
{
@@ -22,6 +22,6 @@ This is what this patch does.
+ "/run/current-system/profile/etc/bash_completion.d/$base"
+ ${BASH_COMPLETION_USER_DIR:-${XDG_DATA_HOME:-$HOME/.local/share}/bash-completion}/completions )
+
- local OIFS=$IFS IFS=: dir cmd="$1" compfile
+ local OIFS=$IFS IFS=: dir cmd="${1##*/}" compfile
for dir in ${XDG_DATA_DIRS:-/usr/local/share:/usr/share}; do
dirs+=( $dir/bash-completion/completions )
diff --git a/gnu/packages/patches/java-simple-xml-fix-tests.patch b/gnu/packages/patches/java-simple-xml-fix-tests.patch
new file mode 100644
index 0000000000..6270b87009
--- /dev/null
+++ b/gnu/packages/patches/java-simple-xml-fix-tests.patch
@@ -0,0 +1,37 @@
+From b3b7a305f1278ec414500bf96c4c7a7f634c941b Mon Sep 17 00:00:00 2001
+From: =?UTF-8?q?Jens=20Thee=C3=9F?= <theess@subshell.com>
+Date: Thu, 15 Sep 2016 13:08:26 +0200
+Subject: [PATCH] Dictionary uses stable order. This fixes unit tests.
+
+This is upstream pull request #15:
+https://github.com/ngallagher/simplexml/pull/15
+This software is unmaintained, this pull request will no get merged.
+The patch is modified, to match the directory layout of the tarball.
+
+---
+ src/main/java/org/simpleframework/xml/util/Dictionary.java | 4 ++--
+ 1 file changed, 2 insertions(+), 2 deletions(-)
+
+diff --git a/src/main/java/org/simpleframework/xml/util/Dictionary.java b/src/main/java/org/simpleframework/xml/util/Dictionary.java
+index 077d2514..c7327426 100644
+--- a/src/org/simpleframework/xml/util/Dictionary.java
++++ b/src/org/simpleframework/xml/util/Dictionary.java
+@@ -19,8 +19,8 @@
+ package org.simpleframework.xml.util;
+
+ import java.util.AbstractSet;
+-import java.util.HashMap;
+ import java.util.Iterator;
++import java.util.LinkedHashMap;
+
+ /**
+ * The <code>Dictionary</code> object represents a mapped set of entry
+@@ -134,7 +134,7 @@ public T remove(String name) {
+ *
+ * @see org.simpleframework.xml.util.Entry
+ */
+- private static class Table<T> extends HashMap<String, T> {
++ private static class Table<T> extends LinkedHashMap<String, T> {
+
+ /**
+ * Constructor for the <code>Table</code> object. This will
diff --git a/gnu/packages/patches/libtirpc-missing-headers.patch b/gnu/packages/patches/libtirpc-missing-headers.patch
deleted file mode 100644
index 5a96711820..0000000000
--- a/gnu/packages/patches/libtirpc-missing-headers.patch
+++ /dev/null
@@ -1,40 +0,0 @@
-Fix compilation failure with glibc 2.26 caused by missing type
-declarations:
-
-------
-xdr_sizeof.c: In function ‘x_inline’:
-xdr_sizeof.c:93:13: error: ‘uintptr_t’ undeclared (first use in this function)
- if (len < (uintptr_t)xdrs->x_base) {
-------
-
-Patch copied from upstream source repository:
-
-http://git.linux-nfs.org/?p=steved/libtirpc.git;a=commit;h=acb9a37977cf0a9630eac74af9adebf35e38e719
-
-From acb9a37977cf0a9630eac74af9adebf35e38e719 Mon Sep 17 00:00:00 2001
-From: Thorsten Kukuk <kukuk@thkukuk.de>
-Date: Tue, 14 Nov 2017 10:39:08 -0500
-Subject: [PATCH] Include stdint.h from xdr_sizeof.c to avoid missing
- declaration errors.
-
-Signed-off-by: Thorsten Kukuk <kukuk@suse.de>
-Signed-off-by: Steve Dickson <steved@redhat.com>
----
- src/xdr_sizeof.c | 1 +
- 1 file changed, 1 insertion(+)
-
-diff --git a/src/xdr_sizeof.c b/src/xdr_sizeof.c
-index d23fbd1..79d6707 100644
---- a/src/xdr_sizeof.c
-+++ b/src/xdr_sizeof.c
-@@ -39,6 +39,7 @@
- #include <rpc/xdr.h>
- #include <sys/types.h>
- #include <stdlib.h>
-+#include <stdint.h>
- #include "un-namespace.h"
-
- /* ARGSUSED */
---
-1.8.3.1
-
diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm
index 4b0454d4e2..11765b8e17 100644
--- a/gnu/packages/perl.scm
+++ b/gnu/packages/perl.scm
@@ -2044,7 +2044,7 @@ Date::Calc.")
(define-public perl-date-manip
(package
(name "perl-date-manip")
- (version "6.50")
+ (version "6.70")
(source
(origin
(method url-fetch)
@@ -2052,7 +2052,7 @@ Date::Calc.")
"Date-Manip-" version ".tar.gz"))
(sha256
(base32
- "0zd0wbf91i49753rnf7m1lw197hdl5r97mxy0n43zdmcmhvkb3qq"))))
+ "0r4k4ypb09xwhvq6das0vpx2c0xbhhhx83knq6jfpf8m55h8qi9r"))))
(build-system perl-build-system)
(native-inputs `(("perl-module-build" ,perl-module-build)))
(arguments
@@ -5760,7 +5760,7 @@ most specific one) is instantiated.")
("perl-file-configdir" ,perl-file-configdir)
("perl-file-find-rule" ,perl-file-find-rule)
("perl-hash-merge" ,perl-hash-merge)
- ("perl-moo", perl-moo)
+ ("perl-moo" ,perl-moo)
("perl-moox-file-configdir" ,perl-moox-file-configdir)
("perl-namespace-clean" ,perl-namespace-clean)))
(home-page "http://search.cpan.org/dist/MooX-ConfigFromFile/")
diff --git a/gnu/packages/photo.scm b/gnu/packages/photo.scm
index 758ed3f6f1..90bc365d05 100644
--- a/gnu/packages/photo.scm
+++ b/gnu/packages/photo.scm
@@ -481,11 +481,11 @@ a complete panorama and stitch any series of overlapping pictures.")
(build-system cmake-build-system)
(arguments
'(#:tests? #f ; no test suite
+ #:build-type "release"
#:configure-flags
(list (string-append "-DLENSFUNDBDIR="
(assoc-ref %build-inputs "lensfun")
"/share/lensfun")
- "-DCMAKE_BUILD_TYPE=release"
; Don't optimize the build for the host machine. See the file
; 'ProcessorTargets.cmake' in the source distribution for more
; information.
diff --git a/gnu/packages/protobuf.scm b/gnu/packages/protobuf.scm
index 17d3bacf02..877c9c9c84 100644
--- a/gnu/packages/protobuf.scm
+++ b/gnu/packages/protobuf.scm
@@ -3,7 +3,7 @@
;;; Copyright © 2016 Daniel Pimentel <d4n1@d4n1.org>
;;; Copyright © 2016 Leo Famulari <leo@famulari.name>
;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
-;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -149,14 +149,14 @@ code.")
(define-public python-protobuf
(package
(name "python-protobuf")
- (version "3.4.0")
+ (version "3.5.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "protobuf" version))
(sha256
(base32
- "0x33xz85cy5ilg1n2rn92l4qwlcw25vzysx2ldv7k625yjg600pg"))))
+ "1q4b1m55w4gvcbzklbk8iylaii98n4in41k27d94w8ypbwlrm1q9"))))
(build-system python-build-system)
(propagated-inputs
`(("python-six" ,python-six)))
diff --git a/gnu/packages/python-crypto.scm b/gnu/packages/python-crypto.scm
index f35c8c5042..f709ed9e1d 100644
--- a/gnu/packages/python-crypto.scm
+++ b/gnu/packages/python-crypto.scm
@@ -122,14 +122,14 @@ John the Ripper).")
(define-public python-paramiko
(package
(name "python-paramiko")
- (version "2.1.2")
+ (version "2.1.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "paramiko" version))
(sha256
(base32
- "04734n0wy3hxk6rij4fr29in5jmr70nxpc7pqi2ksbjysfz4kbjz"))))
+ "1pf0zxzhgyy4avby3ajg5hp18b0d8iirbkdfw53z0h6w611bp0wk"))))
(build-system python-build-system)
(arguments
'(#:phases
@@ -281,14 +281,14 @@ is used by the Requests library to verify HTTPS requests.")
(define-public python-cryptography-vectors
(package
(name "python-cryptography-vectors")
- (version "2.1.4")
+ (version "2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cryptography_vectors" version))
(sha256
(base32
- "1jm5c33qaz297sf99kz9kw8xi792ap9m6bwf0dfylls8z3rv9i3q"))))
+ "03cpmi5azvipphmva7dxv8k3w7ffblvn5452rs5r6smdhxyiqq6g"))))
(build-system python-build-system)
(home-page "https://github.com/pyca/cryptography")
(synopsis "Test vectors for the cryptography package")
@@ -303,14 +303,14 @@ is used by the Requests library to verify HTTPS requests.")
(define-public python-cryptography
(package
(name "python-cryptography")
- (version "2.1.4")
+ (version "2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cryptography" version))
(sha256
(base32
- "14aj5ipbj1w5kba2hv6323954pachhflfrjhhmkjwssv3hvngng4"))))
+ "0j2gwr4qxvskip77z4n9nqvr4vi243n3bzij18ay4drc6sg2g87m"))))
(build-system python-build-system)
(inputs
`(("openssl" ,openssl)))
@@ -556,7 +556,7 @@ PKCS#8, PKCS#12, PKCS#5, X.509 and TSP.")
(define-public python-pynacl
(package
(name "python-pynacl")
- (version "1.1.2")
+ (version "1.2.0")
(source
(origin
(method url-fetch)
@@ -567,7 +567,7 @@ PKCS#8, PKCS#12, PKCS#5, X.509 and TSP.")
#t))
(sha256
(base32
- "135gz0020fqx8fbr9izpwyq49aww202nkqacq0cw61xz99sjpx9j"))))
+ "01vjq0pxyw1mxaqy013hzs8nknmvg3kpzlzmh69jxznyipgvria5"))))
(build-system python-build-system)
(arguments
`(#:phases
@@ -577,7 +577,8 @@ PKCS#8, PKCS#12, PKCS#5, X.509 and TSP.")
(setenv "SODIUM_INSTALL" "system")
#t)))))
(native-inputs
- `(("python-pytest" ,python-pytest)))
+ `(("python-hypothesis" ,python-hypothesis)
+ ("python-pytest" ,python-pytest)))
(propagated-inputs
`(("python-cffi" ,python-cffi)
("python-six" ,python-six)
diff --git a/gnu/packages/python-web.scm b/gnu/packages/python-web.scm
index 3b907cafcf..7974c005c2 100644
--- a/gnu/packages/python-web.scm
+++ b/gnu/packages/python-web.scm
@@ -823,7 +823,7 @@ internationalized messages within program source text.")
'(#:tests? #f)) ; FIXME: Tests can't find zope.event.
(propagated-inputs
`(("python-zope-event" ,python-zope-event)
- ("python-zope-exceptions", python-zope-exceptions)
+ ("python-zope-exceptions" ,python-zope-exceptions)
("python-zope-interface" ,python-zope-interface)))
(native-inputs
`(("python-zope-testing" ,python-zope-testing)
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index f3a75c30e1..51cc1cf5f0 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -1232,14 +1232,14 @@ after Andy Lester’s Perl module WWW::Mechanize.")
(define-public python-simplejson
(package
(name "python-simplejson")
- (version "3.10.0")
+ (version "3.13.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "simplejson" version))
(sha256
(base32
- "1qhwsykjlb85igb4cfl6v6gkprzbbg8gyqdd7zscc8w3x0ifcfwm"))))
+ "02jg5nixffqyicfqdl4dil82fh1z9p2as758wp0nqwalw0hcykjc"))))
(build-system python-build-system)
(home-page "http://simplejson.readthedocs.org/en/latest/")
(synopsis
@@ -1925,7 +1925,7 @@ version numbers.")
(define-public python-jsonschema
(package
(name "python-jsonschema")
- (version "2.5.1")
+ (version "2.6.0")
(source (origin
(method url-fetch)
(uri
@@ -1934,7 +1934,7 @@ version numbers.")
version ".tar.gz"))
(sha256
(base32
- "0hddbqjm4jq63y8jf44nswina1crjs16l9snb6m3vvgyg31klrrn"))))
+ "00kf3zmpp9ya4sydffpifn0j0mzm342a2vzh82p6r0vh10cg7xbg"))))
(build-system python-build-system)
(arguments
'(#:phases
@@ -4125,13 +4125,13 @@ PNG, PostScript, PDF, and SVG file output.")
(define-public python-decorator
(package
(name "python-decorator")
- (version "4.1.2")
+ (version "4.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "decorator" version))
(sha256
- (base32 "1d8npb11kxyi36mrvjdpcjij76l5zfyrz2f820brf0l0rcw4vdkw"))))
+ (base32 "03iaf116rm3w8b4agb8hzf6z9331mrvi4khfxq35zkx17sgxsikx"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; no test target
(home-page "https://pypi.python.org/pypi/decorator/")
@@ -4497,14 +4497,14 @@ without using the configuration machinery.")
(define-public python-jupyter-core
(package
(name "python-jupyter-core")
- (version "4.2.1")
+ (version "4.4.0")
(source
(origin
(method url-fetch)
(uri (string-append (pypi-uri "jupyter_core" version)))
(sha256
(base32
- "1cy7inv218dgh4m1fbzbsiqpz733ylgjrj62jxqpfzs3r2cm7ic9"))))
+ "1dy083rarba8prn9f9srxq3c7n7vyql02ycrqq306c40lr57aw5s"))))
(build-system python-build-system)
;; FIXME: not sure how to run the tests
(arguments `(#:tests? #f))
@@ -5683,7 +5683,7 @@ markdown_py is also provided to convert Markdown files to HTML.")
(define-public python-ptyprocess
(package
(name "python-ptyprocess")
- (version "0.5.1")
+ (version "0.5.2")
(source
(origin
(method url-fetch)
@@ -5692,7 +5692,7 @@ markdown_py is also provided to convert Markdown files to HTML.")
version ".tar.gz"))
(sha256
(base32
- "19l1xrjn4l9gjz01s3vg92gn2dd9d8mw1v86ppkzlnr9m5iwwc05"))))
+ "0ra31k10v3629xq0kdn8lwmfbi97anmk48r03yvh7mks0kq96hg6"))))
(build-system python-build-system)
(native-inputs
`(("python-nose" ,python-nose)))
@@ -6502,14 +6502,14 @@ Debian-related files, such as:
(define-public python-nbformat
(package
(name "python-nbformat")
- (version "4.3.0")
+ (version "4.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nbformat" version))
(sha256
(base32
- "12s7j4qja8b5bs1kyw5dzmrqbjxxj8wk52cyasbiqbv7fblcrssz"))))
+ "00nlf08h8yc4q73nphfvfhxrcnilaqanb8z0mdy6nxk0vzq4wjgp"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ; no test target
(propagated-inputs
@@ -6554,7 +6554,7 @@ Jupyter Notebook format and Python APIs for working with notebooks.")
(define-public python-entrypoints
(package
(name "python-entrypoints")
- (version "0.2.2")
+ (version "0.2.3")
(source
(origin
(method url-fetch)
@@ -6563,7 +6563,7 @@ Jupyter Notebook format and Python APIs for working with notebooks.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "0azqlkh3j0za080lsf5crnhaxx3c93k9dpv5ihkhf5cppgw5sjz5"))))
+ "1pdvgfr5bxyvnfvxbsd3zi0dh3il71pc4k6rinx6zpps91b84a56"))))
(build-system python-build-system)
;; The package does not come with a setup.py file, so we have to generate
;; one ourselves.
@@ -6760,14 +6760,14 @@ in the data.")
(define-public python-jupyter-console
(package
(name "python-jupyter-console")
- (version "5.0.0")
+ (version "5.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jupyter_console" version))
(sha256
(base32
- "04acmkwsi99rcg3vb54c6n492zv35s92h2ahabc0w6wj976cipvx"))))
+ "1kam1qzgwr7srhm5r6aj90di5sws4bq0jmiw15452ddamb9yspal"))))
(build-system python-build-system)
;; FIXME: it's not clear how to run the tests.
(arguments `(#:tests? #f))
@@ -8954,14 +8954,14 @@ data in Python.")
(define-public python-kazoo
(package
(name "python-kazoo")
- (version "2.2.1")
+ (version "2.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kazoo" version))
(sha256
(base32
- "10pb864if9qi2pq9lfb9m8f7z7ss6rml80gf1d9h64lap5crjnjj"))))
+ "16y213k7r8shyn2zw1k6lkzjgcrvm441pqv8scvcjixhvpbx3hm7"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; XXX: needs zookeeper
(propagated-inputs
@@ -9061,13 +9061,13 @@ etc.")
(define-public python-chai
(package
(name "python-chai")
- (version "1.1.1")
+ (version "1.1.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "chai" version))
(sha256
(base32
- "016kf3irrclpkpvcm7q0gmkfibq7jgy30a9v73pp42bq9h9a32bl"))))
+ "1k6n6zbgrrs83crp6mr3yqj9zlv40b8rpisyrliwsq7naml2p3gz"))))
(build-system python-build-system)
(home-page "https://github.com/agoragames/chai")
(synopsis "Mocking framework for Python")
@@ -12044,7 +12044,7 @@ library.")
"08if5yax1xn5yfp8p3765ccjmfcv9di7i4m5jckgnwvdsgznwkbj"))))
(build-system python-build-system)
(native-inputs `(("pkg-config" ,pkg-config)
- ("python-cython", python-cython)))
+ ("python-cython" ,python-cython)))
(home-page "https://github.com/aresch/rencode")
(synopsis "Serialization of heterogeneous data structures")
(description
@@ -12186,14 +12186,14 @@ design and layout.")
(define-public python-pkginfo
(package
(name "python-pkginfo")
- (version "1.4.1")
+ (version "1.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pkginfo" version))
(sha256
(base32
- "17pqjfpq3c6xzdmk8pski6jcjgjv78q00zjf2bgzb668pzm6l6mv"))))
+ "0x6lm17p1ks031mj6pajyp4rkq74vpqq8qwjb7ikgwmkli1day2q"))))
(build-system python-build-system)
(arguments
;; The tests are broken upstream.
@@ -12227,7 +12227,7 @@ created by running @code{python setup.py develop}).")
(build-system python-build-system)
(propagated-inputs
`(("python-tqdm" ,python-tqdm)
- ("python-pkginfo", python-pkginfo)
+ ("python-pkginfo" ,python-pkginfo)
("python-requests" ,python-requests)
("python-requests-toolbelt" ,python-requests-toolbelt)))
(home-page "https://github.com/pypa/twine")
@@ -12637,7 +12637,7 @@ is the new Pyro version that is actively developed.")
`(("netcdf" ,netcdf)))
(propagated-inputs
`(("python-numpy" ,python2-numpy-1.8)
- ("python-pyro", python2-pyro)))
+ ("python-pyro" ,python2-pyro)))
(arguments
;; ScientificPython is not compatible with Python 3
`(#:python ,python-2
@@ -12702,14 +12702,14 @@ and works only with Python 2 and NumPy < 1.9.")
(define-public python-phonenumbers
(package
(name "python-phonenumbers")
- (version "8.8.9")
+ (version "8.9.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "phonenumbers" version))
(sha256
(base32
- "1lhhxmx3hk0b5891nc0p82dl5bq2w9cqbawmh8j5zy587af2j6fq"))))
+ "03fmrgb4r8x3ykmddjs9i3zhs703in8smikj3a6447blqpimwyh1"))))
(build-system python-build-system)
(home-page
"https://github.com/daviddrysdale/python-phonenumbers")
@@ -12984,7 +12984,7 @@ and other tools.")
#t)))))
(propagated-inputs
`(("python-pygments" ,python-pygments)
- ("python-requests", python-requests)
+ ("python-requests" ,python-requests)
("python-babel" ,python-babel) ; optional, for internationalization
("python-curtsies" ,python-curtsies) ; >= 0.1.18
("python-greenlet" ,python-greenlet)
@@ -13057,7 +13057,7 @@ interpreter. bpython's main features are
(synopsis "Python library for monitoring inotify events")
(description
"@code{pyinotify} provides a Python interface for monitoring
-filesystem events on Linux.")
+file system events on Linux.")
(license license:expat)))
(define-public python2-pyinotify
diff --git a/gnu/packages/qt.scm b/gnu/packages/qt.scm
index ec8995a92b..b505d8d708 100644
--- a/gnu/packages/qt.scm
+++ b/gnu/packages/qt.scm
@@ -1944,7 +1944,7 @@ different kinds of sliders, and much more.")
("libwebp" ,libwebp)
("sqlite" ,sqlite)
("fontconfig" ,fontconfig)
- ("libxrender", libxrender)
+ ("libxrender" ,libxrender)
("qtbase" ,qtbase)
("qtdeclarative" ,qtdeclarative)
("qtmultimedia" ,qtmultimedia)
diff --git a/gnu/packages/ratpoison.scm b/gnu/packages/ratpoison.scm
index b1f012eb79..901d6fc55a 100644
--- a/gnu/packages/ratpoison.scm
+++ b/gnu/packages/ratpoison.scm
@@ -78,7 +78,7 @@
("readline" ,readline)
("xorgproto" ,xorgproto)))
(native-inputs
- `(("perl",perl)
+ `(("perl" ,perl)
("pkg-config" ,pkg-config)
("ratpoison.desktop" ,ratpoison.desktop)))
(home-page "https://www.nongnu.org/ratpoison/")
diff --git a/gnu/packages/rdesktop.scm b/gnu/packages/rdesktop.scm
index 1a2d0412d1..bd2b5737e9 100644
--- a/gnu/packages/rdesktop.scm
+++ b/gnu/packages/rdesktop.scm
@@ -1,6 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
+;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -111,9 +112,9 @@ to remotely control a user's Windows desktop.")
("zlib" ,zlib)
("openssl" ,openssl)))
(arguments
- `(#:configure-flags
- (list "-DCMAKE_BUILD_TYPE=RELEASE"
- "-DWITH_JPEG=ON"
+ `(#:build-type "RELEASE"
+ #:configure-flags
+ (list "-DWITH_JPEG=ON"
,@(if (string-prefix? "x86_64"
(or (%current-target-system)
(%current-system)))
diff --git a/gnu/packages/ruby.scm b/gnu/packages/ruby.scm
index ee5d20955c..dcf4cda26a 100644
--- a/gnu/packages/ruby.scm
+++ b/gnu/packages/ruby.scm
@@ -36,6 +36,7 @@
#:use-module (gnu packages autotools)
#:use-module (gnu packages java)
#:use-module (gnu packages libffi)
+ #:use-module (gnu packages maths)
#:use-module (gnu packages networking)
#:use-module (gnu packages python)
#:use-module (gnu packages ragel)
@@ -665,6 +666,72 @@ line of code.")
;; of the Expat license.
(license license:bsd-3)))
+(define-public ruby-asciidoctor
+ (package
+ (name "ruby-asciidoctor")
+ (version "1.5.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "asciidoctor" version))
+ (sha256
+ (base32
+ "1jnf9y8q5asfdzilp8vcqafrc2faj719df4yh1993mh6jd0iqdy4"))))
+ (build-system ruby-build-system)
+ (arguments
+ `(#:test-target "test:all"
+ #:phases
+ (modify-phases %standard-phases
+ (add-before 'check 'remove-circular-tests
+ (lambda _
+ ;; Remove tests that require circular dependencies to load or pass.
+ (delete-file "test/invoker_test.rb")
+ (delete-file "test/converter_test.rb")
+ (delete-file "test/options_test.rb")
+ #t)))))
+ (native-inputs
+ `(("ruby-minitest" ,ruby-minitest)
+ ("ruby-nokogiri" ,ruby-nokogiri)
+ ("ruby-asciimath" ,ruby-asciimath)
+ ("ruby-coderay" ,ruby-coderay)))
+ (synopsis "Converter from AsciiDoc content to other formats")
+ (description
+ "Asciidoctor is a text processor and publishing toolchain for converting
+AsciiDoc content to HTML5, DocBook 5 (or 4.5) and other formats.")
+ (home-page "http://asciidoctor.org")
+ (license license:expat)))
+
+(define-public ruby-sporkmonger-rack-mount
+ ;; Testing the addressable gem requires a newer commit than that released, so
+ ;; use an up to date version.
+ (let ((revision "1")
+ (commit "076aa2c47d9a4c081f1e9bcb56a826a9e72bd5c3"))
+ (package
+ (name "ruby-sporkmonger-rack-mount")
+ (version (git-version "0.8.3" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/sporkmonger/rack-mount.git")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1scx273g3xd93424x9lxc4zyvcp2niknbw5mkz6wkivpf7xsyxdq"))))
+ (build-system ruby-build-system)
+ (arguments
+ ;; Tests currently fail so disable them.
+ ;; https://github.com/sporkmonger/rack-mount/pull/1
+ `(#:tests? #f))
+ (propagated-inputs `(("ruby-rack" ,ruby-rack)))
+ (synopsis "Stackable dynamic tree based Rack router")
+ (description
+ "@code{Rack::Mount} supports Rack's @code{X-Cascade} convention to
+continue trying routes if the response returns pass. This allows multiple
+routes to be nested or stacked on top of each other.")
+ (home-page "https://github.com/sporkmonger/rack-mount")
+ (license license:expat))))
+
(define-public ruby-ci-reporter
(package
(name "ruby-ci-reporter")
@@ -824,6 +891,29 @@ functions.")
(home-page "https://github.com/ahoward/options")
(license license:ruby)))
+(define-public ruby-erubis
+ (package
+ (name "ruby-erubis")
+ (version "2.7.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "erubis" version))
+ (sha256
+ (base32
+ "1fj827xqjs91yqsydf0zmfyw9p4l2jz5yikg3mppz6d7fi8kyrb3"))))
+ (build-system ruby-build-system)
+ (arguments
+ '(#:tests? #f)) ; tests do not run properly with Ruby 2.0
+ (synopsis "Implementation of embedded Ruby (eRuby)")
+ (description
+ "Erubis is a fast implementation of embedded Ruby (eRuby) with several
+features such as multi-language support, auto escaping, auto trimming spaces
+around @code{<% %>}, a changeable embedded pattern, and Ruby on Rails
+support.")
+ (home-page "http://www.kuwata-lab.com/erubis/")
+ (license license:expat)))
+
(define-public ruby-orderedhash
(package
(name "ruby-orderedhash")
@@ -3293,6 +3383,106 @@ into a single method call.")
(home-page "https://rack.github.io/")
(license license:expat)))
+(define-public ruby-rack-test
+ (package
+ (name "ruby-rack-test")
+ (version "0.8.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "rack-test" version))
+ (sha256
+ (base32
+ "14ij39zywvr1i9f6jsixfg4zxi2q1m1n1nydvf47f0b6sfc9mv1g"))))
+ (build-system ruby-build-system)
+ (arguments
+ ;; Disable tests because of circular dependencies: requires sinatra,
+ ;; which requires rack-protection, which requires rack-test. Instead
+ ;; simply require the library.
+ `(#:phases
+ (modify-phases %standard-phases
+ (replace 'check
+ (lambda _
+ (invoke "ruby" "-Ilib" "-r" "rack/test"))))))
+ (propagated-inputs
+ `(("ruby-rack" ,ruby-rack)))
+ (synopsis "Testing API for Rack applications")
+ (description
+ "Rack::Test is a small, simple testing API for Rack applications. It can
+be used on its own or as a reusable starting point for Web frameworks and
+testing libraries to build on.")
+ (home-page "https://github.com/rack-test/rack-test")
+ (license license:expat)))
+
+(define-public ruby-rack-protection
+ (package
+ (name "ruby-rack-protection")
+ (version "2.0.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "rack-protection" version))
+ (sha256
+ (base32
+ "0ywmgh7x8ljf7jfnq5hmfzki3f803waji3fcvi107w7mlyflbng7"))))
+ (build-system ruby-build-system)
+ (arguments
+ '(;; Tests missing from the gem
+ #:tests? #f))
+ (propagated-inputs
+ `(("ruby-rack" ,ruby-rack)))
+ (native-inputs
+ `(("bundler" ,bundler)
+ ("ruby-rspec" ,ruby-rspec-2)
+ ("ruby-rack-test" ,ruby-rack-test)))
+ (synopsis "Rack middleware that protects against typical web attacks")
+ (description "Rack middleware that can be used to protect against typical
+web attacks. It can protect all Rack apps, including Rails. For instance, it
+protects against cross site request forgery, cross site scripting,
+clickjacking, directory traversal, session hijacking and IP spoofing.")
+ (home-page "https://github.com/sinatra/sinatra/tree/master/rack-protection")
+ (license license:expat)))
+
+(define-public ruby-contest
+ (package
+ (name "ruby-contest")
+ (version "0.1.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "contest" version))
+ (sha256
+ (base32
+ "1p9f2292b7b0fbrcjswvj9v01z7ig5ig52328wyqcabgb553qsdf"))))
+ (build-system ruby-build-system)
+ (synopsis "Write declarative tests using nested contexts")
+ (description
+ "Contest allows writing declarative @code{Test::Unit} tests using nested
+contexts without performance penalties.")
+ (home-page "https://github.com/citrusbyte/contest")
+ (license license:expat)))
+
+(define-public ruby-creole
+ (package
+ (name "ruby-creole")
+ (version "0.5.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "creole" version))
+ (sha256
+ (base32
+ "00rcscz16idp6dx0dk5yi5i0fz593i3r6anbn5bg2q07v3i025wm"))))
+ (build-system ruby-build-system)
+ (native-inputs
+ `(("ruby-bacon" ,ruby-bacon)))
+ (synopsis "Creole markup language converter")
+ (description
+ "Creole is a lightweight markup language and this library for converting
+creole to @code{HTML}.")
+ (home-page "https://github.com/minad/creole")
+ (license license:ruby)))
+
(define-public ruby-docile
(package
(name "ruby-docile")
@@ -3526,6 +3716,55 @@ used to create both network servers and clients.")
(home-page "http://rubyeventmachine.com")
(license (list license:ruby license:gpl3)))) ; GPLv3 only AFAICT
+(define-public ruby-ruby-engine
+ (package
+ (name "ruby-ruby-engine")
+ (version "1.0.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "ruby_engine" version))
+ (sha256
+ (base32
+ "1d0sd4q50zkcqhr395wj1wpn2ql52r0fpwhzjfvi1bljml7k546v"))))
+ (build-system ruby-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-before 'check 'clean-up
+ (lambda _
+ (delete-file "Gemfile.lock")
+ (substitute* "ruby_engine.gemspec"
+ ;; Remove unnecessary imports that would entail further
+ ;; dependencies.
+ ((".*<rdoc.*") "")
+ ((".*<rubygems-tasks.*") "")
+ ;; Remove extraneous .gem file
+ (("\\\"pkg/ruby_engine-1.0.0.gem\\\",") "")
+ ;; Soften rake dependency
+ (("%q<rake>.freeze, \\[\\\"~> 10.0\\\"\\]")
+ "%q<rake>.freeze, [\">= 10.0\"]")
+ ;; Soften the rspec dependency
+ (("%q<rspec>.freeze, \\[\\\"~> 2.4\\\"\\]")
+ "%q<rspec>.freeze, [\">= 2.4\"]"))
+ (substitute* "Rakefile"
+ (("require 'rubygems/tasks'") "")
+ (("Gem::Tasks.new") ""))
+ ;; Remove extraneous .gem file that otherwise gets installed.
+ (delete-file "pkg/ruby_engine-1.0.0.gem")
+ #t)))))
+ (native-inputs
+ `(("bundler" ,bundler)
+ ("ruby-rake" ,ruby-rake)
+ ("ruby-rspec" ,ruby-rspec)))
+ (synopsis "Simplifies checking for Ruby implementation")
+ (description
+ "@code{ruby_engine} provides an RubyEngine class that can be used to
+check which implementation of Ruby is in use. It can provide the interpreter
+name and provides query methods such as @{RubyEngine.mri?}.")
+ (home-page "https://github.com/janlelis/ruby_engine")
+ (license license:expat)))
+
(define-public ruby-turn
(package
(name "ruby-turn")
@@ -4721,3 +4960,24 @@ thing this library does today is convert org-mode files to HTML or Textile or
Markdown.")
(home-page "https://github.com/wallyqs/org-ruby")
(license license:expat)))
+
+(define-public ruby-rake
+ (package
+ (name "ruby-rake")
+ (version "12.3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "rake" version))
+ (sha256
+ (base32
+ "190p7cs8zdn07mjj6xwwsdna3g0r98zs4crz7jh2j2q5b0nbxgjf"))))
+ (build-system ruby-build-system)
+ (native-inputs
+ `(("bundler" ,bundler)))
+ (synopsis "Rake is a Make-like program implemented in Ruby")
+ (description
+ "Rake is a Make-like program where tasks and dependencies are specified
+in standard Ruby syntax.")
+ (home-page "https://github.com/ruby/rake")
+ (license license:expat)))
diff --git a/gnu/packages/sdl.scm b/gnu/packages/sdl.scm
index 1bc2778da1..f98ea8c048 100644
--- a/gnu/packages/sdl.scm
+++ b/gnu/packages/sdl.scm
@@ -122,9 +122,9 @@ joystick, and graphics hardware.")
("fcitx" ,fcitx) ; helps with CJK input
("glib" ,glib)
("ibus" ,ibus)
- ("libxkbcommon", libxkbcommon)
- ("wayland", wayland)
- ("wayland-protocols", wayland-protocols))
+ ("libxkbcommon" ,libxkbcommon)
+ ("wayland" ,wayland)
+ ("wayland-protocols" ,wayland-protocols))
(package-inputs sdl)))
(license bsd-3)))
diff --git a/gnu/packages/serialization.scm b/gnu/packages/serialization.scm
index 8e6f5d94d9..57ba682305 100644
--- a/gnu/packages/serialization.scm
+++ b/gnu/packages/serialization.scm
@@ -8,7 +8,7 @@
;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
;;; Copyright © 2017 ng0 <ng0@infotropique.org>
-;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
;;;
;;; This file is part of GNU Guix.
@@ -431,10 +431,10 @@ to generate and parse. The two primary functions are @code{cbor.loads} and
"0blc978wc5h91662vai24xj92c3bx56y6hzid90qva7il302jl64"))))
(build-system cmake-build-system)
(arguments
- '(#:configure-flags
+ '(#:build-type "Release"
+ #:configure-flags
(list (string-append "-DCMAKE_INSTALL_LIBDIR="
- (assoc-ref %outputs "out") "/lib")
- "-DCMAKE_BUILD_TYPE=Release")))
+ (assoc-ref %outputs "out") "/lib"))))
(home-page "https://google.github.io/flatbuffers/")
(synopsis "Memory-efficient serialization library")
(description "FlatBuffers is a cross platform serialization library for C++,
diff --git a/gnu/packages/sml.scm b/gnu/packages/sml.scm
index b9bd7a7e82..1d7fd3fb51 100644
--- a/gnu/packages/sml.scm
+++ b/gnu/packages/sml.scm
@@ -42,7 +42,7 @@
(build-system gnu-build-system)
(inputs
`(("gmp" ,gmp)
- ("lesstif",lesstif)
+ ("lesstif" ,lesstif)
("libffi" ,libffi)
("libx11" ,libx11)
("libxt" ,libxt)))
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 936cce429f..e140f4d043 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -271,7 +271,7 @@ as.POSIXct(if (\"\" != Sys.getenv(\"SOURCE_DATE_EPOCH\")) {\
(list (search-path-specification
(variable "R_LIBS_SITE")
(files (list "site-library/")))))
- (home-page "http://www.r-project.org/")
+ (home-page "https://www.r-project.org/")
(synopsis "Environment for statistical computing and graphics")
(description
"R is a language and environment for statistical computing and graphics.
@@ -2358,13 +2358,13 @@ tools to simplify the devolpment of R packages.")
(define-public r-withr
(package
(name "r-withr")
- (version "2.1.1")
+ (version "2.1.2")
(source (origin
(method url-fetch)
(uri (cran-uri "withr" version))
(sha256
(base32
- "17pbllxv18gf1mli9mm5px4wzp364907a4wrl20r1y5q8qwawpxx"))))
+ "11j6zykklxnvp4xqsr6a2xib665i38m3khdspp887nwagmvnydj1"))))
(build-system r-build-system)
(home-page "https://github.com/jimhester/withr")
(synopsis "Run code with temporarily modified global state")
@@ -5018,7 +5018,7 @@ using modular prediction and response module classes.")
`(("r-matrix" ,r-matrix)
("r-matrixmodels" ,r-matrixmodels)
("r-sparsem" ,r-sparsem)))
- (home-page "http://www.r-project.org")
+ (home-page "https://www.r-project.org")
(synopsis "Quantile regression")
(description
"This package provides an estimation and inference methods for models
diff --git a/gnu/packages/syncthing.scm b/gnu/packages/syncthing.scm
index ed59a5b922..22dc8af7f3 100644
--- a/gnu/packages/syncthing.scm
+++ b/gnu/packages/syncthing.scm
@@ -1693,7 +1693,7 @@ using sh's word-splitting rules.")
'(#:import-path "github.com/zillode/notify"))
(propagated-inputs
`(("go-golang-org-x-sys-unix" ,go-golang-org-x-sys-unix)))
- (synopsis "Filesystem event notification library")
+ (synopsis "File system event notification library")
(description "This package provides @code{notify}, a file system event
notification library in Go.")
(home-page "https://github.com/zillode/notify")
@@ -1872,8 +1872,8 @@ Prometheus metrics.")
(arguments
'(#:import-path "github.com/prometheus/procfs"))
(synopsis "Go library for reading @file{/proc}")
- (description "This Go package @code{procfs} provides functions to retrieve
-system, kernel and process metrics from the pseudo-filesystem @file{/proc}.")
+ (description "The @code{procfs} Go package provides functions to retrieve
+system, kernel, and process metrics from the @file{/proc} pseudo file system.")
(home-page "https://github.com/prometheus/procfs")
(license asl2.0))))
diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm
index efc57d36ed..48c5f1f979 100644
--- a/gnu/packages/terminals.scm
+++ b/gnu/packages/terminals.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2015, 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Mckinley Olsen <mck.olsen@gmail.com>
;;; Copyright © 2016, 2017 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2016 David Craven <david@craven.ch>
@@ -65,22 +65,21 @@
(define-public tilda
(package
(name "tilda")
- (version "1.3.3")
+ (version "1.4.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/lanoxx/tilda/archive/"
"tilda-" version ".tar.gz"))
(sha256
(base32
- "1cc4qbg1m3i04lj5p6i6xbd0zvy1320pxdgmjhz5p3j95ibsbfki"))))
+ "0w2hry2bqcqrkik4l100b1a9jlsih6sq8zwhfpl8zzfq20i00lfs"))))
(build-system glib-or-gtk-build-system)
(arguments
- `(#:phases (modify-phases %standard-phases
- (add-before 'patch-source-shebangs 'autogen
- (lambda _ ; Avoid running ./configure.
- (substitute* "autogen.sh"
- (("^.*\\$srcdir/configure.*") ""))
- (zero? (system* "sh" "autogen.sh")))))))
+ '(#:phases (modify-phases %standard-phases
+ (add-before 'patch-source-shebangs 'bootstrap
+ (lambda _
+ (setenv "NOCONFIGURE" "true")
+ (invoke "sh" "autogen.sh"))))))
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)
@@ -128,9 +127,9 @@ configurable through a graphical wizard.")
(string-append "DESTDIR="
(assoc-ref %outputs "out")))))
(inputs
- `(("vte", vte-ng)
- ("gtk+", gtk+)
- ("ncurses", ncurses)))
+ `(("vte" ,vte-ng)
+ ("gtk+" ,gtk+)
+ ("ncurses" ,ncurses)))
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -293,10 +292,10 @@ multi-seat support, a replacement for @command{mingetty}, and more.")
#:phases (modify-phases %standard-phases
(delete 'configure))
#:test-target "test"))
- (inputs `(("ncurses", ncurses)))
- (native-inputs `(("libtool", libtool)
+ (inputs `(("ncurses" ,ncurses)))
+ (native-inputs `(("libtool" ,libtool)
("perl-test-harness" ,perl-test-harness)
- ("pkg-config", pkg-config)))
+ ("pkg-config" ,pkg-config)))
(synopsis "Keyboard entry processing library for terminal-based programs")
(description
"Libtermkey handles all the necessary logic to recognise special keys, UTF-8
@@ -695,7 +694,7 @@ terminal or piped input.")
(delete-file "tests/test_input_output.py")
#t)))))
(propagated-inputs
- `(("python-wcwidth", python-wcwidth)))
+ `(("python-wcwidth" ,python-wcwidth)))
(native-inputs
`(("python-pytest-runner" ,python-pytest-runner)
("python-pytest" ,python-pytest)))
@@ -765,7 +764,7 @@ than a terminal.")
(invoke "nosetests" "-v"))))))
(propagated-inputs
`(("python-blessings" ,python-blessings)
- ("python-wcwidth", python-wcwidth)))
+ ("python-wcwidth" ,python-wcwidth)))
(native-inputs
`(("python-mock" ,python-mock)
("python-pyte" ,python-pyte)
diff --git a/gnu/packages/terraform.scm b/gnu/packages/terraform.scm
new file mode 100644
index 0000000000..71b214ed0a
--- /dev/null
+++ b/gnu/packages/terraform.scm
@@ -0,0 +1,52 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2018 Christopher Baines <mail@cbaines.net>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages terraform)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix packages)
+ #:use-module (guix download)
+ #:use-module (guix git-download)
+ #:use-module (guix build-system go)
+ #:use-module (gnu packages golang))
+
+(define-public terraform-docs
+ (package
+ (name "terraform-docs")
+ (version "0.3.0")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/segmentio/terraform-docs")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0xchpik32ab8m89s6jv671vswg8xhprfvh6s5md0zd36482d2nmm"))))
+ (build-system go-build-system)
+ (native-inputs
+ `(("go-github-com-hashicorp-hcl" ,go-github-com-hashicorp-hcl)
+ ("go-github-com-tj-docopt" ,go-github-com-tj-docopt)))
+ (arguments
+ '(#:import-path "github.com/segmentio/terraform-docs"))
+ (synopsis "Generate documentation from Terraform modules")
+ (description
+ "The @code{terraform-docs} utility can generate documentation describing
+the inputs and outputs for modules of the Terraform infrastructure management
+tool. These can be shown, or written to a file in JSON or Markdown formats.")
+ (home-page "https://github.com/segmentio/terraform-docs")
+ (license license:expat)))
diff --git a/gnu/packages/tex.scm b/gnu/packages/tex.scm
index 30033e1041..1416a00251 100644
--- a/gnu/packages/tex.scm
+++ b/gnu/packages/tex.scm
@@ -3591,7 +3591,7 @@ this is particularly useful when using scalable versions of the CM
fonts (Bakoma, or the versions from BSR/Y&Y, or True Type versions from Kinch,
PCTeX, etc.). In fact, since modern distributions will automatically generate
any bitmap font you might need, @code{type1cm} has wider application than just
-those using scaleable versions of the fonts. Note that the LaTeX distribution
+those using scalable versions of the fonts. Note that the LaTeX distribution
now contains a package @code{fix-cm},f which performs the task of
@code{type1cm}, as well as doing the same job for T1- and TS1-encoded
@code{ec} fonts.")
diff --git a/gnu/packages/text-editors.scm b/gnu/packages/text-editors.scm
index caec009f1a..efbea450e0 100644
--- a/gnu/packages/text-editors.scm
+++ b/gnu/packages/text-editors.scm
@@ -81,10 +81,10 @@
(list (search-path-specification
(variable "VIS_PATH")
(files '("share/vis")))))
- (inputs `(("lua", lua)
- ("ncurses", ncurses)
- ("libtermkey", libtermkey)
- ("lua-lpeg", lua-lpeg)
+ (inputs `(("lua" ,lua)
+ ("ncurses" ,ncurses)
+ ("libtermkey" ,libtermkey)
+ ("lua-lpeg" ,lua-lpeg)
("tre" ,tre)))
(synopsis "Vim-like text editor")
(description
diff --git a/gnu/packages/tls.scm b/gnu/packages/tls.scm
index 19c490cb57..a33c1a5235 100644
--- a/gnu/packages/tls.scm
+++ b/gnu/packages/tls.scm
@@ -500,13 +500,13 @@ netcat implementation that supports TLS.")
(package
(name "python-acme")
;; Remember to update the hash of certbot when updating python-acme.
- (version "0.22.0")
+ (version "0.22.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "acme" version))
(sha256
(base32
- "1s2zamyb99zdyga3c75xxgnj0z2hixw8wv24v1l4p49fncnxab2a"))))
+ "0cbw062xmaqhmdb5d04d2xs9aacmq1i7yvnd37gw1d71qgxlnmsz"))))
(build-system python-build-system)
(arguments
`(#:phases
@@ -555,7 +555,7 @@ netcat implementation that supports TLS.")
(uri (pypi-uri name version))
(sha256
(base32
- "1cyb3lhxrw7ghyhrl2wc95vqhdaxz6n4pai66c573gcly7c7sc7f"))))
+ "1d9abvlwi2d4d991dakds7jyrzxcsqkl13sd0clkriav9cdqwhv4"))))
(build-system python-build-system)
(arguments
`(,@(substitute-keyword-arguments (package-arguments python-acme)
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index 15e1e2caeb..fa5cdfdd78 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -1062,7 +1062,7 @@ SVCD, DVD, 3ivx, DivX 3/4/5, WMV and H.264 movies.")
("waf" ,python-waf)
("wayland" ,wayland)
("wayland-protocols" ,wayland-protocols)
- ("libxkbcommon", libxkbcommon)
+ ("libxkbcommon" ,libxkbcommon)
("youtube-dl" ,youtube-dl)
("zlib" ,zlib)))
(arguments
@@ -1158,7 +1158,7 @@ access to mpv's powerful playback capabilities.")
(define-public youtube-dl
(package
(name "youtube-dl")
- (version "2018.03.10")
+ (version "2018.03.14")
(source (origin
(method url-fetch)
(uri (string-append "https://yt-dl.org/downloads/"
@@ -1166,7 +1166,7 @@ access to mpv's powerful playback capabilities.")
version ".tar.gz"))
(sha256
(base32
- "1ibmz91anli1vzkgw2i3h4wf1i8arzd74730ylwcwyg3375xryjb"))))
+ "0j8j797gqc29fd5ra3cjvwkp8dgvigdydsj0zzjs05zccfqrj9lh"))))
(build-system python-build-system)
(arguments
;; The problem here is that the directory for the man page and completion
@@ -2463,7 +2463,7 @@ MPEG-2, MPEG-4, DVD (VOB)...
("libtool" ,libtool)
("pkg-config" ,pkg-config)
("zlib" ,zlib)
- ("libmediainfo", libmediainfo)
+ ("libmediainfo" ,libmediainfo)
("libzen" ,libzen)))
(build-system gnu-build-system)
(arguments
diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm
index 24f7333cd8..55a92eca0d 100644
--- a/gnu/packages/virtualization.scm
+++ b/gnu/packages/virtualization.scm
@@ -747,7 +747,7 @@ Machine Protocol.")
("sdl2" ,sdl2)
("sdl2-ttf" ,sdl2-ttf)
("spice-protocol" ,spice-protocol)))
- (native-inputs `(("pkg-config", pkg-config)))
+ (native-inputs `(("pkg-config" ,pkg-config)))
(arguments
`(#:tests? #f ;; No tests are available.
#:phases (modify-phases %standard-phases
diff --git a/gnu/packages/vulkan.scm b/gnu/packages/vulkan.scm
index 478de6a444..12b1f93015 100644
--- a/gnu/packages/vulkan.scm
+++ b/gnu/packages/vulkan.scm
@@ -1,5 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2017, 2018 Rutger Helling <rhelling@mykolab.com>
+;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018 Efraim Flashner <efraim@flashner.co.il>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -102,7 +104,7 @@ and for the GLSL.std.450 extended instruction set.
(assoc-ref %build-inputs
"spirv-headers")))))
(inputs `(("spirv-headers" ,spirv-headers)))
- (native-inputs `(("pkg-config", pkg-config)
+ (native-inputs `(("pkg-config" ,pkg-config)
("python" ,python)))
(home-page "https://github.com/KhronosGroup/SPIRV-Tools")
(synopsis "API and commands for processing SPIR-V modules")
@@ -189,7 +191,7 @@ interpretation of the specifications for these languages.")
("mesa" ,mesa)
("spirv-tools" ,spirv-tools)
("wayland" ,wayland)))
- (native-inputs `(("pkg-config", pkg-config)
+ (native-inputs `(("pkg-config" ,pkg-config)
("python" ,python)))
(home-page
"https://github.com/KhronosGroup/Vulkan-LoaderAndValidationLayers")
@@ -210,74 +212,68 @@ and the ICD.")
(let ((commit "773ec22d49f40b7161820f29d953be4a7e40190d")
(revision "1"))
(package
- (name "shaderc")
- (version (string-append "0.0-" revision "." (string-take commit 9)))
- (source
- (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/google/shaderc")
- (commit commit)))
- (file-name (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "0b41inb1czxv3mciip0lfdxv19ccx2ys31fivfywjn2q8va1gd1f"))))
- (build-system meson-build-system)
- (arguments
- `(#:tests? #f ;; Tests don't work yet.
- #:phases
- (modify-phases %standard-phases
- (replace 'configure
- (lambda* (#:key outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- ;; Remove various lines and touch build-version.inc or
- ;; configuring won't work.
- (invoke "touch" "glslc/src/build-version.inc")
- (substitute* "CMakeLists.txt" (("..PYTHON_EXE..*") ""))
- (substitute* "CMakeLists.txt"
- ((".*update_build_version.py..*") ""))
- (substitute* "CMakeLists.txt"
- ((".*add_custom_target.build-version.*") ""))
- (substitute* "CMakeLists.txt"
- ((".*spirv-tools_SOURCE_DIR.*glslang_SOURCE_DIR.*")
- ""))
- (substitute* "CMakeLists.txt"
- ((".*Update build-version.inc.*") ""))
- (substitute* "CMakeLists.txt" ((".*--check.*") ""))
- (substitute* "glslc/src/main.cc" ((".*build-version.inc.*")
- "\"1\""))
- (invoke "cmake" "-GNinja" "-DCMAKE_BUILD_TYPE=Release"
- "-DSHADERC_SKIP_TESTS=ON"
- "-DCMAKE_INSTALL_LIBDIR=lib"
- (string-append "-DCMAKE_INSTALL_PREFIX="
- out)))))
- (add-after 'unpack 'unpack-sources
- (lambda* (#:key inputs #:allow-other-keys)
- (let ((spirv-tools-source (assoc-ref %build-inputs
- "spirv-tools-source"))
- (spirv-headers-source (assoc-ref %build-inputs
- "spirv-headers-source"))
- (glslang-source (assoc-ref %build-inputs
- "glslang-source")))
- (mkdir-p "third-party/spirv-tools")
- (copy-recursively spirv-tools-source
- "third_party/spirv-tools")
- (mkdir-p "third-party/spirv-tools/external/spirv-headers")
- (copy-recursively spirv-headers-source
- (string-append "third_party/spirv-tools"
- "/external/spirv-headers"))
- (mkdir-p "third-party/glslang")
- (copy-recursively glslang-source
- "third_party/glslang")
- #t))))))
- (inputs `(("python" ,python)))
- (native-inputs `(("cmake" ,cmake)
- ("glslang-source", (package-source glslang))
- ("pkg-config", pkg-config)
- ("spirv-headers-source", (package-source spirv-headers))
- ("spirv-tools-source", (package-source spirv-tools))))
- (home-page "https://github.com/google/shaderc")
- (synopsis "Tools for shader compilation")
- (description "Shaderc is a collection of tools, libraries and tests for
+ (name "shaderc")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/google/shaderc")
+ (commit commit)))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0b41inb1czxv3mciip0lfdxv19ccx2ys31fivfywjn2q8va1gd1f"))))
+ (build-system meson-build-system)
+ (arguments
+ `(#:tests? #f ; tests don't work yet.
+ #:phases
+ (modify-phases %standard-phases
+ (replace 'configure
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out")))
+ ;; Remove various lines and touch build-version.inc or
+ ;; configuring won't work.
+ (invoke "touch" "glslc/src/build-version.inc")
+ (substitute* "CMakeLists.txt" (("..PYTHON_EXE..*") ""))
+ (substitute* "CMakeLists.txt"
+ ((".*update_build_version.py..*") ""))
+ (substitute* "CMakeLists.txt"
+ ((".*add_custom_target.build-version.*") ""))
+ (substitute* "CMakeLists.txt"
+ ((".*spirv-tools_SOURCE_DIR.*glslang_SOURCE_DIR.*")
+ ""))
+ (substitute* "CMakeLists.txt"
+ ((".*Update build-version.inc.*") ""))
+ (substitute* "CMakeLists.txt" ((".*--check.*") ""))
+ (substitute* "glslc/src/main.cc" ((".*build-version.inc.*")
+ "\"1\""))
+ (invoke "cmake" "-GNinja" "-DCMAKE_BUILD_TYPE=Release"
+ "-DSHADERC_SKIP_TESTS=ON"
+ "-DCMAKE_INSTALL_LIBDIR=lib"
+ (string-append "-DCMAKE_INSTALL_PREFIX="
+ out)))))
+ (add-after 'unpack 'unpack-sources
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((spirv-tools-source (assoc-ref inputs "spirv-tools-source"))
+ (spirv-headers-source (assoc-ref inputs "spirv-headers-source"))
+ (glslang-source (assoc-ref inputs "glslang-source")))
+ (copy-recursively spirv-tools-source "third_party/spirv-tools")
+ (copy-recursively spirv-headers-source
+ (string-append "third_party/spirv-tools"
+ "/external/spirv-headers"))
+ (copy-recursively glslang-source "third_party/glslang")
+ #t))))))
+ (inputs
+ `(("python" ,python)))
+ (native-inputs
+ `(("cmake" ,cmake)
+ ("glslang-source" ,(package-source glslang))
+ ("pkg-config" ,pkg-config)
+ ("spirv-headers-source" ,(package-source spirv-headers))
+ ("spirv-tools-source" ,(package-source spirv-tools))))
+ (home-page "https://github.com/google/shaderc")
+ (synopsis "Tools for shader compilation")
+ (description "Shaderc is a collection of tools, libraries, and tests for
shader compilation.")
- (license license:asl2.0))))
+ (license license:asl2.0))))
diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm
index a02ee5a64d..6cfe8fb1e9 100644
--- a/gnu/packages/web.scm
+++ b/gnu/packages/web.scm
@@ -957,9 +957,9 @@ of people.")
; named 'stubout'". The tests can be run by replacing the check phase with
; the command "python setup.py nosetests --verbosity=3".
(native-inputs `(; Required for tests:
- ("python-mox3", python-mox3)
- ("python-nose", python-nose)))
- (propagated-inputs `(("python-numpy", python-numpy)))
+ ("python-mox3" ,python-mox3)
+ ("python-nose" ,python-nose)))
+ (propagated-inputs `(("python-numpy" ,python-numpy)))
(home-page "https://github.com/novnc/websockify")
(synopsis "WebSockets support for any application/server")
(description "Websockify translates WebSockets traffic to normal socket
@@ -986,7 +986,7 @@ directions.")
#:tests? #f)) ; no test target
(native-inputs `(("flex" ,flex)))
(inputs `(("gnutls" ,gnutls)
- ("libcrypt", libgcrypt)))
+ ("libcrypt" ,libgcrypt)))
(home-page "https://www.gedanken.org.uk/software/wwwoffle/")
(synopsis "Caching web proxy optimized for intermittent internet links")
(description "WWWOFFLE is a proxy web server that is especially good for
@@ -4048,14 +4048,14 @@ a pure C99 library.")
(define-public uwsgi
(package
(name "uwsgi")
- (version "2.0.15")
+ (version "2.0.17")
(source (origin
(method url-fetch)
- (uri (string-append "http://projects.unbit.it/downloads/uwsgi-"
+ (uri (string-append "https://projects.unbit.it/downloads/uwsgi-"
version ".tar.gz"))
(sha256
(base32
- "1zvj28wp3c1hacpd4c6ra5ilwvvfq3l8y6gn8i7mnncpddlzjbjp"))))
+ "1wlbaairsmhp6bx5wv282q9pgh6w7w6yrb8vxjznfaxrinsfkhix"))))
(build-system gnu-build-system)
(outputs '("out" "python"))
(arguments
@@ -4968,10 +4968,10 @@ used to start services with both privileged and non-privileged port numbers.")
"0n29wcgw32rhnraj9j21ibhwi0xagmmcskhbaz8ihxly7nx3p9h8"))))
(build-system cmake-build-system)
(outputs '("out"
- "static")) ; 1.0MiB of .a files
+ "static")) ; 1.0MiB of .a files
(arguments
- `(#:tests? #f ; No tests available
- #:configure-flags (list "-DCMAKE_BUILD_TYPE=Release")
+ `(#:tests? #f ; no tests available
+ #:build-type "Release"
#:phases
(modify-phases %standard-phases
(add-after 'install 'move-static-libraries
diff --git a/gnu/packages/wget.scm b/gnu/packages/wget.scm
index 06668d287b..9331af9a65 100644
--- a/gnu/packages/wget.scm
+++ b/gnu/packages/wget.scm
@@ -152,21 +152,21 @@ online pastebin services.")
(zero? (system* "sh" "./bootstrap"
"--gnulib-srcdir=gnulib"
"--no-git")))))))
- (inputs `(("autoconf", autoconf)
- ("automake", automake)
- ("doxygen", doxygen)
- ("flex", flex)
- ("gettext", gettext-minimal)
- ("gnutls", gnutls/dane)
- ("libiconv", libiconv)
- ("libidn2", libidn2)
- ("libmicrohttpd", libmicrohttpd)
- ("libpsl", libpsl)
- ("libtool", libtool)
- ("pcre2", pcre2)
- ("python", python)))
+ (inputs `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("doxygen" ,doxygen)
+ ("flex" ,flex)
+ ("gettext" ,gettext-minimal)
+ ("gnutls" ,gnutls/dane)
+ ("libiconv" ,libiconv)
+ ("libidn2" ,libidn2)
+ ("libmicrohttpd" ,libmicrohttpd)
+ ("libpsl" ,libpsl)
+ ("libtool" ,libtool)
+ ("pcre2" ,pcre2)
+ ("python" ,python)))
;; TODO: Add libbrotlidec, libnghttp2.
- (native-inputs `(("pkg-config", pkg-config)))
+ (native-inputs `(("pkg-config" ,pkg-config)))
(home-page "https://gitlab.com/gnuwget/wget2")
(synopsis "Successor of GNU Wget")
(description "GNU Wget2 is the successor of GNU Wget, a file and recursive
diff --git a/gnu/packages/wine.scm b/gnu/packages/wine.scm
index 0327deaf24..8496eb3365 100644
--- a/gnu/packages/wine.scm
+++ b/gnu/packages/wine.scm
@@ -221,7 +221,7 @@ integrate Windows applications into your desktop.")
(define-public wine-staging-patchset-data
(package
(name "wine-staging-patchset-data")
- (version "3.3")
+ (version "3.4")
(source
(origin
(method url-fetch)
@@ -230,7 +230,7 @@ integrate Windows applications into your desktop.")
(file-name (string-append name "-" version ".zip"))
(sha256
(base32
- "16l28vrhqn27kipqwms622jz1prfky8qkjb8pj747k3qjnm2k1g9"))))
+ "00yzh9bqs2rjgvk78xv3gfkbv4f2bkch9vb1ii4xh883f7wvkz93"))))
(build-system trivial-build-system)
(native-inputs
`(("bash" ,bash)
@@ -270,15 +270,16 @@ integrate Windows applications into your desktop.")
(source (origin
(method url-fetch)
(uri (string-append
- "https://dl.winehq.org/wine/source/3.x/wine-" version
- ".tar.xz"))
+ "https://dl.winehq.org/wine/source/"
+ (version-major version) ".x"
+ "/wine-" version ".tar.xz"))
(file-name (string-append name "-" version ".tar.xz"))
(sha256
(base32
- "0cx31jsll7mxd9r7v0vpahajqwb6da6cpwybv06l5ydkgfrbv505"))))
+ "14wf7536rkmhav9ibbvhqqkfqmbk1dckhd2679i5scizr5x290x4"))))
(inputs `(("autoconf" ,autoconf) ; for autoreconf
- ("gtk+", gtk+)
- ("libva", libva)
+ ("gtk+" ,gtk+)
+ ("libva" ,libva)
("python" ,python)
("sdl2" ,sdl2)
("util-linux" ,util-linux) ; for hexdump
diff --git a/gnu/packages/wm.scm b/gnu/packages/wm.scm
index b16ef29ea5..97d5d577d3 100644
--- a/gnu/packages/wm.scm
+++ b/gnu/packages/wm.scm
@@ -706,7 +706,7 @@ experience.")
("libxdg-basedir" ,libxdg-basedir)
("libxkbcommon" ,libxkbcommon)
("lua" ,lua)
- ("lua-lgi",lua-lgi)
+ ("lua-lgi" ,lua-lgi)
("pango" ,pango)
("startup-notification" ,startup-notification)
("xcb-util" ,xcb-util)
diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm
index ceee6fa832..d8899e8c41 100644
--- a/gnu/packages/xdisorg.scm
+++ b/gnu/packages/xdisorg.scm
@@ -1096,7 +1096,7 @@ connectivity of the X server running on a particular @code{DISPLAY}.")
(define-public rofi
(package
(name "rofi")
- (version "1.5.0")
+ (version "1.5.1")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/DaveDavenport/rofi/"
@@ -1104,7 +1104,7 @@ connectivity of the X server running on a particular @code{DISPLAY}.")
version "/rofi-" version ".tar.xz"))
(sha256
(base32
- "0li2hl55sxzdpbxxiwgxsvkhyy6bh8qd2j1r8xh8y6q8a318zsz9"))))
+ "10r1jd3h5i22pdr619hmvxv6dhzf9i13j50c28g7yffdggx8ncjg"))))
(build-system gnu-build-system)
(inputs
`(("pango" ,pango)
@@ -1329,9 +1329,9 @@ XCB util-xrm module provides the following libraries:
(install-file "README" doc)
;; Avoid unspecified return value.
#t))))))
- (inputs `(("libx11", libx11)
- ("libxext", libxext)
- ("libxxf86vm", libxxf86vm)))
+ (inputs `(("libx11" ,libx11)
+ ("libxext" ,libxext)
+ ("libxxf86vm" ,libxxf86vm)))
(synopsis "Tiny monitor calibration loader for XFree86 (or X.org)")
(description "xcalib is a tiny tool to load the content of vcgt-Tags in ICC
profiles to the video card's gamma ramp. It does work with most video card
diff --git a/gnu/packages/xml.scm b/gnu/packages/xml.scm
index 293b47a653..54e969d6d1 100644
--- a/gnu/packages/xml.scm
+++ b/gnu/packages/xml.scm
@@ -560,7 +560,7 @@ callback.")
(define-public perl-xml-simple
(package
(name "perl-xml-simple")
- (version "2.22")
+ (version "2.25")
(source (origin
(method url-fetch)
(uri (string-append
@@ -568,7 +568,7 @@ callback.")
version ".tar.gz"))
(sha256
(base32
- "0jgbk30jizafpl7078jhw1di1yh08gf8d85dsvjllr595vr0widr"))))
+ "1y6vh328zrh085d40852v4ij2l4g0amxykswxd1nfhd2pspds7sk"))))
(build-system perl-build-system)
(propagated-inputs
`(("perl-xml-parser" ,perl-xml-parser)
@@ -707,14 +707,14 @@ a schema.")
(define-public perl-xml-compile-soap
(package
(name "perl-xml-compile-soap")
- (version "3.21")
+ (version "3.24")
(source (origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/M/MA/MARKOV/"
"XML-Compile-SOAP-" version ".tar.gz"))
(sha256
(base32
- "0rxidh7kjyhnw2y789bqbwccnp8n0m3xskn524y9c752s64qpjcz"))))
+ "0pkcph562l2ij7rlwlvm58v6y062qsbydfpaz2qnph2ixqy0xfd1"))))
(build-system perl-build-system)
(propagated-inputs
`(("perl-file-slurp-tiny" ,perl-file-slurp-tiny)
@@ -1309,7 +1309,8 @@ SAX2 APIs.")
version ".zip"))
(sha256
(base32
- "0w19k1awslmihpwsxwjbg89hv0vjhk4k3i0vrfchy3mqknd988y5"))))
+ "0w19k1awslmihpwsxwjbg89hv0vjhk4k3i0vrfchy3mqknd988y5"))
+ (patches (search-patches "java-simple-xml-fix-tests.patch"))))
(build-system ant-build-system)
(arguments
`(#:build-target "build"
@@ -1415,7 +1416,7 @@ characters into a single event.")
(propagated-inputs
`(("perl-libxml" ,perl-libxml)
("perl-xml-filter-buffertext" ,perl-xml-filter-buffertext)
- ("perl-xml-namespacesupport", perl-xml-namespacesupport)
+ ("perl-xml-namespacesupport" ,perl-xml-namespacesupport)
("perl-xml-sax-base" ,perl-xml-sax-base)))
(home-page "http://search.cpan.org/dist/XML-SAX-Writer/")
(synopsis "SAX2 XML Writer")
@@ -1472,7 +1473,7 @@ It provides a flexible escaping technique and pretty printing.")
("perl-xml-sax-writer" ,perl-xml-sax-writer)
("perl-xml-simple" ,perl-xml-simple)
("perl-xml-xpathengine" ,perl-xml-xpathengine)
- ("perl-test-pod", perl-test-pod)
+ ("perl-test-pod" ,perl-test-pod)
("perl-tree-xpathengine" ,perl-tree-xpathengine)))
(home-page "http://search.cpan.org/dist/XML-Twig/")
(synopsis "Perl module for processing huge XML documents in tree mode")
diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm
index e2cfef3a94..0dbc36282e 100644
--- a/gnu/packages/xorg.scm
+++ b/gnu/packages/xorg.scm
@@ -5932,7 +5932,7 @@ basic eye-candy effects.")
("python2-rencode" ,python2-rencode)
("xorg-server" ,xorg-server)))
(native-inputs `(("pkg-config" ,pkg-config)
- ("python2-cython", python2-cython)))
+ ("python2-cython" ,python2-cython)))
(arguments
`(#:python ,python-2 ;; no full Python 3 support yet
#:configure-flags '("--with-tests"
diff --git a/gnu/services/databases.scm b/gnu/services/databases.scm
index 72927c4534..8ae248ebe4 100644
--- a/gnu/services/databases.scm
+++ b/gnu/services/databases.scm
@@ -112,7 +112,7 @@ host all all ::1/128 trust"))
(match file
(($ <postgresql-config-file> log-destination hba-file
ident-file extra-config)
- (define (quote' string)
+ (define (single-quote string)
(if string
(list "'" string "'")
'()))
@@ -124,9 +124,9 @@ host all all ::1/128 trust"))
((key . #f) '())
((key values ...) `(,key " = " ,@values "\n")))
- `(("log_destination" ,@(quote' log-destination))
- ("hba_file" ,@(quote' hba-file))
- ("ident_file" ,@(quote' ident-file))
+ `(("log_destination" ,@(single-quote log-destination))
+ ("hba_file" ,@(single-quote hba-file))
+ ("ident_file" ,@(single-quote ident-file))
,@extra-config)))
(gexp->derivation
diff --git a/gnu/services/mcron.scm b/gnu/services/mcron.scm
index b6cb8bc726..5bee02a587 100644
--- a/gnu/services/mcron.scm
+++ b/gnu/services/mcron.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2016, 2017 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -20,7 +20,7 @@
#:use-module (gnu services)
#:use-module (gnu services base)
#:use-module (gnu services shepherd)
- #:autoload (gnu packages guile) (mcron2)
+ #:autoload (gnu packages guile) (mcron)
#:use-module (guix records)
#:use-module (guix gexp)
#:use-module (srfi srfi-1)
@@ -53,7 +53,7 @@
make-mcron-configuration
mcron-configuration?
(mcron mcron-configuration-mcron ;package
- (default mcron2))
+ (default mcron))
(jobs mcron-configuration-jobs ;list of <mcron-job>
(default '())))
@@ -100,7 +100,7 @@
jobs)))))
(default-value (mcron-configuration)))) ;empty job list
-(define* (mcron-service jobs #:optional (mcron mcron2))
+(define* (mcron-service jobs #:optional (mcron mcron))
"Return an mcron service running @var{mcron} that schedules @var{jobs}, a
list of gexps denoting mcron job specifications.
diff --git a/gnu/services/ssh.scm b/gnu/services/ssh.scm
index 301ba74041..f1d2be3f6b 100644
--- a/gnu/services/ssh.scm
+++ b/gnu/services/ssh.scm
@@ -302,6 +302,10 @@ The other options should be self-descriptive."
(subsystems openssh-configuration-subsystems
(default '(("sftp" "internal-sftp"))))
+ ;; list of strings
+ (accepted-environment openssh-configuration-accepted-environment
+ (default '()))
+
;; list of user-name/file-like tuples
(authorized-keys openssh-authorized-keys
(default '()))
@@ -430,6 +434,9 @@ of user-name/file-like tuples."
(format port "AuthorizedKeysFile \
.ssh/authorized_keys .ssh/authorized_keys2 /etc/ssh/authorized_keys.d/%u\n")
+ (for-each (lambda (s) (format port "AcceptEnv ~a\n" s))
+ '#$(openssh-configuration-accepted-environment config))
+
(for-each
(match-lambda
((name command) (format port "Subsystem\t~a\t~a\n" name command)))
diff --git a/gnu/system/vm.scm b/gnu/system/vm.scm
index ae8780d2e1..594ba66ff4 100644
--- a/gnu/system/vm.scm
+++ b/gnu/system/vm.scm
@@ -144,6 +144,7 @@ made available under the /xchg CIFS share."
(initrd (if initrd ; use the default initrd?
(return initrd)
(base-initrd %linux-vm-file-systems
+ #:on-error 'backtrace
#:linux linux
#:linux-modules %base-initrd-modules
#:qemu-networking? #t))))
diff --git a/gnu/tests/base.scm b/gnu/tests/base.scm
index 378c7ff021..63d2789cc5 100644
--- a/gnu/tests/base.scm
+++ b/gnu/tests/base.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2016, 2017 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2016, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -477,7 +477,7 @@ in a loop. See <http://bugs.gnu.org/26931>.")
(define %mcron-os
;; System with an mcron service, with one mcron job for "root" and one mcron
- ;; job for an unprivileged user (note: #:user is an 'mcron2' thing.)
+ ;; job for an unprivileged user.
(let ((job1 #~(job next-second-from
(lambda ()
(call-with-output-file "witness"