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authorRicardo Wurmus <rekado@elephly.net>2018-03-07 18:52:18 +0100
committerRicardo Wurmus <rekado@elephly.net>2018-03-07 22:18:38 +0100
commitb2dc4cb41ce107199c8899b89e1c4104d410370b (patch)
treeed5c9a770c11f6535f8582bf9cd2d9f5bcc8a58f /gnu
parent12ff7f3fc77ce6a7a3d7be9555e602be3c63704d (diff)
downloadguix-b2dc4cb41ce107199c8899b89e1c4104d410370b.tar
guix-b2dc4cb41ce107199c8899b89e1c4104d410370b.tar.gz
gnu: Add r-cgdsr.
* gnu/packages/cran.scm (r-cgdsr): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/cran.scm23
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index b5471d703b..7281caf7a6 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -2779,3 +2779,26 @@ of the matrix are ordered to highlight patterns and are often accompanied by
dendrograms.")
;; Either version of the license.
(license (list license:gpl2 license:gpl3))))
+
+(define-public r-cgdsr
+ (package
+ (name "r-cgdsr")
+ (version "1.2.10")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "cgdsr" version))
+ (sha256
+ (base32
+ "1xyhw7mhmjichr1l6f9y1qvfj9wm87kfbm87ji7lcwf36gxh5g23"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-r-methodss3" ,r-r-methodss3)
+ ("r-r-oo" ,r-r-oo)))
+ (home-page "https://github.com/cBioPortal/cgdsr")
+ (synopsis "R-based API for accessing the MSKCC Cancer Genomics Data Server")
+ (description
+ "This package provides a basic set of R functions for querying the Cancer
+Genomics Data Server (CGDS), hosted by the Computational Biology Center at
+Memorial-Sloan-Kettering Cancer Center (MSKCC).")
+ (license license:lgpl3)))