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authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2018-08-20 20:00:18 +0200
committerRicardo Wurmus <rekado@elephly.net>2018-08-29 17:06:13 +0200
commit22b770ce0003b7d6fe98299292f8f5c0569f0712 (patch)
treee6f56c7ef300e413a218fcdfc708248d011444e4 /gnu
parentd8b8eb3ff5453676ffd5251f17424dad5e9966e8 (diff)
downloadguix-22b770ce0003b7d6fe98299292f8f5c0569f0712.tar
guix-22b770ce0003b7d6fe98299292f8f5c0569f0712.tar.gz
gnu: Add python-anndata.
* gnu/packages/python.scm (python-anndata): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/python.scm26
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index 7575ab1859..f59e24d5ff 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -13979,3 +13979,29 @@ Numba works by generating optimized machine code using the LLVM compiler
infrastructure at import time, runtime, or statically (using the included pycc
tool).")
(license license:bsd-3)))
+
+(define-public python-anndata
+ (package
+ (name "python-anndata")
+ (version "0.6.9")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "anndata" version))
+ (sha256
+ (base32
+ "1fh461xyyc7pcrjfgd013bdc2alf53r46ss3gfw3431mbb1gappi"))))
+ (build-system python-build-system)
+ (propagated-inputs
+ `(("python-h5py" ,python-h5py)
+ ("python-natsort" ,python-natsort)
+ ("python-pandas" ,python-pandas)
+ ("python-scipy" ,python-scipy)))
+ (home-page "https://github.com/theislab/anndata")
+ (synopsis "Annotated data for data analysis pipelines")
+ (description "Anndata is a package for simple (functional) high-level APIs
+for data analysis pipelines. In this context, it provides an efficient,
+scalable way of keeping track of data together with learned annotations and
+reduces the code overhead typically encountered when using a mostly
+object-oriented library such as @code{scikit-learn}.")
+ (license license:bsd-3)))