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authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2018-09-24 13:23:32 +0200
committerRicardo Wurmus <rekado@elephly.net>2018-09-24 13:31:20 +0200
commita434730f2ebc39fcda7a8d0709c7f5adffa69299 (patch)
treeb9c678b363b99c63e27f87e0b32be827793417c1 /gnu
parent5c8031ff7382ec9079040d08ae5a05b4dd2352b7 (diff)
downloadguix-a434730f2ebc39fcda7a8d0709c7f5adffa69299.tar
guix-a434730f2ebc39fcda7a8d0709c7f5adffa69299.tar.gz
gnu: Add r-xbioc.
* gnu/packages/bioinformatics.scm (r-xbioc): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioinformatics.scm33
1 files changed, 33 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b619866ba3..d92fbd7de9 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -13760,3 +13760,36 @@ sequencing data.")
;; This is free software but the license variant is unclear:
;; <https://github.com/mw55309/poRe_docs/issues/10>.
(license license:bsd-3)))
+
+(define-public r-xbioc
+ (let ((revision "1")
+ (commit "f798c187e376fd1ba27abd559f47bbae7e3e466b"))
+ (package
+ (name "r-xbioc")
+ (version (git-version "0.1.15" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/renozao/xbioc.git")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "03hffh2f6z71y6l6dqpa5cql3hdaw7zigdi8sm2dzgx379k9rgrr"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotationdbi" ,r-annotationdbi)
+ ("r-assertthat" ,r-assertthat)
+ ("r-biobase" ,r-biobase)
+ ("r-biocinstaller" ,r-biocinstaller)
+ ("r-digest" ,r-digest)
+ ("r-pkgmaker" ,r-pkgmaker)
+ ("r-plyr" ,r-plyr)
+ ("r-reshape2" ,r-reshape2)
+ ("r-stringr" ,r-stringr)))
+ (home-page "https://github.com/renozao/xbioc/")
+ (synopsis "Extra base functions for Bioconductor")
+ (description "This package provides extra utility functions to perform
+common tasks in the analysis of omics data, leveraging and enhancing features
+provided by Bioconductor packages.")
+ (license license:gpl3+))))