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authorRicardo Wurmus <rekado@elephly.net>2019-03-13 09:34:39 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-03-13 13:17:51 +0100
commit2cb71d81a47279db14e441eb37cad022c03535e7 (patch)
treef0f5836eed7ba0b62b475a95d7513e38c5b76203 /gnu
parent3087a2f37b5588deac54351fe4f240160b5d57b7 (diff)
downloadguix-2cb71d81a47279db14e441eb37cad022c03535e7.tar
guix-2cb71d81a47279db14e441eb37cad022c03535e7.tar.gz
gnu: Add r-lpsymphony.
* gnu/packages/bioconductor.scm (r-lpsymphony): New variable.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm31
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 899b06aa34..a08ad46110 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -30,6 +30,7 @@
#:use-module (gnu packages gcc)
#:use-module (gnu packages graph)
#:use-module (gnu packages maths)
+ #:use-module (gnu packages pkg-config)
#:use-module (gnu packages statistics)
#:use-module (gnu packages web))
@@ -1837,3 +1838,33 @@ and regression inferences from RNA-sequencing data.")
"This package provides tools for differential expression analysis at both
gene and isoform level using RNA-seq data")
(license license:artistic2.0)))
+
+(define-public r-lpsymphony
+ (package
+ (name "r-lpsymphony")
+ (version "1.10.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "lpsymphony" version))
+ (sha256
+ (base32
+ "0vnsf5x6gvd1k8h89al7r6xbgbxsjbxphr675czzwggz79zbvq7y"))))
+ (build-system r-build-system)
+ (inputs
+ `(("gfortran" ,gfortran)
+ ("zlib" ,zlib)))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)))
+ (home-page "http://r-forge.r-project.org/projects/rsymphony")
+ (synopsis "Symphony integer linear programming solver in R")
+ (description
+ "This package was derived from Rsymphony. The package provides an R
+interface to SYMPHONY, a linear programming solver written in C++. The main
+difference between this package and Rsymphony is that it includes the solver
+source code, while Rsymphony expects to find header and library files on the
+users' system. Thus the intention of @code{lpsymphony} is to provide an easy
+to install interface to SYMPHONY.")
+ ;; Symphony 5.4 or later is distributed under the terms of the EPL 1.0.
+ ;; lpsimphony is released under the same terms.
+ (license license:epl1.0)))