diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-24 23:41:19 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-24 23:44:13 +0100 |
| commit | 3d2bc817517d9ff69e3eb255d078dad76305bedd (patch) | |
| tree | 9e8bad527cfde51f7c66bed1857d33bea104d3bc /gnu | |
| parent | 91c1fbdfdd2b18ae3c77c150d558c7947276d59e (diff) | |
| download | guix-3d2bc817517d9ff69e3eb255d078dad76305bedd.tar guix-3d2bc817517d9ff69e3eb255d078dad76305bedd.tar.gz | |
gnu: Add r-pegas.
* gnu/packages/cran.scm (r-pegas): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/cran.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index b1466dc27b..7273989e49 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -12305,3 +12305,29 @@ statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.") (license license:gpl2+))) + +(define-public r-pegas + (package + (name "r-pegas") + (version "0.11") + (source + (origin + (method url-fetch) + (uri (cran-uri "pegas" version)) + (sha256 + (base32 + "0l21bapzbjcvblbvks3jh9rpy9hng1ccd7f0glhqw695lc737bpx")))) + (build-system r-build-system) + (propagated-inputs + `(("r-adegenet" ,r-adegenet) + ("r-ape" ,r-ape))) + (home-page "http://ape-package.ird.fr/pegas.html") + (synopsis "Population and evolutionary genetics analysis system") + (description + "This package provides functions for reading, writing, plotting, +analysing, and manipulating allelic and haplotypic data, including from VCF +files, and for the analysis of population nucleotide sequences and +micro-satellites including coalescent analyses, linkage disequilibrium, +population structure (Fst, Amova) and equilibrium (HWE), haplotype networks, +minimum spanning tree and network, and median-joining networks.") + (license license:gpl2+))) |