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authorTobias Geerinckx-Rice <me@tobias.gr>2016-12-19 21:13:53 +0100
committerTobias Geerinckx-Rice <me@tobias.gr>2016-12-20 05:36:55 +0100
commit33d5b2464deffc24473ff6542f6731deaba8faba (patch)
tree3324c19631a8a688a19d3823114bbe28db6fbdea /gnu/packages
parent2fb5af2c2ba9087abc4cc53652cd02c2c0cd49bb (diff)
downloadguix-33d5b2464deffc24473ff6542f6731deaba8faba.tar
guix-33d5b2464deffc24473ff6542f6731deaba8faba.tar.gz
gnu: cutadapt: Use ‘modify-phases’ syntax.
* gnu/packages/bioinformatics.scm (cutadapt)[arguments]: Use ‘modify-phases’.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioinformatics.scm29
1 files changed, 15 insertions, 14 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index f363936421..912941e113 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1816,20 +1816,21 @@ preparation protocols.")
"19smhh6444ikn4jlmyhvffw4m5aw7yg07rqsk7arg8dkwyga1i4v"))))
(build-system python-build-system)
(arguments
- ;; tests must be run after install
- `(#:phases (alist-cons-after
- 'install 'check
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (setenv "PYTHONPATH"
- (string-append
- (getenv "PYTHONPATH")
- ":" (assoc-ref outputs "out")
- "/lib/python"
- (string-take (string-take-right
- (assoc-ref inputs "python") 5) 3)
- "/site-packages"))
- (zero? (system* "nosetests" "-P" "tests")))
- (alist-delete 'check %standard-phases))))
+ `(#:phases
+ (modify-phases %standard-phases
+ ;; The tests must be run after installation.
+ (delete 'check)
+ (add-after 'install 'check
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (setenv "PYTHONPATH"
+ (string-append
+ (getenv "PYTHONPATH")
+ ":" (assoc-ref outputs "out")
+ "/lib/python"
+ (string-take (string-take-right
+ (assoc-ref inputs "python") 5) 3)
+ "/site-packages"))
+ (zero? (system* "nosetests" "-P" "tests")))))))
(inputs
`(("python-xopen" ,python-xopen)))
(native-inputs