aboutsummaryrefslogtreecommitdiff
path: root/gnu/packages
diff options
context:
space:
mode:
authorRicardo Wurmus <rekado@elephly.net>2017-11-06 21:41:40 +0100
committerRicardo Wurmus <rekado@elephly.net>2017-11-07 08:15:37 +0100
commite127c918f857483c28d2a00d7dc78ac887e2d61a (patch)
tree16c2984da816bf77275cde14ec691910fceddf18 /gnu/packages
parente6ce4bf00d8597056f3de91fc1eb0fee2b8ec408 (diff)
downloadguix-e127c918f857483c28d2a00d7dc78ac887e2d61a.tar
guix-e127c918f857483c28d2a00d7dc78ac887e2d61a.tar.gz
gnu: r-genomation: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.10.0. [propagated-inputs]: Remove r-rhtslib. [inputs]: Remove zlib.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioinformatics.scm7
1 files changed, 2 insertions, 5 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 1ab5f9864a..2a8cbf6fba 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7423,13 +7423,13 @@ reference point and sorted by a user defined feature.")
(define-public r-genomation
(package
(name "r-genomation")
- (version "1.8.0")
+ (version "1.10.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "genomation" version))
(sha256
(base32
- "0r71nf8p3aq3yffqxg4yir1zmm7rar5a57nmy1kpqpn8kaf2svjl"))))
+ "1ddd8c9w1f1i1ga9rpbwiic8rsaws1chdxx4j38bpyaiy4zhz1ca"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biostrings" ,r-biostrings)
@@ -7448,14 +7448,11 @@ reference point and sorted by a user defined feature.")
("r-rcpp" ,r-rcpp)
("r-readr" ,r-readr)
("r-reshape2" ,r-reshape2)
- ("r-rhtslib" ,r-rhtslib)
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
("r-runit" ,r-runit)
("r-s4vectors" ,r-s4vectors)
("r-seqpattern" ,r-seqpattern)))
- (inputs
- `(("zlib" ,zlib)))
(home-page "http://bioinformatics.mdc-berlin.de/genomation/")
(synopsis "Summary, annotation and visualization of genomic data")
(description