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authorBen Woodcroft <donttrustben@gmail.com>2018-03-04 10:32:56 +1000
committerBen Woodcroft <donttrustben@gmail.com>2018-03-30 12:18:35 +1000
commitf38ac742e6f542110cf838646a35c325201def51 (patch)
tree822d0107ebe240ccbffa47cf6c0a7320ca2000aa /gnu/packages
parentc7a8aa131dc02b0020309b0bcc0c92d3811f8c8b (diff)
downloadguix-f38ac742e6f542110cf838646a35c325201def51.tar
guix-f38ac742e6f542110cf838646a35c325201def51.tar.gz
gnu: mash: Update to 2.0.
* gnu/packages/bioinformatics.scm (mash): Update to 2.0.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioinformatics.scm8
1 files changed, 5 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index cf36b3642f..af515c026e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3775,7 +3775,7 @@ sequences).")
(define-public mash
(package
(name "mash")
- (version "1.1.1")
+ (version "2.0")
(source (origin
(method url-fetch)
(uri (string-append
@@ -3784,7 +3784,7 @@ sequences).")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "08znbvqq5xknfhmpp3wcj574zvi4p7i8zifi67c9qw9a6ikp42fj"))
+ "00fx14vpmgsijwxd1xql3if934l82v8ckqgjjyyhnr36qb9qrskv"))
(modules '((guix build utils)))
(snippet
;; Delete bundled kseq.
@@ -3802,7 +3802,9 @@ sequences).")
(modify-phases %standard-phases
(add-after 'unpack 'fix-includes
(lambda _
- (substitute* '("src/mash/Sketch.cpp" "src/mash/CommandFind.cpp")
+ (substitute* '("src/mash/Sketch.cpp"
+ "src/mash/CommandFind.cpp"
+ "src/mash/CommandScreen.cpp")
(("^#include \"kseq\\.h\"")
"#include \"htslib/kseq.h\""))
#t))