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| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2023-01-17 14:18:23 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-01-22 09:16:18 +0100 |
| commit | ac32f93df36f1908c3d90c28704e3b2bf9c91c36 (patch) | |
| tree | bad6b910965f8b1709140b29cd775296df7f2f86 /gnu/packages | |
| parent | 452039f35ebb7cb2db8d3bb706d06743442e11c3 (diff) | |
| download | guix-ac32f93df36f1908c3d90c28704e3b2bf9c91c36.tar guix-ac32f93df36f1908c3d90c28704e3b2bf9c91c36.tar.gz | |
gnu: Add r-anvil.
* gnu/packages/bioconductor.scm (r-anvil): New variable.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 41 |
1 files changed, 41 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 420940ff21..711b988e7f 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2464,6 +2464,47 @@ Powerful interactive and dynamic figures generated by animalcules enable users to understand their data better and discover new insights.") (license license:artistic2.0))) +(define-public r-anvil + (package + (name "r-anvil") + (version "1.10.1") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "AnVIL" version)) + (sha256 + (base32 + "0iqsffkrxv28g9cddx2w05f2dbscwxhh6bpizwa8xaxhvn5bcpsv")))) + (properties `((upstream-name . "AnVIL"))) + (build-system r-build-system) + (propagated-inputs + (list r-biocmanager + r-dplyr + r-dt + r-futile-logger + r-htmltools + r-httr + r-jsonlite + r-miniui + r-rapiclient + r-rlang + r-shiny + r-tibble + r-tidyr + r-tidyselect)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/AnVIL") + (synopsis "Provides access to AnVIL, Terra, Leonardo and other projects") + (description + "The AnVIL is a cloud computing resource developed in part by the +National Human Genome Research Institute. The AnVIL package provides end-user +and developer functionality. AnVIL provides fast binary package installation, +utilities for working with Terra/AnVIL table and data resources, and +convenient functions for file movement to and from Google cloud storage. For +developers, AnVIL provides programatic access to the Terra, Leonardo, Rawls, +Dockstore, and Gen3 RESTful programming interface, including helper functions +to transform JSON responses to formats more amenable to manipulation in R.") + (license license:artistic2.0))) + (define-public r-aldex2 (package (name "r-aldex2") |