gnu: Use 'modify-phases' syntax.

* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal,
wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use
'modify-phases' syntax.
* gnu/packages/algebra.scm (arb)[arguments]: Likewise.
* gnu/packages/apr.scm (apr-util)[arguments]: Likewise.
* gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano,
lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound,
zita-convolver, zita-alsa-pcmi)[arguments]: Likewise.
* gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express,
flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise.
* gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise.
* gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise.
* gnu/packages/compression.scm (sharutils)[arguments]: Likewise.
* gnu/packages/conky.scm (conky)[arguments]: Likewise.
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise.
* gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise.
* gnu/packages/display-managers.scm (slim)[arguments]: Likewise.
* gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise.
* gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise.
* gnu/packages/engineering.scm (pcb)[arguments]: Likewise.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise.
* gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise.
* gnu/packages/fltk.scm (fltk)[arguments]: Likewise.
* gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise.
* gnu/packages/gd.scm (perl-gd)[arguments]: Likewise.
* gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise.
* gnu/packages/glib.scm (glibmm)[arguments]: Likewise.
* gnu/packages/gl.scm (glew)[arguments]: Likewise.
* gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs,
libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise.
* gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise.
* gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise.
* gnu/packages/graphics.scm (agg)[arguments]: Likewise.
* gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present,
python2-pycairo)[arguments]: Likewise.
* gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise.
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise.
* gnu/packages/hugs.scm (hugs)[arguments]: Likewise.
* gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal)
[arguments]: Likewise.
* gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise.
* gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise.
* gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static,
lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools)
[arguments]: Likewise.
* gnu/packages/lisp.scm (ccl)[arguments]: Likewise.
* gnu/packages/lout.scm (lout)[arguments]: Likewise.
* gnu/packages/lua.scm (luajit)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise.
* gnu/packages/mail.scm (exim)[arguments]: Likewise.
* gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise.
* gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun)
[arguments]: Likewise.
* gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise.
* gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise.
* gnu/packages/music.scm (solfege)[arguments]: Likewise.
* gnu/packages/noweb.scm (noweb)[arguments]: Likewise.
* gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]:
Likewise.
* gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu,
zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise.
* gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]:
Likewise.
* gnu/packages/photo.scm (gphoto2)[arguments]: Likewise.
* gnu/packages/popt.scm (popt)[arguments]: Likewise.
* gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]:
Likewise.
* gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise.
* gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy,
python-sqlalchemy, python-docopt)[arguments]: Likewise.
* gnu/packages/rdf.scm (lrdf)[arguments]: Likewise.
* gnu/packages/regex.scm (tre)[arguments]: Likewise.
* gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise.
* gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise.
* gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise.
* gnu/packages/scheme.scm (racket)[arguments]: Likewise.
* gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise.
* gnu/packages/serveez.scm (serveez)[arguments]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise.
* gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise.
* gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise.
* gnu/packages/tcl.scm (expect)[arguments]: Likewise.
* gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise.
* gnu/packages/textutils.scm (recode, libgtextutils)[arguments]:
Likewise.
* gnu/packages/time.scm (time)[arguments]: Likewise.
* gnu/packages/tor.scm (privoxy)[arguments]: Likewise.
* gnu/packages/uucp.scm (uucp)[arguments]: Likewise.
* gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise.
* gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise.
* gnu/packages/web.scm (tinyproxy)[arguments]: Likewise.
* gnu/packages/wicd.scm (wicd)[arguments]: Likewise.
* gnu/packages/wm.scm (bspwm)[arguments]: Likewise.
* gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise.
* gnu/packages/xfce.scm (xfconf)[arguments]: Likewise.
* gnu/packages/xfig.scm (transfig)[arguments]: Likewise.
* gnu/packages/xorg.scm (imake)[arguments]: Likewise.

1 files changed, 31 insertions, 30 deletions

diff --git a/gnu/packages/pdf.scm b/gnu/packages/pdf.scm
index 1ee4b819f9..98df90e2d4 100644
--- a/gnu/packages/pdf.scm
+++ b/gnu/packages/pdf.scm
@@ -300,19 +300,19 @@ reading and editing of existing PDF files.")
                              (assoc-ref %build-inputs "freetype")
                              "/include/freetype2"))
       #:phases
-       (alist-replace
-        'install
-        (lambda* (#:key outputs inputs #:allow-other-keys #:rest args)
-         (let* ((install (assoc-ref %standard-phases 'install))
-                (out (assoc-ref outputs "out"))
-                (xpdfrc (string-append out "/etc/xpdfrc"))
-                (gs-fonts (assoc-ref inputs "gs-fonts")))
-               (apply install args)
-               (substitute* xpdfrc
+      (modify-phases %standard-phases
+        (replace 'install
+          (lambda* (#:key outputs inputs #:allow-other-keys #:rest args)
+            (let* ((install (assoc-ref %standard-phases 'install))
+                   (out (assoc-ref outputs "out"))
+                   (xpdfrc (string-append out "/etc/xpdfrc"))
+                   (gs-fonts (assoc-ref inputs "gs-fonts")))
+              (apply install args)
+              (substitute* xpdfrc
                 (("/usr/local/share/ghostscript/fonts")
                  (string-append gs-fonts "/share/fonts/type1/ghostscript"))
-                (("#fontFile") "fontFile"))))
-        %standard-phases)))
+                (("#fontFile") "fontFile")))
+            #t)))))
    (synopsis "Viewer for PDF files based on the Motif toolkit")
    (description
     "Xpdf is a viewer for Portable Document Format (PDF) files.")
@@ -343,7 +343,7 @@ reading and editing of existing PDF files.")
                           "CC=gcc")
        #:tests? #f ; Package does not contain tests.
        #:phases
-       (alist-delete 'configure %standard-phases)))
+       (modify-phases %standard-phases (delete 'configure))))
     (home-page "https://pwmt.org/projects/zathura-cb/")
     (synopsis "Comic book support for zathura (libarchive backend)")
     (description "The zathura-cb plugin adds comic book support to zathura
@@ -374,7 +374,7 @@ using libarchive.")
                           "CC=gcc")
        #:tests? #f ; Package does not contain tests.
        #:phases
-       (alist-delete 'configure %standard-phases)))
+       (modify-phases %standard-phases (delete 'configure))))
     (home-page "https://pwmt.org/projects/zathura-ps/")
     (synopsis "PS support for zathura (libspectre backend)")
     (description "The zathura-ps plugin adds PS support to zathura
@@ -406,7 +406,7 @@ using libspectre.")
                           "CC=gcc")
        #:tests? #f ; Package does not contain tests.
        #:phases
-       (alist-delete 'configure %standard-phases)))
+       (modify-phases %standard-phases (delete 'configure))))
     (home-page "https://pwmt.org/projects/zathura-djvu/")
     (synopsis "DjVu support for zathura (DjVuLibre backend)")
     (description "The zathura-djvu plugin adds DjVu support to zathura
@@ -439,7 +439,7 @@ using the DjVuLibre library.")
                           "CC=gcc")
        #:tests? #f ; Package does not include tests.
        #:phases
-       (alist-delete 'configure %standard-phases)))
+       (modify-phases %standard-phases (delete 'configure))))
     (home-page "https://pwmt.org/projects/zathura-pdf-poppler/")
     (synopsis "PDF support for zathura (poppler backend)")
     (description "The zathura-pdf-poppler plugin adds PDF support to zathura
@@ -477,7 +477,7 @@ by using the poppler rendering engine.")
        #:tests? #f ; Tests fail: "Gtk cannot open display".
        #:test-target "test"
        #:phases
-       (alist-delete 'configure %standard-phases)))
+       (modify-phases %standard-phases (delete 'configure))))
     (home-page "https://pwmt.org/projects/zathura/")
     (synopsis "Lightweight keyboard-driven PDF viewer")
     (description "Zathura is a customizable document viewer.  It provides a
@@ -510,14 +510,14 @@ interaction.")
      `(#:configure-flags '("-DPODOFO_BUILD_SHARED=ON"
                            "-DPODOFO_BUILD_STATIC=ON")
        #:phases
-         (alist-cons-before
-         'configure 'patch
-         (lambda* (#:key inputs #:allow-other-keys)
-           (let ((freetype (assoc-ref inputs "freetype")))
-             ;; Look for freetype include files in the correct place.
-             (substitute* "cmake/modules/FindFREETYPE.cmake"
-               (("/usr/local") freetype))))
-         %standard-phases)))
+       (modify-phases %standard-phases
+         (add-before 'configure 'patch
+           (lambda* (#:key inputs #:allow-other-keys)
+             (let ((freetype (assoc-ref inputs "freetype")))
+               ;; Look for freetype include files in the correct place.
+               (substitute* "cmake/modules/FindFREETYPE.cmake"
+                 (("/usr/local") freetype)))
+             #t)))))
     (home-page "http://podofo.sourceforge.net")
     (synopsis "Tools to work with the PDF file format")
     (description
@@ -763,12 +763,13 @@ the PDF pages.")
                 "0bw224vb7jh0lrqaf4jgxk48xglvxs674qcpj5y0axyfbh896cfk"))))
     (build-system gnu-build-system)
     (arguments
-      '(#:phases (alist-cons-after
-                  'unpack 'patch-ldconfig
-                  (lambda _
-                   (substitute* "mk/Autoconf.mk"
-                    (("/sbin/ldconfig -p") "echo lib")) #t)
-                  (alist-delete 'configure %standard-phases))
+     '(#:phases
+       (modify-phases %standard-phases
+         (add-after 'unpack 'patch-ldconfig
+           (lambda _
+             (substitute* "mk/Autoconf.mk"
+               (("/sbin/ldconfig -p") "echo lib")) #t))
+         (delete 'configure))
         #:tests? #f
         #:make-flags (list "CC=gcc"
                            (string-append "prefix=" (assoc-ref %outputs "out")))))