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authorEric Bavier <bavier@member.fsf.org>2014-05-19 00:08:30 -0500
committerEric Bavier <bavier@member.fsf.org>2014-05-19 00:15:11 -0500
commitf8ed036a317ee87ced2422d61c84a821b15fb5e1 (patch)
tree168832ff96093c10dc9826a25039c1050c5652ea /gnu/packages/patches
parentc711f07c3e1f512fbd6d61ab5acc62064ad46697 (diff)
downloadguix-f8ed036a317ee87ced2422d61c84a821b15fb5e1.tar
guix-f8ed036a317ee87ced2422d61c84a821b15fb5e1.tar.gz
gnu: Add scotch package.
* gnu/packages/maths.scm (scotch): New variable. * gnu/packages/patches/scotch-test-threading.patch: New patch. * gnu-system.am (dist_patch_DATA): Add it.
Diffstat (limited to 'gnu/packages/patches')
-rw-r--r--gnu/packages/patches/scotch-test-threading.patch139
1 files changed, 139 insertions, 0 deletions
diff --git a/gnu/packages/patches/scotch-test-threading.patch b/gnu/packages/patches/scotch-test-threading.patch
new file mode 100644
index 0000000000..2527a6e6dd
--- /dev/null
+++ b/gnu/packages/patches/scotch-test-threading.patch
@@ -0,0 +1,139 @@
+* These tests assume threading support, even when the library is compiled
+ without it. Protect these checks.
+
+* Tests should not require keyboard interaction.
+
+--- a/src/check/test_scotch_dgraph_band.c 2012-09-27 10:46:42.000000000 -0500
++++ b/src/check/test_scotch_dgraph_band.c 2014-05-13 14:36:07.479270243 -0500
+@@ -99,10 +99,12 @@
+ errorPrint ("main: Cannot initialize (1)");
+ exit (1);
+ }
++#ifdef SCOTCH_PTHREAD
+ if (thrdlvlreqval > thrdlvlproval) {
+ errorPrint ("main: Cannot initialize (2)");
+ exit (1);
+ }
++#endif
+
+ if (argc != 2) {
+ errorPrint ("main: invalid number of parameters");
+@@ -115,12 +117,14 @@
+
+ fprintf (stderr, "Proc %2d of %2d, pid %d\n", proclocnum, procglbnbr, getpid ());
+
++#ifdef SCOTCH_DEBUG_CHECK2
+ if (proclocnum == 0) { /* Synchronize on keybord input */
+ char c;
+
+ printf ("Waiting for key press...\n");
+ scanf ("%c", &c);
+ }
++#endif /* SCOTCH_DEBUG_CHECK2 */
+
+ if (MPI_Barrier (proccomm) != MPI_SUCCESS) { /* Synchronize for debug */
+ errorPrint ("main: cannot communicate");
+--- a/src/check/test_scotch_dgraph_grow.c 2012-11-30 12:19:33.000000000 -0600
++++ b/src/check/test_scotch_dgraph_grow.c 2014-05-13 14:35:31.307269303 -0500
+@@ -103,10 +103,12 @@
+ errorPrint ("main: Cannot initialize (1)");
+ exit (1);
+ }
++#ifdef SCOTCH_PTHREAD
+ if (thrdlvlreqval > thrdlvlproval) {
+ errorPrint ("main: Cannot initialize (2)");
+ exit (1);
+ }
++#endif
+
+ if (argc != 2) {
+ errorPrint ("main: invalid number of parameters");
+@@ -119,12 +121,14 @@
+
+ fprintf (stderr, "Proc %2d of %2d, pid %d\n", proclocnum, procglbnbr, getpid ());
+
++#ifdef SCOTCH_DEBUG_CHECK2
+ if (proclocnum == 0) { /* Synchronize on keybord input */
+ char c;
+
+ printf ("Waiting for key press...\n");
+ scanf ("%c", &c);
+ }
++#endif /* SCOTCH_DEBUG_CHECK2 */
+
+ if (MPI_Barrier (proccomm) != MPI_SUCCESS) { /* Synchronize for debug */
+ errorPrint ("main: cannot communicate");
+--- a/src/check/test_scotch_dgraph_redist.c 2012-09-26 11:42:27.000000000 -0500
++++ b/src/check/test_scotch_dgraph_redist.c 2014-05-13 14:34:30.323267722 -0500
+@@ -98,10 +98,12 @@
+ errorPrint ("main: Cannot initialize (1)");
+ exit (1);
+ }
++#ifdef SCOTCH_PTHREAD
+ if (thrdlvlreqval > thrdlvlproval) {
+ errorPrint ("main: Cannot initialize (2)");
+ exit (1);
+ }
++#endif
+
+ if (argc != 2) {
+ errorPrint ("main: invalid number of parameters");
+@@ -114,7 +116,6 @@
+
+ fprintf (stderr, "Proc %2d of %2d, pid %d\n", proclocnum, procglbnbr, getpid ());
+
+-#define SCOTCH_DEBUG_CHECK2
+ #ifdef SCOTCH_DEBUG_CHECK2
+ if (proclocnum == 0) { /* Synchronize on keybord input */
+ char c;
+--- /tmp/nix-build-scotch-6.0.0.drv-9/scotch_6.0.0/src/check/test_common_thread.c 2012-11-30 11:05:23.000000000 -0600
++++ scotch_6.0.0/src/check/test_common_thread.c 2014-05-13 17:26:27.159535244 -0500
+@@ -90,7 +90,7 @@
+ /* */
+ /*************************/
+
+-#if ((defined COMMON_PTHREAD) || (defined SCOTCH_PTHREAD))
++#ifdef SCOTCH_PTHREAD
+
+ static
+ void
+@@ -161,7 +161,7 @@
+ return (o);
+ }
+
+-#endif /* ((defined COMMON_PTHREAD) || (defined SCOTCH_PTHREAD)) */
++#endif /* SCOTCH_PTHREAD */
+
+ /*********************/
+ /* */
+@@ -175,14 +175,14 @@
+ char * argv[])
+ {
+ TestThreadGroup groudat;
+-#if ((defined COMMON_PTHREAD) || (defined SCOTCH_PTHREAD))
++#ifdef SCOTCH_PTHREAD
+ TestThread * restrict thrdtab;
+ int thrdnbr;
+-#endif /* ((defined COMMON_PTHREAD) || (defined SCOTCH_PTHREAD)) */
++#endif /* SCOTCH_PTHREAD */
+
+ SCOTCH_errorProg (argv[0]);
+
+-#if ((defined COMMON_PTHREAD) || (defined SCOTCH_PTHREAD))
++#ifdef SCOTCH_PTHREAD
+ thrdnbr = SCOTCH_PTHREAD_NUMBER;
+
+ groudat.redusum = COMPVAL (thrdnbr);
+@@ -197,9 +197,9 @@
+ errorPrint ("main: cannot launch or run threads");
+ return (1);
+ }
+-#else /* ((defined COMMON_PTHREAD) || (defined SCOTCH_PTHREAD)) */
+- printf ("Scotch not compiled with either COMMON_PTHREAD or SCOTCH_PTHREAD\n");
+-#endif /* ((defined COMMON_PTHREAD) || (defined SCOTCH_PTHREAD)) */
++#else /* not SCOTCH_PTHREAD */
++ printf ("Scotch not compiled with SCOTCH_PTHREAD\n");
++#endif /* not SCOTCH_PTHREAD */
+
+ return (0);
+ }