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authorBen Woodcroft <donttrustben@gmail.com>2018-09-22 08:19:09 +1000
committerBen Woodcroft <donttrustben@gmail.com>2018-09-22 09:16:47 +1000
commit05fb1e0017030f1c0cbc7e9a1adeccca57ef1d9d (patch)
tree8d6f02eee6074d0243589ea5a6939a0bfcac06f4 /gnu/packages/patches
parent78b7b9dbe9098c9c47c7acba363223bb6c5bb1c8 (diff)
downloadguix-05fb1e0017030f1c0cbc7e9a1adeccca57ef1d9d.tar
guix-05fb1e0017030f1c0cbc7e9a1adeccca57ef1d9d.tar.gz
gnu: hmmer: Update to 3.2.1.
* gnu/packages/bioinformatics.scm (hmmer): Update to 3.2.1. [origin]: Remove patch. [license]: Change to BSD-3. [supported-systems]: New field. * gnu/packages/patches/hmmer-remove-cpu-specificity.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
Diffstat (limited to 'gnu/packages/patches')
-rw-r--r--gnu/packages/patches/hmmer-remove-cpu-specificity.patch22
1 files changed, 0 insertions, 22 deletions
diff --git a/gnu/packages/patches/hmmer-remove-cpu-specificity.patch b/gnu/packages/patches/hmmer-remove-cpu-specificity.patch
deleted file mode 100644
index ba98db4d0e..0000000000
--- a/gnu/packages/patches/hmmer-remove-cpu-specificity.patch
+++ /dev/null
@@ -1,22 +0,0 @@
-This patch removes compilation flags which make the build for the machine
-where compilation takes place, rendering the build not reproducible.
-
-diff --git a/configure b/configure
-index 8b6aaef..49a6afc 100755
---- a/configure
-+++ b/configure
-@@ -6125,14 +6125,6 @@ fi # guess arch
-
- if test "x$ax_gcc_arch" != x -a "x$ax_gcc_arch" != xno; then
- for arch in $ax_gcc_arch; do
-- if test "x$acx_maxopt_portable" = xyes; then # if we require portable code
-- flags="-mtune=$arch"
-- # -mcpu=$arch and m$arch generate nonportable code on every arch except
-- # x86. And some other arches (e.g. Alpha) don't accept -mtune. Grrr.
-- case $host_cpu in i*86|x86_64*) flags="$flags -mcpu=$arch -m$arch";; esac
-- else
-- flags="-march=$arch -mcpu=$arch -m$arch"
-- fi
- for flag in $flags; do
- as_CACHEVAR=`$as_echo "ax_cv_check_cflags__$flag" | $as_tr_sh`
- { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether C compiler accepts $flag" >&5