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| author | Ben Woodcroft <donttrustben@gmail.com> | 2017-07-03 23:00:14 +1000 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2017-07-08 12:05:59 +1000 |
| commit | 4732e6ee84fea4e58b8a62cad054b10966f4f6e6 (patch) | |
| tree | 6e808b2b7abb09b4d954d045fbe916952006786a /gnu/packages/patches | |
| parent | f2fa86cc82b5941bde63b666337eea59aa609e55 (diff) | |
| download | guix-4732e6ee84fea4e58b8a62cad054b10966f4f6e6.tar guix-4732e6ee84fea4e58b8a62cad054b10966f4f6e6.tar.gz | |
gnu: blast+: Update to 2.6.0.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre. Add patch.
[arguments]: Replace paths in run_with_lock.c. Configure with pcre.
[inputs]: Add pcre, perl, python.
* gnu/packages/patches/blast+-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Diffstat (limited to 'gnu/packages/patches')
| -rw-r--r-- | gnu/packages/patches/blast+-fix-makefile.patch | 15 |
1 files changed, 15 insertions, 0 deletions
diff --git a/gnu/packages/patches/blast+-fix-makefile.patch b/gnu/packages/patches/blast+-fix-makefile.patch new file mode 100644 index 0000000000..bfa46a7e51 --- /dev/null +++ b/gnu/packages/patches/blast+-fix-makefile.patch @@ -0,0 +1,15 @@ +Without this patch, the 'make install' attempts to 'install' a directory, which causes an error. + +diff --git a/c++/src/build-system/Makefile.in.top b/c++/src/build-system/Makefile.in.top +index 1abe44f..d6000b3 100644 +--- a/c++/src/build-system/Makefile.in.top ++++ b/c++/src/build-system/Makefile.in.top +@@ -51,7 +51,7 @@ install-toolkit: + done + cd $(includedir0) && find * -name CVS -prune -o -print |\ + cpio -pd $(pincludedir) +- $(INSTALL) -m 644 $(incdir)/* $(pincludedir) ++ cp -R $(incdir)/* $(pincludedir) + ## set up appropriate build and status directories somewhere under $(libdir)? + + install-gbench: |