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authorBen Woodcroft <donttrustben@gmail.com>2017-08-31 09:31:54 +0800
committerBen Woodcroft <donttrustben@gmail.com>2017-08-31 10:43:18 +0800
commit690a904ad766dfecf78749d121af528a7a49fa77 (patch)
treeef49217529233ca8f8ba3ad5caaa008fd844859d /gnu/packages/patches/metabat-fix-boost-issue.patch
parent2d2e97bd71ac034900e26dd759b106fae0839162 (diff)
downloadguix-690a904ad766dfecf78749d121af528a7a49fa77.tar
guix-690a904ad766dfecf78749d121af528a7a49fa77.tar.gz
gnu: metabat: Update to 2.11.3.
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.3. [source]: Use git-fetch. Remove boost-related patch. * gnu/packages/patches/metabat-fix-boost-issue.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
Diffstat (limited to 'gnu/packages/patches/metabat-fix-boost-issue.patch')
-rw-r--r--gnu/packages/patches/metabat-fix-boost-issue.patch27
1 files changed, 0 insertions, 27 deletions
diff --git a/gnu/packages/patches/metabat-fix-boost-issue.patch b/gnu/packages/patches/metabat-fix-boost-issue.patch
deleted file mode 100644
index 3382d84d66..0000000000
--- a/gnu/packages/patches/metabat-fix-boost-issue.patch
+++ /dev/null
@@ -1,27 +0,0 @@
-This patch fixes the issue described at
-https://bitbucket.org/berkeleylab/metabat/issues/28/compilation-fail-with-boost-164
-
-diff --git a/src/metabat.h b/src/metabat.h
-index 32ae94c..2292c04 100644
---- a/src/metabat.h
-+++ b/src/metabat.h
-@@ -35,6 +35,7 @@ KSEQ_INIT(gzFile, gzread)
-
- #include <boost/program_options.hpp>
- #include <boost/algorithm/string.hpp>
-+#include <boost/serialization/array_wrapper.hpp>
- #include <boost/numeric/ublas/matrix.hpp>
- #include <boost/math/distributions.hpp>
- #include <boost/serialization/serialization.hpp>
-diff --git a/src/metabat2.h b/src/metabat2.h
-index 60a9998..19fa815 100644
---- a/src/metabat2.h
-+++ b/src/metabat2.h
-@@ -41,6 +41,7 @@ KSEQ_INIT(gzFile, gzread)
-
- #include <boost/program_options.hpp>
- #include <boost/algorithm/string.hpp>
-+#include <boost/serialization/array_wrapper.hpp>
- #include <boost/numeric/ublas/matrix.hpp>
- #include <boost/numeric/ublas/matrix_sparse.hpp>
- #include <boost/numeric/ublas/matrix_proxy.hpp>