gnu: Use 'modify-phases' syntax.

* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal,
wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use
'modify-phases' syntax.
* gnu/packages/algebra.scm (arb)[arguments]: Likewise.
* gnu/packages/apr.scm (apr-util)[arguments]: Likewise.
* gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano,
lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound,
zita-convolver, zita-alsa-pcmi)[arguments]: Likewise.
* gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express,
flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise.
* gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise.
* gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise.
* gnu/packages/compression.scm (sharutils)[arguments]: Likewise.
* gnu/packages/conky.scm (conky)[arguments]: Likewise.
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise.
* gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise.
* gnu/packages/display-managers.scm (slim)[arguments]: Likewise.
* gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise.
* gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise.
* gnu/packages/engineering.scm (pcb)[arguments]: Likewise.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise.
* gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise.
* gnu/packages/fltk.scm (fltk)[arguments]: Likewise.
* gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise.
* gnu/packages/gd.scm (perl-gd)[arguments]: Likewise.
* gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise.
* gnu/packages/glib.scm (glibmm)[arguments]: Likewise.
* gnu/packages/gl.scm (glew)[arguments]: Likewise.
* gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs,
libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise.
* gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise.
* gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise.
* gnu/packages/graphics.scm (agg)[arguments]: Likewise.
* gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present,
python2-pycairo)[arguments]: Likewise.
* gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise.
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise.
* gnu/packages/hugs.scm (hugs)[arguments]: Likewise.
* gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal)
[arguments]: Likewise.
* gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise.
* gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise.
* gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static,
lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools)
[arguments]: Likewise.
* gnu/packages/lisp.scm (ccl)[arguments]: Likewise.
* gnu/packages/lout.scm (lout)[arguments]: Likewise.
* gnu/packages/lua.scm (luajit)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise.
* gnu/packages/mail.scm (exim)[arguments]: Likewise.
* gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise.
* gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun)
[arguments]: Likewise.
* gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise.
* gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise.
* gnu/packages/music.scm (solfege)[arguments]: Likewise.
* gnu/packages/noweb.scm (noweb)[arguments]: Likewise.
* gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]:
Likewise.
* gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu,
zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise.
* gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]:
Likewise.
* gnu/packages/photo.scm (gphoto2)[arguments]: Likewise.
* gnu/packages/popt.scm (popt)[arguments]: Likewise.
* gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]:
Likewise.
* gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise.
* gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy,
python-sqlalchemy, python-docopt)[arguments]: Likewise.
* gnu/packages/rdf.scm (lrdf)[arguments]: Likewise.
* gnu/packages/regex.scm (tre)[arguments]: Likewise.
* gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise.
* gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise.
* gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise.
* gnu/packages/scheme.scm (racket)[arguments]: Likewise.
* gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise.
* gnu/packages/serveez.scm (serveez)[arguments]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise.
* gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise.
* gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise.
* gnu/packages/tcl.scm (expect)[arguments]: Likewise.
* gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise.
* gnu/packages/textutils.scm (recode, libgtextutils)[arguments]:
Likewise.
* gnu/packages/time.scm (time)[arguments]: Likewise.
* gnu/packages/tor.scm (privoxy)[arguments]: Likewise.
* gnu/packages/uucp.scm (uucp)[arguments]: Likewise.
* gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise.
* gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise.
* gnu/packages/web.scm (tinyproxy)[arguments]: Likewise.
* gnu/packages/wicd.scm (wicd)[arguments]: Likewise.
* gnu/packages/wm.scm (bspwm)[arguments]: Likewise.
* gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise.
* gnu/packages/xfce.scm (xfconf)[arguments]: Likewise.
* gnu/packages/xfig.scm (transfig)[arguments]: Likewise.
* gnu/packages/xorg.scm (imake)[arguments]: Likewise.

1 files changed, 50 insertions, 50 deletions

diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index f326f6af72..488c42b28d 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -456,13 +456,14 @@ large scale eigenvalue problems.")
 
                           ;; Build the 'LAPACKE_clatms' functions.
                           "-DLAPACKE_WITH_TMG=ON")
-       #:phases (alist-cons-before
-                 'check 'patch-python
-                 (lambda* (#:key inputs #:allow-other-keys)
-                   (let ((python (assoc-ref inputs "python")))
-                     (substitute* "lapack_testing.py"
-                       (("/usr/bin/env python") python))))
-                  %standard-phases)))
+       #:phases
+       (modify-phases %standard-phases
+         (add-before 'check 'patch-python
+           (lambda* (#:key inputs #:allow-other-keys)
+             (let ((python (assoc-ref inputs "python")))
+               (substitute* "lapack_testing.py"
+                 (("/usr/bin/env python") python)))
+             #t)))))
     (synopsis "Library for numerical linear algebra")
     (description
      "LAPACK is a Fortran 90 library for solving the most commonly occurring
@@ -1866,12 +1867,12 @@ void mc64ad_ (int *a, int *b, int *c, int *d, int *e, double *f, int *g,
     (arguments
      `(#:parallel-build? #f             ;race conditions using ar
        #:phases
-       (alist-replace
-        'configure
-        (lambda* (#:key inputs outputs #:allow-other-keys)
-          (call-with-output-file "make.inc"
-            (lambda (port)
-              (format port "
+       (modify-phases %standard-phases
+         (replace 'configure
+           (lambda* (#:key inputs outputs #:allow-other-keys)
+             (call-with-output-file "make.inc"
+               (lambda (port)
+                 (format port "
 PLAT        =
 DSuperLUroot = ~a
 DSUPERLULIB  = ~a/lib/libsuperlu_dist.a
@@ -1894,47 +1895,46 @@ FORTRAN     = mpifort
 FFLAGS      = -O2 -g $(PIC)
 LOADER      = $(CC)
 CDEFS       = -DAdd_"
-                      (getcwd)
-                      (assoc-ref outputs "out")
-                      (assoc-ref inputs "lapack")
-                      (assoc-ref inputs "pt-scotch")))))
-        (alist-cons-after
-         'unpack 'remove-broken-symlinks
-         (lambda _
-           (for-each delete-file
-                     (find-files "MAKE_INC" "\\.#make\\..*")))
-         (alist-cons-before
-          'build 'create-install-directories
-          (lambda* (#:key outputs #:allow-other-keys)
-            (for-each
-             (lambda (dir)
-               (mkdir-p (string-append (assoc-ref outputs "out")
-                                       "/" dir)))
-             '("lib" "include")))
-          (alist-replace
-           'check
+                         (getcwd)
+                         (assoc-ref outputs "out")
+                         (assoc-ref inputs "lapack")
+                         (assoc-ref inputs "pt-scotch"))))
+             #t))
+         (add-after 'unpack 'remove-broken-symlinks
+           (lambda _
+             (for-each delete-file
+                       (find-files "MAKE_INC" "\\.#make\\..*"))
+             #t))
+         (add-before 'build 'create-install-directories
+           (lambda* (#:key outputs #:allow-other-keys)
+             (for-each
+              (lambda (dir)
+                (mkdir-p (string-append (assoc-ref outputs "out")
+                                        "/" dir)))
+              '("lib" "include"))
+             #t))
+         (replace 'check
            (lambda _
              (with-directory-excursion "EXAMPLE"
                (and
                 (zero? (system* "mpirun" "-n" "2"
                                 "./pddrive" "-r" "1" "-c" "2" "g20.rua"))
                 (zero? (system* "mpirun" "-n" "2"
-                                "./pzdrive" "-r" "1" "-c" "2" "cg20.cua")))))
-           (alist-replace
-            'install
-            (lambda* (#:key outputs #:allow-other-keys)
-              ;; Library is placed in lib during the build phase.  Copy over
-              ;; headers to include.
-              (let* ((out    (assoc-ref outputs "out"))
-                     (incdir (string-append out "/include")))
-                (for-each (lambda (file)
-                            (let ((base (basename file)))
-                              (format #t "installing `~a' to `~a'~%"
-                                      base incdir)
-                              (copy-file file
-                                         (string-append incdir "/" base))))
-                          (find-files "SRC" ".*\\.h$"))))
-            %standard-phases)))))))
+                                "./pzdrive" "-r" "1" "-c" "2" "cg20.cua"))))))
+         (replace 'install
+           (lambda* (#:key outputs #:allow-other-keys)
+             ;; Library is placed in lib during the build phase.  Copy over
+             ;; headers to include.
+             (let* ((out    (assoc-ref outputs "out"))
+                    (incdir (string-append out "/include")))
+               (for-each (lambda (file)
+                           (let ((base (basename file)))
+                             (format #t "installing `~a' to `~a'~%"
+                                     base incdir)
+                             (copy-file file
+                                        (string-append incdir "/" base))))
+                         (find-files "SRC" ".*\\.h$")))
+             #t)))))
     (home-page (package-home-page superlu))
     (synopsis "Parallel supernodal direct solver")
     (description
@@ -2621,7 +2621,7 @@ access to BLIS implementations via traditional BLAS routine calls.")
        (list (string-append "prefix=" (assoc-ref %outputs "out")))
        #:phases
        ;; no configure script
-       (alist-delete 'configure %standard-phases)
+       (modify-phases %standard-phases (delete 'configure))
        #:tests? #f)) ;the tests are part of the default target
     (home-page "http://openlibm.org/")
     (synopsis "Portable C mathematical library (libm)")
@@ -2660,7 +2660,7 @@ environments.")
        #:make-flags
        (list (string-append "prefix=" (assoc-ref %outputs "out")))
        ;; no configure script
-       #:phases (alist-delete 'configure %standard-phases)))
+       #:phases (modify-phases %standard-phases (delete 'configure))))
     (inputs
      `(("fortran" ,gfortran)))
     (home-page "https://github.com/JuliaLang/openspecfun")