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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-03-19 10:45:40 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-03-19 11:07:55 +0100 |
| commit | 32b7ccf9b4c490613395d5f8ad06334c797e47e0 (patch) | |
| tree | 00bb2675e9a952a5c19b6c739586954dcf07ba0a /gnu/packages/bioinformatics.scm | |
| parent | 2915221bcba0ee152b9d1910ec2462f2d5ebf8e7 (diff) | |
| download | guix-32b7ccf9b4c490613395d5f8ad06334c797e47e0.tar guix-32b7ccf9b4c490613395d5f8ad06334c797e47e0.tar.gz | |
gnu: pigx-chipseq: Update to 0.0.8.
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.8.
[inputs]: Add python-magic, python-xlrd, and trim-galore.
[arguments]: Disable tests.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 10 |
1 files changed, 7 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 91f5d617eb..80f1437f22 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -12737,7 +12737,7 @@ expression report comparing samples in an easily configurable manner.") (define-public pigx-chipseq (package (name "pigx-chipseq") - (version "0.0.2") + (version "0.0.8") (source (origin (method url-fetch) (uri (string-append "https://github.com/BIMSBbioinfo/pigx_chipseq/" @@ -12745,10 +12745,11 @@ expression report comparing samples in an easily configurable manner.") "/pigx_chipseq-" version ".tar.gz")) (sha256 (base32 - "1jliwhifnjgl9x0z730bzpxswi2s84fyg5y8cagbyzpw509452f5")))) + "1plw0bz0b7flj0g9irbn8n520005lmajkiq5flpizzapsl0a0r9g")))) (build-system gnu-build-system) (arguments - `(#:phases + `(#:tests? #f ; parts of the tests rely on access to the network + #:phases (modify-phases %standard-phases (add-after 'install 'wrap-executable ;; Make sure the executable finds all R modules. @@ -12773,8 +12774,11 @@ expression report comparing samples in an easily configurable manner.") ("r-ggplot2" ,r-ggplot2) ("r-plotly" ,r-plotly) ("python-wrapper" ,python-wrapper) + ("python-magic" ,python-magic) ("python-pyyaml" ,python-pyyaml) + ("python-xlrd" ,python-xlrd) ("snakemake" ,snakemake) + ("trim-galore" ,trim-galore) ("macs" ,macs) ("multiqc" ,multiqc) ("perl" ,perl) |