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| author | Ricardo Wurmus <rekado@elephly.net> | 2017-11-07 15:41:23 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2017-11-07 23:32:43 +0100 |
| commit | e2b927993efc9254a941d035fb17f9ebaf330eac (patch) | |
| tree | 8da26fbfad5da3d42bbbe8b4d665156f3799446e /gnu/packages/bioinformatics.scm | |
| parent | 96a392a0b2511bcea94f382b1dd36a189b3f856e (diff) | |
| download | guix-e2b927993efc9254a941d035fb17f9ebaf330eac.tar guix-e2b927993efc9254a941d035fb17f9ebaf330eac.tar.gz | |
gnu: Add r-gqtlbase.
* gnu/packages/bioinformatics.scm (r-gqtlbase): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 35 |
1 files changed, 35 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f130d71327..2200842164 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9792,6 +9792,41 @@ gene identifier conversion and mapping homologous genes across related organisms via the @code{g:Profiler} toolkit.") (license license:gpl2+))) +(define-public r-gqtlbase + (package + (name "r-gqtlbase") + (version "1.10.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "gQTLBase" version)) + (sha256 + (base32 + "1756vfcj2dkkgcmfkkg7qdaig36dv9gfvpypn9rbrky56wm1p035")))) + (properties `((upstream-name . "gQTLBase"))) + (build-system r-build-system) + (propagated-inputs + `(("r-batchjobs" ,r-batchjobs) + ("r-bbmisc" ,r-bbmisc) + ("r-biocgenerics" ,r-biocgenerics) + ("r-bit" ,r-bit) + ("r-doparallel" ,r-doparallel) + ("r-ff" ,r-ff) + ("r-ffbase" ,r-ffbase) + ("r-foreach" ,r-foreach) + ("r-genomicfiles" ,r-genomicfiles) + ("r-genomicranges" ,r-genomicranges) + ("r-rtracklayer" ,r-rtracklayer) + ("r-s4vectors" ,r-s4vectors) + ("r-summarizedexperiment" ,r-summarizedexperiment))) + (home-page "https://bioconductor.org/packages/gQTLBase") + (synopsis "Infrastructure for eQTL, mQTL and similar studies") + (description + "The purpose of this package is to simplify the storage and interrogation +of @dfn{quantitative trait loci} (QTL) archives, such as eQTL, mQTL, dsQTL, +and more.") + (license license:artistic2.0))) + (define-public r-qvalue (package (name "r-qvalue") |