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authorRicardo Wurmus <rekado@elephly.net>2018-06-22 11:33:50 +0200
committerRicardo Wurmus <rekado@elephly.net>2018-06-22 11:40:27 +0200
commitc57e50b2b9800ce53f7ff9b7b81bb862897a9a2c (patch)
treee73f7fba1982e5a436dc689ffbbc4dd19f35a293 /gnu/packages/bioinformatics.scm
parent145b06938c448a546e40fe97b2e1f4171b53f4fa (diff)
downloadguix-c57e50b2b9800ce53f7ff9b7b81bb862897a9a2c.tar
guix-c57e50b2b9800ce53f7ff9b7b81bb862897a9a2c.tar.gz
gnu: pigx-chipseq: Update to 0.0.17.
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.17. [arguments]: Remove "wrap-executable" phase.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm18
1 files changed, 4 insertions, 14 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b9b7e95203..ecc1c06630 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -12906,7 +12906,7 @@ expression report comparing samples in an easily configurable manner.")
(define-public pigx-chipseq
(package
(name "pigx-chipseq")
- (version "0.0.16")
+ (version "0.0.17")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_chipseq/"
@@ -12914,20 +12914,10 @@ expression report comparing samples in an easily configurable manner.")
"/pigx_chipseq-" version ".tar.gz"))
(sha256
(base32
- "0s53840z53pih0jkllmcfb2la7c36zxmf229fshhyq8n6a2hgr8f"))))
+ "1c0x5lswvc8v9fw4iynl5rcfs7h7clzp4hqdnl65ia7rk35n4zg9"))))
(build-system gnu-build-system)
- (arguments
- `(#:tests? #f ; parts of the tests rely on access to the network
- #:phases
- (modify-phases %standard-phases
- (add-after 'install 'wrap-executable
- ;; Make sure the executable finds all R modules.
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- (wrap-program (string-append out "/bin/pigx-chipseq")
- `("R_LIBS_SITE" ":" = (,(getenv "R_LIBS_SITE")))
- `("PYTHONPATH" ":" = (,(getenv "PYTHONPATH")))))
- #t)))))
+ ;; parts of the tests rely on access to the network
+ (arguments '(#:tests? #f))
(inputs
`(("grep" ,grep)
("coreutils" ,coreutils)