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| author | Marius Bakke <mbakke@fastmail.com> | 2018-12-09 00:18:32 +0100 |
|---|---|---|
| committer | Marius Bakke <mbakke@fastmail.com> | 2018-12-09 00:18:32 +0100 |
| commit | fbb7b04a8563fbb5dfbe7b3c7be171c8dec23442 (patch) | |
| tree | 5508f13c24ef19dd018cd91fe287e8fa50eda7e4 /gnu/packages/bioinformatics.scm | |
| parent | 16735b0b632b5f05fc914836b8f345e3a9e601dd (diff) | |
| parent | cec0c4e29c6efb337ae65d9c533cdbb2bf724430 (diff) | |
| download | guix-fbb7b04a8563fbb5dfbe7b3c7be171c8dec23442.tar guix-fbb7b04a8563fbb5dfbe7b3c7be171c8dec23442.tar.gz | |
Merge branch 'master' into staging
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 14 |
1 files changed, 11 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 026527cd36..e17c53675c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4024,6 +4024,14 @@ sequences).") "src/mash/CommandScreen.cpp") (("^#include \"kseq\\.h\"") "#include \"htslib/kseq.h\"")) + #t)) + (add-after 'fix-includes 'use-c++14 + (lambda _ + ;; capnproto 0.7 requires c++14 to build + (substitute* "configure.ac" + (("c\\+\\+11") "c++14")) + (substitute* "Makefile.in" + (("c\\+\\+11") "c++14")) #t))))) (native-inputs `(("autoconf" ,autoconf) @@ -12957,7 +12965,7 @@ once. This package provides tools to perform Drop-seq analyses.") (define-public pigx-rnaseq (package (name "pigx-rnaseq") - (version "0.0.4") + (version "0.0.5") (source (origin (method url-fetch) (uri (string-append "https://github.com/BIMSBbioinfo/pigx_rnaseq/" @@ -12965,7 +12973,7 @@ once. This package provides tools to perform Drop-seq analyses.") "/pigx_rnaseq-" version ".tar.gz")) (sha256 (base32 - "16gla23rmziimqan7w494q0nr7vfbp42zzkrl9fracmr4k7b1kzr")))) + "05gn658zpj9xki5dbs728z9zxq1mcm25hkwr5vzwqxsfi15l5f2l")))) (build-system gnu-build-system) (arguments `(#:parallel-tests? #f ; not supported @@ -12981,7 +12989,7 @@ once. This package provides tools to perform Drop-seq analyses.") #t))))) (inputs `(("gzip" ,gzip) - ("snakemake" ,snakemake-4) + ("snakemake" ,snakemake) ("fastqc" ,fastqc) ("multiqc" ,multiqc) ("star" ,star) |