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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-06-14 17:26:27 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-06-14 17:32:04 +0200 |
| commit | bc70516bbae8a6388f3ed19008d3e10efd1577a7 (patch) | |
| tree | 0e07d94487130d1d2fdd3c2506abc0f4e29c3923 /gnu/packages/bioinformatics.scm | |
| parent | f063f0efebe484a0f4cb1aed6e49053860fdd822 (diff) | |
| download | guix-bc70516bbae8a6388f3ed19008d3e10efd1577a7.tar guix-bc70516bbae8a6388f3ed19008d3e10efd1577a7.tar.gz | |
gnu: Remove r-loomr.
The loomR package is actually non-free software according to its author. See
https://github.com/mojaveazure/loomR/pull/24.
* gnu/packages/bioinformatics.scm (r-loomr): Remove variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 29 |
1 files changed, 0 insertions, 29 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 8dbcd5dd33..b950b8cf53 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -13086,35 +13086,6 @@ known and yet unknown splice junctions. Circular-to-linear ratios of circRNAs can be calculated, and a number of descriptive plots easily generated.") (license license:artistic2.0))) -(define-public r-loomr - (let ((commit "df0144bd2bbceca6fadef9edc1bbc5ca672d4739") - (revision "1")) - (package - (name "r-loomr") - (version (git-version "0.2.0" revision commit)) - (source - (origin - (method git-fetch) - (uri (git-reference - (url "https://github.com/mojaveazure/loomR.git") - (commit commit))) - (file-name (git-file-name name version)) - (sha256 - (base32 - "1b1g4dlmfdyhn56bz1mkh9ymirri43wiz7rjhs7py3y7bdw1s3yr")))) - (build-system r-build-system) - (propagated-inputs - `(("r-r6" ,r-r6) - ("r-hdf5r" ,r-hdf5r) - ("r-iterators" ,r-iterators) - ("r-itertools" ,r-itertools) - ("r-matrix" ,r-matrix))) - (home-page "https://github.com/mojaveazure/loomR") - (synopsis "R interface for loom files") - (description "This package provides an R interface to access, create, -and modify loom files. loomR aims to be completely compatible with loompy.") - (license license:gpl3)))) - (define-public gffread ;; We cannot use the tagged release because it is not in sync with gclib. ;; See https://github.com/gpertea/gffread/issues/26 |