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authorRicardo Wurmus <rekado@elephly.net>2022-09-21 10:54:47 +0200
committerRicardo Wurmus <rekado@elephly.net>2022-09-21 11:09:46 +0200
commit6ad4d74acab1032fdb217fe7155d7a6535265e6e (patch)
treef8badc31d56b445760f63a27c7c0f6dbedfd6453 /gnu/packages/bioinformatics.scm
parent29634a4ce3f3cca09b0980f8a49d47b31c2b2600 (diff)
downloadguix-6ad4d74acab1032fdb217fe7155d7a6535265e6e.tar
guix-6ad4d74acab1032fdb217fe7155d7a6535265e6e.tar.gz
gnu: Add r-gtrack.
* gnu/packages/bioinformatics.scm (r-gtrack): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm37
1 files changed, 37 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 46f147f496..cfae6731c4 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7338,6 +7338,43 @@ sequence.")
BAM files.")
(license license:gpl2))))
+(define-public r-gtrack
+ (let ((commit "a694fa36cedafca2658da79fc8e5b673535b15e5")
+ (revision "1"))
+ (package
+ (name "r-gtrack")
+ (version (git-version "0.1.0" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/mskilab/gTrack/")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "070qlrbqsbj9max2vx740zigqh0ymvnw2pm1ia5la3wb4dbfwh2b"))))
+ (properties `((upstream-name . "gTrack")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics
+ r-data-table
+ r-genomeinfodb
+ r-genomicranges
+ r-gutils
+ r-iranges
+ r-matrix
+ r-rcolorbrewer
+ r-rcpp
+ r-rcurl
+ r-rtracklayer
+ r-s4vectors))
+ (home-page "https://github.com/mskilab/gTrack/")
+ (synopsis "Plot tracks of complex genomic data across multiple genomic windows")
+ (description
+ "This package provides an object for plotting GRanges, RleList, UCSC
+file formats, and ffTrack objects in multi-track panels.")
+ (license license:gpl2))))
+
(define-public r-presto
(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
(revision "0"))