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authorMarius Bakke <mbakke@fastmail.com>2020-01-08 17:10:47 +0100
committerMarius Bakke <mbakke@fastmail.com>2020-01-08 21:56:04 +0100
commitb34c1258515e75bcc73be7911fd7d237db1dd14b (patch)
treeea3f4537a91f2899ff848c0a0890e7e119afecd8
parent23c883ef832d45387bb2a11451411a76be0c034f (diff)
downloadguix-b34c1258515e75bcc73be7911fd7d237db1dd14b.tar
guix-b34c1258515e75bcc73be7911fd7d237db1dd14b.tar.gz
gnu: doxygen: Update to 1.8.17.
* gnu/packages/documentation.scm (doxygen): Update to 1.8.17. [source](patches): Add doxygen-1.8.17-runtests.patch. [arguments]: Remove obsolete phase. * gnu/packages/patches/doxygen-test.patch: Adjust for upstream changes. * gnu/packages/patches/doxygen-1.8.17-runtests.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
-rw-r--r--gnu/local.mk1
-rw-r--r--gnu/packages/documentation.scm14
-rw-r--r--gnu/packages/patches/doxygen-1.8.17-runtests.patch73
-rw-r--r--gnu/packages/patches/doxygen-test.patch4
4 files changed, 80 insertions, 12 deletions
diff --git a/gnu/local.mk b/gnu/local.mk
index 60b3b652f1..e2b605e0b8 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -814,6 +814,7 @@ dist_patch_DATA = \
%D%/packages/patches/docker-use-fewer-modprobes.patch \
%D%/packages/patches/dovecot-trees-support-dovecot-2.3.patch \
%D%/packages/patches/doxygen-test.patch \
+ %D%/packages/patches/doxygen-1.8.17-runtests.patch \
%D%/packages/patches/dstat-fix-crash-when-specifying-delay.patch \
%D%/packages/patches/dstat-skip-devices-without-io.patch \
%D%/packages/patches/dvd+rw-tools-add-include.patch \
diff --git a/gnu/packages/documentation.scm b/gnu/packages/documentation.scm
index c512a9803b..c4a8c0242d 100644
--- a/gnu/packages/documentation.scm
+++ b/gnu/packages/documentation.scm
@@ -125,7 +125,7 @@ markup) can be customized and extended by the user.")
(define-public doxygen
(package
(name "doxygen")
- (version "1.8.16")
+ (version "1.8.17")
(home-page "http://www.doxygen.nl/")
(source (origin
(method url-fetch)
@@ -136,8 +136,9 @@ markup) can be customized and extended by the user.")
".src.tar.gz")))
(sha256
(base32
- "10iwv8bcz5b5cd85gg8pgn0bmyg04n9hs36xn7ggjjnvynv1z67z"))
- (patches (search-patches "doxygen-test.patch"))))
+ "16dmv0gm1x8rvbm82fmjvi213q8fxqxinm75pcf595flya59ific"))
+ (patches (search-patches "doxygen-test.patch"
+ "doxygen-1.8.17-runtests.patch"))))
(build-system cmake-build-system)
(native-inputs
`(("bison" ,bison)
@@ -157,13 +158,6 @@ markup) can be customized and extended by the user.")
'())
#:test-target "tests"
#:phases (modify-phases %standard-phases
- (add-after 'unpack 'remove-git-requirement
- (lambda _
- ;; TODO: Remove this for > 1.8.16.
- (substitute* "cmake/git_watcher.cmake"
- (("Git QUIET REQUIRED")
- "Git QUIET"))
- #t))
(add-before 'configure 'patch-sh
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "src/portable.cpp"
diff --git a/gnu/packages/patches/doxygen-1.8.17-runtests.patch b/gnu/packages/patches/doxygen-1.8.17-runtests.patch
new file mode 100644
index 0000000000..0340c72448
--- /dev/null
+++ b/gnu/packages/patches/doxygen-1.8.17-runtests.patch
@@ -0,0 +1,73 @@
+1.8.17 was released with a broken test runner.
+
+https://github.com/doxygen/doxygen/issues/7464
+
+Taken from upstream:
+https://github.com/doxygen/doxygen/commit/cd9dee013dc749a10bbe019c350e0e62b6635795
+
+diff --git a/testing/runtests.py b/testing/runtests.py
+index a4118b865..10fe50214 100755
+--- a/testing/runtests.py
++++ b/testing/runtests.py
+@@ -3,6 +3,7 @@
+ from __future__ import print_function
+ import argparse, glob, itertools, re, shutil, os, sys
+ import subprocess
++import shlex
+
+ config_reg = re.compile('.*\/\/\s*(?P<name>\S+):\s*(?P<value>.*)$')
+
+@@ -28,10 +29,10 @@ def xpopen(cmd, cmd1="",encoding='utf-8-sig', getStderr=False):
+ return os.popen(cmd).read() # Python 2 without encoding
+ else:
+ if (getStderr):
+- proc = subprocess.run(cmd1,encoding=encoding,capture_output=True) # Python 3 with encoding
+- return proc.stderr
++ proc = subprocess.Popen(shlex.split(cmd1),stdout=subprocess.PIPE,stderr=subprocess.PIPE,encoding=encoding) # Python 3 with encoding
++ return proc.stderr.read()
+ else:
+- proc = subprocess.Popen(cmd,stdout=subprocess.PIPE,stderr=subprocess.PIPE,encoding=encoding) # Python 3 with encoding
++ proc = subprocess.Popen(shlex.split(cmd),stdout=subprocess.PIPE,stderr=subprocess.PIPE,encoding=encoding) # Python 3 with encoding
+ return proc.stdout.read()
+
+ class Tester:
+@@ -137,7 +138,7 @@ def prepare_test(self):
+ print('GENERATE_DOCBOOK=NO', file=f)
+ if (self.args.xhtml):
+ print('GENERATE_HTML=YES', file=f)
+- # HTML_OUTPUT can also be set locally
++ # HTML_OUTPUT can also have been set locally
+ print('HTML_OUTPUT=%s/html' % self.test_out, file=f)
+ print('HTML_FILE_EXTENSION=.xhtml', file=f)
+ if (self.args.pdf):
+@@ -184,7 +185,7 @@ def update_test(self,testmgr):
+ print('Non-existing file %s after \'check:\' statement' % check_file)
+ return
+ # convert output to canonical form
+- data = xpopen('%s --format --noblanks --nowarning %s' % (self.args.xmllint,check_file)).read()
++ data = xpopen('%s --format --noblanks --nowarning %s' % (self.args.xmllint,check_file))
+ if data:
+ # strip version
+ data = re.sub(r'xsd" version="[0-9.-]+"','xsd" version=""',data).rstrip('\n')
+@@ -326,7 +327,7 @@ def perform_test(self,testmgr):
+ tests.append(glob.glob('%s/*.xml' % (docbook_output)))
+ tests.append(glob.glob('%s/*/*/*.xml' % (docbook_output)))
+ tests = ' '.join(list(itertools.chain.from_iterable(tests))).replace(self.args.outputdir +'/','').replace('\\','/')
+- exe_string = '%s --nonet --postvalid %s' % (self.args.xmllint,tests)
++ exe_string = '%s --noout --nonet --postvalid %s' % (self.args.xmllint,tests)
+ exe_string1 = exe_string
+ exe_string += ' %s' % (redirx)
+ exe_string += ' %s more "%s/temp"' % (separ,docbook_output)
+@@ -346,7 +347,11 @@ def perform_test(self,testmgr):
+ redirx=' 2> %s/temp >nul:'%html_output
+ else:
+ redirx='2>%s/temp >/dev/null'%html_output
+- exe_string = '%s --path dtd --nonet --postvalid %s/*xhtml' % (self.args.xmllint,html_output)
++ check_file = []
++ check_file.append(glob.glob('%s/*.xhtml' % (html_output)))
++ check_file.append(glob.glob('%s/*/*/*.xhtml' % (html_output)))
++ check_file = ' '.join(list(itertools.chain.from_iterable(check_file))).replace(self.args.outputdir +'/','').replace('\\','/')
++ exe_string = '%s --noout --path dtd --nonet --postvalid %s' % (self.args.xmllint,check_file)
+ exe_string1 = exe_string
+ exe_string += ' %s' % (redirx)
+ exe_string += ' %s more "%s/temp"' % (separ,html_output)
diff --git a/gnu/packages/patches/doxygen-test.patch b/gnu/packages/patches/doxygen-test.patch
index a2da54a3fa..1c0d4eb946 100644
--- a/gnu/packages/patches/doxygen-test.patch
+++ b/gnu/packages/patches/doxygen-test.patch
@@ -52,9 +52,9 @@ diff -u -r doxygen-1.8.7.orig/testing/012/indexpage.xml doxygen-1.8.7/testing/01
</briefdescription>
<detaileddescription>
- <para>See <ref refid="citelist_1CITEREF_knuth79" kindref="member">[3]</ref> for more info.</para>
-- <para>Oter references with crosreference see <ref refid="citelist_1CITEREF_Be09" kindref="member">[1]</ref> and <ref refid="citelist_1CITEREF_BertholdHeinzVigerske2009" kindref="member">[2]</ref> for more info. </para>
+- <para>Other references with cross references see <ref refid="citelist_1CITEREF_Be09" kindref="member">[1]</ref> and <ref refid="citelist_1CITEREF_BertholdHeinzVigerske2009" kindref="member">[2]</ref> for more info. </para>
+ <para>See knuth79 for more info.</para>
-+ <para>Oter references with crosreference see Be09 and BertholdHeinzVigerske2009 for more info. </para>
++ <para>Other references with cross references see Be09 and BertholdHeinzVigerske2009 for more info. </para>
</detaileddescription>
</compounddef>
</doxygen>